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The map label for this gene is ykoG [H]

Identifier: 119773288

GI number: 119773288

Start: 168261

End: 168920

Strand: Direct

Name: ykoG [H]

Synonym: Sama_0146

Alternate gene names: 119773288

Gene position: 168261-168920 (Clockwise)

Preceding gene: 119773287

Following gene: 119773289

Centisome position: 3.91

GC content: 54.55

Gene sequence:

>660_bases
GTGAAAATTCTGCTGGTTGAAGACAACACGGACATAGCCGCATCTCTGGCTGAAGAGTTATCAGATAACGATTGGGACTT
TGCTATCAATGGCTTGCAGGGATTCCGATTGGCTCAGACGCACCATTATGATTTGATTTTGCTGGATCTTAATCTGCCCG
GGATGGATGGTCTGGTGCTGTGCAGTCGCCTGCGCGAGGCCGGGGTCAATACCCCCATCATCATACTGACGGCCCGGGAT
ACCCGTGAAGACCTGCTTGCCGGGCTCAGCGCCGGCGCTGATGATTACCTGGTTAAGCCCTTCGATTTGGATGAACTGCG
CTTACGCATCGGCGCCGTGGTGCGCCGCTGCTCGGGTCAGGGCTTTTCCCAAGCCTTAACCTATAAAGACATAAAGCTGG
ATTTGCGCAGCCACAAGGTCTTCAGGTCTGGTGTAGAGCTGCTGTTGCCCCCGGTGTGTTTTGCATTGCTCACCTGCCTG
ATGCGCCATCCGGGCAAGTTACTTGGCCGCGAAGAGCTGGAACGTGTGCTCTGGCCAGAGGGGCCGCCTGATGACGATAT
TCTGCGCAAACACATTTACCTGCTCAGGCAAAAACTCGACAAACCCTTTCCCGAGAAACGCATCCATACCCAGGCCCGCA
AAGGATATCGTTTGTTGTGA

Upstream 100 bases:

>100_bases
TTTCAAAGGCCGCCAAGGAAGCCCTCATCAGCCCAGTGGCTCCGGGGAACCCGGCGCCGGGAAAGTTATCTAATCCGAAA
AAGGCGGTTGAGGTTTTTGG

Downstream 100 bases:

>100_bases
ATCCCGGTATTGAGCAGAAGATCAATCGCAGTTTTATGATTGGCGCAGCGGTGCTCCTTGGCTGTTACGCGCTCTTGATT
GAATTCGGCATTCATGCGCT

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKILLVEDNTDIAASLAEELSDNDWDFAINGLQGFRLAQTHHYDLILLDLNLPGMDGLVLCSRLREAGVNTPIIILTARD
TREDLLAGLSAGADDYLVKPFDLDELRLRIGAVVRRCSGQGFSQALTYKDIKLDLRSHKVFRSGVELLLPPVCFALLTCL
MRHPGKLLGREELERVLWPEGPPDDDILRKHIYLLRQKLDKPFPEKRIHTQARKGYRLL

Sequences:

>Translated_219_residues
MKILLVEDNTDIAASLAEELSDNDWDFAINGLQGFRLAQTHHYDLILLDLNLPGMDGLVLCSRLREAGVNTPIIILTARD
TREDLLAGLSAGADDYLVKPFDLDELRLRIGAVVRRCSGQGFSQALTYKDIKLDLRSHKVFRSGVELLLPPVCFALLTCL
MRHPGKLLGREELERVLWPEGPPDDDILRKHIYLLRQKLDKPFPEKRIHTQARKGYRLL
>Mature_219_residues
MKILLVEDNTDIAASLAEELSDNDWDFAINGLQGFRLAQTHHYDLILLDLNLPGMDGLVLCSRLREAGVNTPIIILTARD
TREDLLAGLSAGADDYLVKPFDLDELRLRIGAVVRRCSGQGFSQALTYKDIKLDLRSHKVFRSGVELLLPPVCFALLTCL
MRHPGKLLGREELERVLWPEGPPDDDILRKHIYLLRQKLDKPFPEKRIHTQARKGYRLL

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=40.1785714285714, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=38.0090497737557, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI87082012, Length=222, Percent_Identity=37.3873873873874, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=38.7387387387387, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=33.7719298245614, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=35.8744394618834, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=31.5315315315315, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789809, Length=180, Percent_Identity=37.2222222222222, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1788394, Length=204, Percent_Identity=34.3137254901961, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1787229, Length=224, Percent_Identity=30.8035714285714, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=28.9473684210526, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=30.316742081448, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI2367329, Length=217, Percent_Identity=32.7188940092166, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=38.5321100917431, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI1788713, Length=87, Percent_Identity=39.0804597701149, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1788191, Length=121, Percent_Identity=30.5785123966942, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=28.0172413793103, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1788521, Length=106, Percent_Identity=38.6792452830189, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24847; Mature: 24847

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLVEDNTDIAASLAEELSDNDWDFAINGLQGFRLAQTHHYDLILLDLNLPGMDGLVL
CEEEEEECCCHHHHHHHHHHCCCCCCEEECCCCCCEEEECCCCEEEEEEECCCCCCHHHH
CSRLREAGVNTPIIILTARDTREDLLAGLSAGADDYLVKPFDLDELRLRIGAVVRRCSGQ
HHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHCCC
GFSQALTYKDIKLDLRSHKVFRSGVELLLPPVCFALLTCLMRHPGKLLGREELERVLWPE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCC
GPPDDDILRKHIYLLRQKLDKPFPEKRIHTQARKGYRLL
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKILLVEDNTDIAASLAEELSDNDWDFAINGLQGFRLAQTHHYDLILLDLNLPGMDGLVL
CEEEEEECCCHHHHHHHHHHCCCCCCEEECCCCCCEEEECCCCEEEEEEECCCCCCHHHH
CSRLREAGVNTPIIILTARDTREDLLAGLSAGADDYLVKPFDLDELRLRIGAVVRRCSGQ
HHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHCCC
GFSQALTYKDIKLDLRSHKVFRSGVELLLPPVCFALLTCLMRHPGKLLGREELERVLWPE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCC
GPPDDDILRKHIYLLRQKLDKPFPEKRIHTQARKGYRLL
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]