Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773276

Identifier: 119773276

GI number: 119773276

Start: 151023

End: 151580

Strand: Direct

Name: 119773276

Synonym: Sama_0134

Alternate gene names: NA

Gene position: 151023-151580 (Clockwise)

Preceding gene: 119773275

Following gene: 119773277

Centisome position: 3.51

GC content: 60.57

Gene sequence:

>558_bases
ATGAAGACTGAATTGGGTTTACAACAGGCGCTGTTTATCGGCTTCTGTGCTGCCCTGATGATTGCCCTCAAGAGCATGTT
GAGGCTCAAACTGGGGTTATCCGGTCACTCCATGCTGCTGATGAGCTTTTTCTACCTGCTTTGTCACCTGGTGGTGGCGC
GTCCCGGCGCCATGCTGGCCTGCGGCATGCTGTCTGGGCTGCTCGCGATGATGCTGGGTGTGGGTAAATCGGGTGTGTTG
CTGCTGGTGAAATTTGGCGCGCCTGCGGCGGCCATGGAGCTGATGGCGTTGATGTTGCCTGCCATCAAGCCCGGCAATCG
CATGGCCGGGCTTTACCTGCGCCTTGGCCTGCTGGCGTTTGCCGGTGCGCTGGCCTGGGGCCTCAGGGATGTGGCGGGTA
CCTTGCTCGCGGGTATGGCGCTGCCTGCCGCCTTACTGGCCGGTGCCATGGAGTTTGCCGGTGGATTTGTGTTTGCCCTG
CTGGGCGCAGCCCTTATTCCGCCGGTTATCCGGCGCCTCAAGGCCCATGATCTTATTGCTTCGTCGGAGGAACCCTGA

Upstream 100 bases:

>100_bases
GAATTGTTGAAATTATCCCGGCGTCAGGCACTGGCTGCGAAGAGTCGCGGTTTTGGTCAGAGTGCCAATCCCAGTCACTG
GCCCCATAGAGGAAAGCAAT

Downstream 100 bases:

>100_bases
TGTCGACTTTGCCCCAATACCTCATTGCCATTGATGACACAGACGATATCGGCACCCGTGGCACGGGGGACATAGCCCAG
CAGCTTGGAGAGATACTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKTELGLQQALFIGFCAALMIALKSMLRLKLGLSGHSMLLMSFFYLLCHLVVARPGAMLACGMLSGLLAMMLGVGKSGVL
LLVKFGAPAAAMELMALMLPAIKPGNRMAGLYLRLGLLAFAGALAWGLRDVAGTLLAGMALPAALLAGAMEFAGGFVFAL
LGAALIPPVIRRLKAHDLIASSEEP

Sequences:

>Translated_185_residues
MKTELGLQQALFIGFCAALMIALKSMLRLKLGLSGHSMLLMSFFYLLCHLVVARPGAMLACGMLSGLLAMMLGVGKSGVL
LLVKFGAPAAAMELMALMLPAIKPGNRMAGLYLRLGLLAFAGALAWGLRDVAGTLLAGMALPAALLAGAMEFAGGFVFAL
LGAALIPPVIRRLKAHDLIASSEEP
>Mature_185_residues
MKTELGLQQALFIGFCAALMIALKSMLRLKLGLSGHSMLLMSFFYLLCHLVVARPGAMLACGMLSGLLAMMLGVGKSGVL
LLVKFGAPAAAMELMALMLPAIKPGNRMAGLYLRLGLLAFAGALAWGLRDVAGTLLAGMALPAALLAGAMEFAGGFVFAL
LGAALIPPVIRRLKAHDLIASSEEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19211; Mature: 19211

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
8.1 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
8.1 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTELGLQQALFIGFCAALMIALKSMLRLKLGLSGHSMLLMSFFYLLCHLVVARPGAMLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
CGMLSGLLAMMLGVGKSGVLLLVKFGAPAAAMELMALMLPAIKPGNRMAGLYLRLGLLAF
HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AGALAWGLRDVAGTLLAGMALPAALLAGAMEFAGGFVFALLGAALIPPVIRRLKAHDLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSEEP
CCCCC
>Mature Secondary Structure
MKTELGLQQALFIGFCAALMIALKSMLRLKLGLSGHSMLLMSFFYLLCHLVVARPGAMLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
CGMLSGLLAMMLGVGKSGVLLLVKFGAPAAAMELMALMLPAIKPGNRMAGLYLRLGLLAF
HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AGALAWGLRDVAGTLLAGMALPAALLAGAMEFAGGFVFALLGAALIPPVIRRLKAHDLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSEEP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA