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The map label for this gene is yibN [H]

Identifier: 119773203

GI number: 119773203

Start: 66964

End: 67356

Strand: Direct

Name: yibN [H]

Synonym: Sama_0061

Alternate gene names: 119773203

Gene position: 66964-67356 (Clockwise)

Preceding gene: 119773198

Following gene: 119773204

Centisome position: 1.56

GC content: 49.62

Gene sequence:

>393_bases
ATGCTCAGCCTGGCTTGGCTGGGTCTGTTTTTGGCTGTGGTGATTACAACCGTTAAGTCTATGACTTCCAAGGTGAAGCA
CATCAGCACCCAGGAGCTGGTTCAGCTGGTTAACAAACAAAATGCCAAGGTGGTAGACGTTCGCGGTAAAGAAGAATTCC
GCAAAGGTCATATCGTCGATGCGATGAACATCAGCATGTCAGAAATCAAAAATAATCAGATTTCTGCCCTTGAAAGCGCC
AAGAAGAGCCCCATTATATTGGTATGCAACGCTGGCATGACGTCTGCTCAGGCGGCGCAGTTGCTGGTTGCTCAAGGTTT
TGAGCAGGTATACAGCCTCAAAGGCGGTATGGGTGACTGGCAAGCGGCCAACCTGCCGGTAAAGAAGCGCTAA

Upstream 100 bases:

>100_bases
TCTGGTGTCTTGATGGTATACTCACTGCCCACATTGTTTCAGGTATCCTTACAGACGGAATATCATGCAAGAATACATCG
AGTTTTTCAGGGCAAACCCC

Downstream 100 bases:

>100_bases
GCACTGCACCACAGGTTGTTTGGGGAGCGACACTGACGTCGCTCTCGCGGGTACATCCGTTACCCTTTTAGTCGGCGAAG
GCTTTTGAAGTTTTTTTAGC

Product: rhodanese-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MLSLAWLGLFLAVVITTVKSMTSKVKHISTQELVQLVNKQNAKVVDVRGKEEFRKGHIVDAMNISMSEIKNNQISALESA
KKSPIILVCNAGMTSAQAAQLLVAQGFEQVYSLKGGMGDWQAANLPVKKR

Sequences:

>Translated_130_residues
MLSLAWLGLFLAVVITTVKSMTSKVKHISTQELVQLVNKQNAKVVDVRGKEEFRKGHIVDAMNISMSEIKNNQISALESA
KKSPIILVCNAGMTSAQAAQLLVAQGFEQVYSLKGGMGDWQAANLPVKKR
>Mature_130_residues
MLSLAWLGLFLAVVITTVKSMTSKVKHISTQELVQLVNKQNAKVVDVRGKEEFRKGHIVDAMNISMSEIKNNQISALESA
KKSPIILVCNAGMTSAQAAQLLVAQGFEQVYSLKGGMGDWQAANLPVKKR

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=127, Percent_Identity=46.4566929133858, Blast_Score=124, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 14169; Mature: 14169

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLAWLGLFLAVVITTVKSMTSKVKHISTQELVQLVNKQNAKVVDVRGKEEFRKGHIVD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCHHHHHCCCCCH
AMNISMSEIKNNQISALESAKKSPIILVCNAGMTSAQAAQLLVAQGFEQVYSLKGGMGDW
HHCCCHHHHCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
QAANLPVKKR
CCCCCCCCCC
>Mature Secondary Structure
MLSLAWLGLFLAVVITTVKSMTSKVKHISTQELVQLVNKQNAKVVDVRGKEEFRKGHIVD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCHHHHHCCCCCH
AMNISMSEIKNNQISALESAKKSPIILVCNAGMTSAQAAQLLVAQGFEQVYSLKGGMGDW
HHCCCHHHHCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
QAANLPVKKR
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]