Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yhiI [C]

Identifier: 119773618

GI number: 119773618

Start: 588963

End: 589931

Strand: Direct

Name: yhiI [C]

Synonym: Sama_0478

Alternate gene names: 119773618

Gene position: 588963-589931 (Clockwise)

Preceding gene: 119773617

Following gene: 119773619

Centisome position: 13.68

GC content: 59.65

Gene sequence:

>969_bases
ATGACAGTCAATCGTTTGCTGGCAACGTCTGCACTGGTCGCGCTGGTGATTGCCCTCGGCTGGGGGCTGATGCTGGCTCA
CACTCCTGCCAAGGCCCCGTTGCAGGGGCAAATCGAAGCCCGTGAATACCATGTGTCTTCCAAGGTGCCCGGCCGCATCG
AACAGGTGATGGTGCGCACCGGCGATACAGTGGCGGCAGGGGATTTGCTCTATGTGATTGACAGCCCCGAACTAAATGCC
AAGTTGATGCAGGCCGAAGGGGGCCGGGATGCGGCCCGCGCCATGCAGCTTGAGGCCGACACAGGTGCCCGCAAGCAGCA
GATTGCGGCCCAGAAAGAGCAGTGGCTCAAGGCAAAGGCCGGGTTGGAACTCGCGAAAACCACCTTCGAGCGGGTGGATA
ACCTCTTTAACGAAGGCGTGGTGCCACGGCAAAAACGCGATGAAGCCTATACCCAGTGGCAGGCGGCCAGATATACAGAG
CAGGCGGCACTGGCTGTGTATCAGATGACAGAAGAAGGCGCCCGGGAAGAAACCAAGGCGGCAGCCGCCGGTAATGCCCG
CATGGCCGAGGGCGCTGTGAAAGAAGTGAGTGCCATTCTGGCCGACAGCCAGATGCGCGCACCGCGGGGCGGTGAAGTGT
CGGAAGTGTTGCTGCAATCCGGCGAGCTGGCGCCGTCCGGCTTCCCTGTGGTGAGTCTGGTGGACATGAACGACGCATGG
GCAGTGTTCCAGCTGCGGGAAGACATGCTTAAGGATGTGAAAAAAGGTGAACTGAAACAGCTGTATATTCCAGCACTGGA
TATCAGCGCCGGGTTTAAGGTGAGCCACATAGCTGTGATGGGCGACTTTGCCACCTGGCGCTCCACCGAGAGTGGTCACG
ACTTTGACCTGCGCACCTTCAAGGTGGAGCTGGTGCCCCAGCACCCCATTGAAGGATTGCGGGTTGGCATGTCTGCCATT
TGGGAATGA

Upstream 100 bases:

>100_bases
GTTATGTGCAGGCCTATGCGCGCCTGATGGCCATCTCGGGCCAGTTGGATGAATTTATCGGTCAGGCCCAGCGAGCGTCT
GCCACCATGGGAGAAAAACA

Downstream 100 bases:

>100_bases
ACCATGAAGACCCTGCTGCGCCGTGAGCTTGGTGCACTGTGGCAAAACCCCTGGCAACTGGCGCTGGTAAGTTACCTGCC
CATTCTTGCCATGTTGGCAC

Product: HlyD family secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTVNRLLATSALVALVIALGWGLMLAHTPAKAPLQGQIEAREYHVSSKVPGRIEQVMVRTGDTVAAGDLLYVIDSPELNA
KLMQAEGGRDAARAMQLEADTGARKQQIAAQKEQWLKAKAGLELAKTTFERVDNLFNEGVVPRQKRDEAYTQWQAARYTE
QAALAVYQMTEEGAREETKAAAAGNARMAEGAVKEVSAILADSQMRAPRGGEVSEVLLQSGELAPSGFPVVSLVDMNDAW
AVFQLREDMLKDVKKGELKQLYIPALDISAGFKVSHIAVMGDFATWRSTESGHDFDLRTFKVELVPQHPIEGLRVGMSAI
WE

Sequences:

>Translated_322_residues
MTVNRLLATSALVALVIALGWGLMLAHTPAKAPLQGQIEAREYHVSSKVPGRIEQVMVRTGDTVAAGDLLYVIDSPELNA
KLMQAEGGRDAARAMQLEADTGARKQQIAAQKEQWLKAKAGLELAKTTFERVDNLFNEGVVPRQKRDEAYTQWQAARYTE
QAALAVYQMTEEGAREETKAAAAGNARMAEGAVKEVSAILADSQMRAPRGGEVSEVLLQSGELAPSGFPVVSLVDMNDAW
AVFQLREDMLKDVKKGELKQLYIPALDISAGFKVSHIAVMGDFATWRSTESGHDFDLRTFKVELVPQHPIEGLRVGMSAI
WE
>Mature_321_residues
TVNRLLATSALVALVIALGWGLMLAHTPAKAPLQGQIEAREYHVSSKVPGRIEQVMVRTGDTVAAGDLLYVIDSPELNAK
LMQAEGGRDAARAMQLEADTGARKQQIAAQKEQWLKAKAGLELAKTTFERVDNLFNEGVVPRQKRDEAYTQWQAARYTEQ
AALAVYQMTEEGAREETKAAAAGNARMAEGAVKEVSAILADSQMRAPRGGEVSEVLLQSGELAPSGFPVVSLVDMNDAWA
VFQLREDMLKDVKKGELKQLYIPALDISAGFKVSHIAVMGDFATWRSTESGHDFDLRTFKVELVPQHPIEGLRVGMSAIW
E

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789900, Length=328, Percent_Identity=25.9146341463415, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 35176; Mature: 35044

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVNRLLATSALVALVIALGWGLMLAHTPAKAPLQGQIEAREYHVSSKVPGRIEQVMVRT
CCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEHHEEEECCCCCCHHHHHHHHC
GDTVAAGDLLYVIDSPELNAKLMQAEGGRDAARAMQLEADTGARKQQIAAQKEQWLKAKA
CCEEEECCEEEEECCCCCCEEEEECCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHH
GLELAKTTFERVDNLFNEGVVPRQKRDEAYTQWQAARYTEQAALAVYQMTEEGAREETKA
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AAAGNARMAEGAVKEVSAILADSQMRAPRGGEVSEVLLQSGELAPSGFPVVSLVDMNDAW
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCH
AVFQLREDMLKDVKKGELKQLYIPALDISAGFKVSHIAVMGDFATWRSTESGHDFDLRTF
HHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEECHHHHCCCCCCCCCCEEEE
KVELVPQHPIEGLRVGMSAIWE
EEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TVNRLLATSALVALVIALGWGLMLAHTPAKAPLQGQIEAREYHVSSKVPGRIEQVMVRT
CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEHHEEEECCCCCCHHHHHHHHC
GDTVAAGDLLYVIDSPELNAKLMQAEGGRDAARAMQLEADTGARKQQIAAQKEQWLKAKA
CCEEEECCEEEEECCCCCCEEEEECCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHH
GLELAKTTFERVDNLFNEGVVPRQKRDEAYTQWQAARYTEQAALAVYQMTEEGAREETKA
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AAAGNARMAEGAVKEVSAILADSQMRAPRGGEVSEVLLQSGELAPSGFPVVSLVDMNDAW
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCH
AVFQLREDMLKDVKKGELKQLYIPALDISAGFKVSHIAVMGDFATWRSTESGHDFDLRTF
HHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEECHHHHCCCCCCCCCCEEEE
KVELVPQHPIEGLRVGMSAIWE
EEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]