Click here to switch to the map view.

The map label for this gene is 119773484

Identifier: 119773484

GI number: 119773484

Start: 412338

End: 413378

Strand: Reverse

Name: 119773484

Synonym: Sama_0343

Alternate gene names: NA

Gene position: 413378-412338 (Counterclockwise)

Preceding gene: 119773485

Following gene: 119773483

Centisome position: 9.6

GC content: 53.51

Gene sequence:

>1041_bases
ATGAACTGGTTAAAGTGGCATCTTTATCTTGCAGCTATGTGCGGTTTGCAAATGCTGTTGTGGCTCGGCTCTGGCCTGAC
GTTGAGTCTGATTGATGAAGATTACCTGGATTCAAATCGTTATCGCGTTGACGCAATACACACACCGATTGGCACAGCAC
TGCATTTCGACCCTGAGAGAATCTCACTGTCCAACGCCGTCACTGAAATACGCCTGGACAACCTGTTATCGCGGCCGGTC
TATCGGGTACAACTTGGCGAACAGAGTATGAGTCTTTGGGCTGACACGCTGGAACCTCTGAAGCTGGATGATACTTTGCT
CCGTGAAATTGCGGCTGCAAGTATCAGTGTGCCACTGACACCCGAGCTGCAATATGTGCGCGGCAATGAGATTGGTTTCC
CCGACTCGGCCAAGGTCGCACTGTTCCAATCCCAAACCGCCAGAGATACCCGCGTGCTGGTCGATGCCGACAGTGGCAAA
CTCCTTGGCCATAAAGACATGGGATCTGACCTTAAAGAGCTGCTGCTGATGCTGCACTTTATGGACTACGCCCCGGGTAA
TGGCATTGCGTTTAACCATATCGGGATCCGCGTTTTTGCGTTACTGACATTGCTGATGGTATTCACAGGCGCTCTGGTCG
TGTGGCAGCGCTGGCAGGCAGGGTTTTATCGTTGGCACAAAGCGGACGATAGAAAAAGCAATCCATGCCTTTTTGTGCTG
GATACCCAAGGCAGCGCACTTGGCCAGTTTTGTGCCGGCCCCTCCTTACTTGAAAGCATTAACGCCGAGCGGCCCCTGCT
GCCAACCCAATGTGGCGGCGGCGGCAGCTGTGGCCTCTGCACTCTGGTGTTTATCGATGCTCCACCCACGGCCACCGAGG
CCGATATCAAACGTCTTGGGAAAAAAGTAGAGCAAGGGCATCGTCTCGCTTGCCAACATGGCACTTATACCGGCCGAGTC
AGGCTCGCTAACAAAGCCCAGGAGCGCTATTGGCATAAGCAGTGTCAGGTATCCGAACCCGCCCGCAACGAAAATGTCTA
A

Upstream 100 bases:

>100_bases
TCGCGTCGTTGCTGGCGTTATTACTGGCTCTAACAGGGGTATTACTGGCATGGCGCAGTTTAAAGCCTGCTCCGGAGCAC
GAAAAACCGGAGACAAAGGC

Downstream 100 bases:

>100_bases
ATATTAGGCAGCAAATGCCGATAACCAGTGCAGGAAGCACAGGAGGCGGGAATGAGTGGATTGGACAGCATATATGCCAT
GTTGGCAAGACCGGTAAAGG

Product: ferredoxin

Products: NA

Alternate protein names: PepSY-Associated TM Helix Domain-Containing Protein

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MNWLKWHLYLAAMCGLQMLLWLGSGLTLSLIDEDYLDSNRYRVDAIHTPIGTALHFDPERISLSNAVTEIRLDNLLSRPV
YRVQLGEQSMSLWADTLEPLKLDDTLLREIAAASISVPLTPELQYVRGNEIGFPDSAKVALFQSQTARDTRVLVDADSGK
LLGHKDMGSDLKELLLMLHFMDYAPGNGIAFNHIGIRVFALLTLLMVFTGALVVWQRWQAGFYRWHKADDRKSNPCLFVL
DTQGSALGQFCAGPSLLESINAERPLLPTQCGGGGSCGLCTLVFIDAPPTATEADIKRLGKKVEQGHRLACQHGTYTGRV
RLANKAQERYWHKQCQVSEPARNENV

Sequences:

>Translated_346_residues
MNWLKWHLYLAAMCGLQMLLWLGSGLTLSLIDEDYLDSNRYRVDAIHTPIGTALHFDPERISLSNAVTEIRLDNLLSRPV
YRVQLGEQSMSLWADTLEPLKLDDTLLREIAAASISVPLTPELQYVRGNEIGFPDSAKVALFQSQTARDTRVLVDADSGK
LLGHKDMGSDLKELLLMLHFMDYAPGNGIAFNHIGIRVFALLTLLMVFTGALVVWQRWQAGFYRWHKADDRKSNPCLFVL
DTQGSALGQFCAGPSLLESINAERPLLPTQCGGGGSCGLCTLVFIDAPPTATEADIKRLGKKVEQGHRLACQHGTYTGRV
RLANKAQERYWHKQCQVSEPARNENV
>Mature_346_residues
MNWLKWHLYLAAMCGLQMLLWLGSGLTLSLIDEDYLDSNRYRVDAIHTPIGTALHFDPERISLSNAVTEIRLDNLLSRPV
YRVQLGEQSMSLWADTLEPLKLDDTLLREIAAASISVPLTPELQYVRGNEIGFPDSAKVALFQSQTARDTRVLVDADSGK
LLGHKDMGSDLKELLLMLHFMDYAPGNGIAFNHIGIRVFALLTLLMVFTGALVVWQRWQAGFYRWHKADDRKSNPCLFVL
DTQGSALGQFCAGPSLLESINAERPLLPTQCGGGGSCGLCTLVFIDAPPTATEADIKRLGKKVEQGHRLACQHGTYTGRV
RLANKAQERYWHKQCQVSEPARNENV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38549; Mature: 38549

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLKWHLYLAAMCGLQMLLWLGSGLTLSLIDEDYLDSNRYRVDAIHTPIGTALHFDPER
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCEEEEEEECCCCCEEECCHHH
ISLSNAVTEIRLDNLLSRPVYRVQLGEQSMSLWADTLEPLKLDDTLLREIAAASISVPLT
HHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
PELQYVRGNEIGFPDSAKVALFQSQTARDTRVLVDADSGKLLGHKDMGSDLKELLLMLHF
CCEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHH
MDYAPGNGIAFNHIGIRVFALLTLLMVFTGALVVWQRWQAGFYRWHKADDRKSNPCLFVL
HHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
DTQGSALGQFCAGPSLLESINAERPLLPTQCGGGGSCGLCTLVFIDAPPTATEADIKRLG
ECCCCHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH
KKVEQGHRLACQHGTYTGRVRLANKAQERYWHKQCQVSEPARNENV
HHHHHCCEEEECCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNWLKWHLYLAAMCGLQMLLWLGSGLTLSLIDEDYLDSNRYRVDAIHTPIGTALHFDPER
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCEEEEEEECCCCCEEECCHHH
ISLSNAVTEIRLDNLLSRPVYRVQLGEQSMSLWADTLEPLKLDDTLLREIAAASISVPLT
HHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
PELQYVRGNEIGFPDSAKVALFQSQTARDTRVLVDADSGKLLGHKDMGSDLKELLLMLHF
CCEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHH
MDYAPGNGIAFNHIGIRVFALLTLLMVFTGALVVWQRWQAGFYRWHKADDRKSNPCLFVL
HHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
DTQGSALGQFCAGPSLLESINAERPLLPTQCGGGGSCGLCTLVFIDAPPTATEADIKRLG
ECCCCHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH
KKVEQGHRLACQHGTYTGRVRLANKAQERYWHKQCQVSEPARNENV
HHHHHCCEEEECCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA