Click here to switch to the map view.

The map label for this gene is 119773603

Identifier: 119773603

GI number: 119773603

Start: 568567

End: 569094

Strand: Direct

Name: 119773603

Synonym: Sama_0463

Alternate gene names: NA

Gene position: 568567-569094 (Clockwise)

Preceding gene: 119773602

Following gene: 119773604

Centisome position: 13.2

GC content: 53.98

Gene sequence:

>528_bases
ATGCCCGCTAGTCTCAGCAAGATGCCGGTGTTATCCAAACGTACAGCGGGATTTACCCTGGTAGAGCTGGTCGTTGGCAT
GTTGGTGCTCGCCATTGCACTGGTATTGCTCTCCAGTATGTTCTTTCCCCAGGCGGACCGGGCGGCCATGACGCTGCAGC
GGGTAAGAAGTGCCGAGCTGGCCCAGTCGGTGCTCAATGAAATCTGGGGAAAAAGGTACGATGAGCACAGCAATATCAAT
GGTGGCGTGCCGGCCTGTGGCTCGCCTTCAGCCTTGGCCTGCAGCACTCACATGGGGCCAGAGGGAGAAAGTCGCAATGA
TTTCGATGATGTGGATGACTACCATGGCTTGAATGAAACTCAGTTTATGCTGAACTCCAGCCAGCGCTATATCGACCGTT
ACCCCGGCTTCAAATTGACCGTGGAGGTCAGCACTTCGTCCCCTTTGGTGAGTAAACTCATCGCCATCCATGTCACTACA
CCTCAAGGGGAAGTAATTACTTACCATGCCGTGAGGAGCAACTACTGA

Upstream 100 bases:

>100_bases
ACCCTCGGCCGACTCCCTGCCACGGGCTGCAACGGCGACTGTATCCTGGCTATTGCCGACGAAACCCTGGTGCTGGCGAT
CGAGTCCGAGGGCTATATTC

Downstream 100 bases:

>100_bases
TGCGCCGCACTGGGATTGGGTTACACGCACGGGGGTTCACCCTGGTGGAATTGGTCACGGTTATCCTGGTGCTGGGGGTA
TTGGCCGTGGGGGTGAGCAG

Product: MSHA pilin protein MshD

Products: NA

Alternate protein names: Methylation Site Containing Protein; MshD Protein; Msha Pilin Protein Mshd; Mannose-Sensitive Agglutinin; Prepilin-Type Cleavage/Methylation-Like; Pilin Protein

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MPASLSKMPVLSKRTAGFTLVELVVGMLVLAIALVLLSSMFFPQADRAAMTLQRVRSAELAQSVLNEIWGKRYDEHSNIN
GGVPACGSPSALACSTHMGPEGESRNDFDDVDDYHGLNETQFMLNSSQRYIDRYPGFKLTVEVSTSSPLVSKLIAIHVTT
PQGEVITYHAVRSNY

Sequences:

>Translated_175_residues
MPASLSKMPVLSKRTAGFTLVELVVGMLVLAIALVLLSSMFFPQADRAAMTLQRVRSAELAQSVLNEIWGKRYDEHSNIN
GGVPACGSPSALACSTHMGPEGESRNDFDDVDDYHGLNETQFMLNSSQRYIDRYPGFKLTVEVSTSSPLVSKLIAIHVTT
PQGEVITYHAVRSNY
>Mature_174_residues
PASLSKMPVLSKRTAGFTLVELVVGMLVLAIALVLLSSMFFPQADRAAMTLQRVRSAELAQSVLNEIWGKRYDEHSNING
GVPACGSPSALACSTHMGPEGESRNDFDDVDDYHGLNETQFMLNSSQRYIDRYPGFKLTVEVSTSSPLVSKLIAIHVTTP
QGEVITYHAVRSNY

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19151; Mature: 19020

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASLSKMPVLSKRTAGFTLVELVVGMLVLAIALVLLSSMFFPQADRAAMTLQRVRSAEL
CCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AQSVLNEIWGKRYDEHSNINGGVPACGSPSALACSTHMGPEGESRNDFDDVDDYHGLNET
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCHH
QFMLNSSQRYIDRYPGFKLTVEVSTSSPLVSKLIAIHVTTPQGEVITYHAVRSNY
HHHHCCHHHHHHHCCCEEEEEEECCCCHHHHHHEEEEEECCCCCEEEEEECCCCC
>Mature Secondary Structure 
PASLSKMPVLSKRTAGFTLVELVVGMLVLAIALVLLSSMFFPQADRAAMTLQRVRSAEL
CCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AQSVLNEIWGKRYDEHSNINGGVPACGSPSALACSTHMGPEGESRNDFDDVDDYHGLNET
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCHH
QFMLNSSQRYIDRYPGFKLTVEVSTSSPLVSKLIAIHVTTPQGEVITYHAVRSNY
HHHHCCHHHHHHHCCCEEEEEEECCCCHHHHHHEEEEEECCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA