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The map label for this gene is 119773617

Identifier: 119773617

GI number: 119773617

Start: 587413

End: 588966

Strand: Direct

Name: 119773617

Synonym: Sama_0477

Alternate gene names: NA

Gene position: 587413-588966 (Clockwise)

Preceding gene: 119773614

Following gene: 119773618

Centisome position: 13.64

GC content: 57.27

Gene sequence:

>1554_bases
ATGCTATCATCCGCCACTGGAATTAGAGTTAAAACTCTAGAGGTGTCAATGAAACCTATCACCACACTGGTTTGTCTGCC
AAAAATGGTGTGTTCGTCCCGTCAGCGGACAAAACTTGCGCTTGTTGCGCAAAAGGGCCGTGTTGCTAAATCGGCTCTGT
TTGCGACCGTGCTTGCGTCTTGCGCTGGTATGTCTGTGATAGCCACAGCTGCCCATGCCCAGAGTTTTGATGCGGCCTGG
CAGCAGCTGCAACAGGTTAGCGATAAGCTGGCGGCCTCCAGTGCCAAGGTCGACCGTGCCCGGGCCGAGCGTGACGCCGG
TGAAGACATGAATCTGCCGGAGTTGTCGCTCAATGGCAGCTATACCCGGCTGGAAAAACCGCTGGAGATGGATCTTCGGG
ATCTCAATCCTATGGCGTCTCTCGACCCCGCAAGCCTTCCGCCCGCTTTGGGTGCGGCCCTTGGCAGTATCCCCGGCGAA
CTCTTTATTACTCCTTTCACTGAGCAGGACATTTTCCGTGCAAGCCTGTCGGCGATGTGGCCCATCTATACAGGCGGTCG
CATCAGCGCGGCCCAGGGTATACACGAGGCCCTGCTTGCCGAAGAAGAGCAGCAGCGTGAGCTGACCCGCCGCGAGCTAT
TTACCACTCTGGTGGACAGATACTACGGTGTGATGGTGGCGGCGGAGCTGGTCCGCACCCAGGATAAGTTGGTGGCGTCC
CTCGAGAAACACGTCGATCATGCCCGCAAGCTTGAGGCCCATGGACAAATCGCCAAAGTCGAGCGCCTCAATGCCGAAGT
GGCGCTGGATAACGCCAGAGTGCAGGCCTCCAGTAGTCGTCGTCAGTACGAAATGACCAATATCGCCCTGAAAAGCCTGC
TGAAAAAGGCCGAAACACCTTCATCAGGGCTTTTTATTGCGCTCAGCGAGCCCTCACTGCCACAACTGGCGGAACTGACA
CAAAAGTCACATCCGGCACTCAAGTTACTGGATGCGAAGGAAACCCAGGCCAACGGGCTGATTGAAGTTGAGCGCGGCGC
CTATAAACCGACGGTATTCCTTTACGGCAATTACACCCTGTATGAGGATGACAGCCTGTTCGCGAAAATGGAGCCGGACT
GGATGCTGGGGGTCGGTTTTAAGATGCCGCTGCTCTCCCGCGATGGCCGCAGTGGCAAGGTCGAAGCGGCCCACAGCGCA
CTGTTGCAGGCCCGTCACACCAAGGCACAAACCCGGGAAGACTTGAGTCTGCTGCTGGAGCAGAGCTTTCGACAGCTTAG
GCAGGCCGAAGAAGAATATCGTGCCCTCGACAGCTCGCGGGCGCTGGCGATGGAAAATCTGCGGCTTCGTGAACTTGCCT
TTAACCAGGGCATGTCCACCTCCATCGAGCGGGTGGACGCCGAGCTGAAACTCACCGCCGTGGATACCCAGCAGCTGGGT
GCCAAGTTTCGTTATGTGCAGGCCTATGCGCGCCTGATGGCCATCTCGGGCCAGTTGGATGAATTTATCGGTCAGGCCCA
GCGAGCGTCTGCCACCATGGGAGAAAAACAATGA

Upstream 100 bases:

>100_bases
TTGTGAAAGGCAAGGACTAACTGCATAGGACTGGCACCACTTGCCGGTGTGCGTTACAGGTCACGACCTGGAGCTGCGTA
TTGGTGCCTCAGAGAATGGA

Downstream 100 bases:

>100_bases
CAGTCAATCGTTTGCTGGCAACGTCTGCACTGGTCGCGCTGGTGATTGCCCTCGGCTGGGGGCTGATGCTGGCTCACACT
CCTGCCAAGGCCCCGTTGCA

Product: outer membrane efflux protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Efflux Family Protein; Type I Secretion Outer Membrane Protein; Outer Membrane Macrolide Efflux Protein; RND Family Drug Transporter; Outer Membrane Efflux Protein Domain Protein; Outer Membrane Protein-Like

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MLSSATGIRVKTLEVSMKPITTLVCLPKMVCSSRQRTKLALVAQKGRVAKSALFATVLASCAGMSVIATAAHAQSFDAAW
QQLQQVSDKLAASSAKVDRARAERDAGEDMNLPELSLNGSYTRLEKPLEMDLRDLNPMASLDPASLPPALGAALGSIPGE
LFITPFTEQDIFRASLSAMWPIYTGGRISAAQGIHEALLAEEEQQRELTRRELFTTLVDRYYGVMVAAELVRTQDKLVAS
LEKHVDHARKLEAHGQIAKVERLNAEVALDNARVQASSSRRQYEMTNIALKSLLKKAETPSSGLFIALSEPSLPQLAELT
QKSHPALKLLDAKETQANGLIEVERGAYKPTVFLYGNYTLYEDDSLFAKMEPDWMLGVGFKMPLLSRDGRSGKVEAAHSA
LLQARHTKAQTREDLSLLLEQSFRQLRQAEEEYRALDSSRALAMENLRLRELAFNQGMSTSIERVDAELKLTAVDTQQLG
AKFRYVQAYARLMAISGQLDEFIGQAQRASATMGEKQ

Sequences:

>Translated_517_residues
MLSSATGIRVKTLEVSMKPITTLVCLPKMVCSSRQRTKLALVAQKGRVAKSALFATVLASCAGMSVIATAAHAQSFDAAW
QQLQQVSDKLAASSAKVDRARAERDAGEDMNLPELSLNGSYTRLEKPLEMDLRDLNPMASLDPASLPPALGAALGSIPGE
LFITPFTEQDIFRASLSAMWPIYTGGRISAAQGIHEALLAEEEQQRELTRRELFTTLVDRYYGVMVAAELVRTQDKLVAS
LEKHVDHARKLEAHGQIAKVERLNAEVALDNARVQASSSRRQYEMTNIALKSLLKKAETPSSGLFIALSEPSLPQLAELT
QKSHPALKLLDAKETQANGLIEVERGAYKPTVFLYGNYTLYEDDSLFAKMEPDWMLGVGFKMPLLSRDGRSGKVEAAHSA
LLQARHTKAQTREDLSLLLEQSFRQLRQAEEEYRALDSSRALAMENLRLRELAFNQGMSTSIERVDAELKLTAVDTQQLG
AKFRYVQAYARLMAISGQLDEFIGQAQRASATMGEKQ
>Mature_517_residues
MLSSATGIRVKTLEVSMKPITTLVCLPKMVCSSRQRTKLALVAQKGRVAKSALFATVLASCAGMSVIATAAHAQSFDAAW
QQLQQVSDKLAASSAKVDRARAERDAGEDMNLPELSLNGSYTRLEKPLEMDLRDLNPMASLDPASLPPALGAALGSIPGE
LFITPFTEQDIFRASLSAMWPIYTGGRISAAQGIHEALLAEEEQQRELTRRELFTTLVDRYYGVMVAAELVRTQDKLVAS
LEKHVDHARKLEAHGQIAKVERLNAEVALDNARVQASSSRRQYEMTNIALKSLLKKAETPSSGLFIALSEPSLPQLAELT
QKSHPALKLLDAKETQANGLIEVERGAYKPTVFLYGNYTLYEDDSLFAKMEPDWMLGVGFKMPLLSRDGRSGKVEAAHSA
LLQARHTKAQTREDLSLLLEQSFRQLRQAEEEYRALDSSRALAMENLRLRELAFNQGMSTSIERVDAELKLTAVDTQQLG
AKFRYVQAYARLMAISGQLDEFIGQAQRASATMGEKQ

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56960; Mature: 56960

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSATGIRVKTLEVSMKPITTLVCLPKMVCSSRQRTKLALVAQKGRVAKSALFATVLAS
CCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHH
CAGMSVIATAAHAQSFDAAWQQLQQVSDKLAASSAKVDRARAERDAGEDMNLPELSLNGS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC
YTRLEKPLEMDLRDLNPMASLDPASLPPALGAALGSIPGELFITPFTEQDIFRASLSAMW
HHHHCCCHHCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHC
PIYTGGRISAAQGIHEALLAEEEQQRELTRRELFTTLVDRYYGVMVAAELVRTQDKLVAS
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKHVDHARKLEAHGQIAKVERLNAEVALDNARVQASSSRRQYEMTNIALKSLLKKAETP
HHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCC
SSGLFIALSEPSLPQLAELTQKSHPALKLLDAKETQANGLIEVERGAYKPTVFLYGNYTL
CCCEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCCEEEEEECEEE
YEDDSLFAKMEPDWMLGVGFKMPLLSRDGRSGKVEAAHSALLQARHTKAQTREDLSLLLE
EECCCEEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSFRQLRQAEEEYRALDSSRALAMENLRLRELAFNQGMSTSIERVDAELKLTAVDTQQLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEECHHHHH
AKFRYVQAYARLMAISGQLDEFIGQAQRASATMGEKQ
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLSSATGIRVKTLEVSMKPITTLVCLPKMVCSSRQRTKLALVAQKGRVAKSALFATVLAS
CCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHH
CAGMSVIATAAHAQSFDAAWQQLQQVSDKLAASSAKVDRARAERDAGEDMNLPELSLNGS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC
YTRLEKPLEMDLRDLNPMASLDPASLPPALGAALGSIPGELFITPFTEQDIFRASLSAMW
HHHHCCCHHCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHC
PIYTGGRISAAQGIHEALLAEEEQQRELTRRELFTTLVDRYYGVMVAAELVRTQDKLVAS
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKHVDHARKLEAHGQIAKVERLNAEVALDNARVQASSSRRQYEMTNIALKSLLKKAETP
HHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCC
SSGLFIALSEPSLPQLAELTQKSHPALKLLDAKETQANGLIEVERGAYKPTVFLYGNYTL
CCCEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCCEEEEEECEEE
YEDDSLFAKMEPDWMLGVGFKMPLLSRDGRSGKVEAAHSALLQARHTKAQTREDLSLLLE
EECCCEEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSFRQLRQAEEEYRALDSSRALAMENLRLRELAFNQGMSTSIERVDAELKLTAVDTQQLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEECHHHHH
AKFRYVQAYARLMAISGQLDEFIGQAQRASATMGEKQ
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA