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The map label for this gene is yibP [H]

Identifier: 119773201

GI number: 119773201

Start: 64007

End: 65143

Strand: Reverse

Name: yibP [H]

Synonym: Sama_0059

Alternate gene names: 119773201

Gene position: 65143-64007 (Counterclockwise)

Preceding gene: 119773202

Following gene: 119773200

Centisome position: 1.51

GC content: 52.95

Gene sequence:

>1137_bases
TTGTCACAGCACTTACTGTGGAAAGCCGGCGTAATCGCTGGCTTTCTTTTGCTATCACCGCCGCTCCAGGCCGATGATCT
GGCGCGGCGTCAGGCCGAGCTTAAATCACTGCAAAGTCAGATAGCCAAACAACAAAGTGCACTCAAAGACACCAGTAAAC
AGCGGGAAAAGTTGCTGGGACTGCTTAAAGAGGATGAGCAGGCCATCGCCAACGTCGCCAAGGCAATGGCAATCACCCAA
GCTAATCTCAAAGCCGTCGACGGTAAGCTTGATGGCCTCAAGAGCCGCAGTAAAACCCTCAACGCTCAGAAAGCCACCCA
GCAGGAGACTCTCTCCAAACAACTGGCGAGTGCCTACCTTGCCGGGAACCACGACTACACCAAGATGCTGCTGAGCCAGC
AAAACCCCGCCACCATAGAGCGCATGCTGGCCTATTACCAGTACCTCAATAACGCCCGCATCAAGGCCATCAATGAGCTG
AAACAGACCATGGATGAGCTGAGACAAAACCATGCACAGCAGCTTGATGAGCAAGAAAAGCTCAGTCAGCTGGCCATTGA
GCAGCAAGCTCAGGTGAAAAAGCTCGAGTCAGAGCAGGCTCAGCGCCAGGCAACACTGAAAGAGCTGCAAAAAACCTTAA
GCTCTCGGGGCGCTGAACTGGAGCAATTGCAAATAGAAGAGGCCAGCCTTAAACGGGTATTGGAACAGGCTGTAAAAGCA
GTTAAGGCGAGCCCTAAGCTGATAGGCCTGGGTAACCAGCGTGGCAAACTGAACTGGCCAACCAAGGGACGTTTAAGTGA
AGCCTTTGGCAATACCCGTTCGGGACAAATCAAATGGAAAGGCGTGCTGCTCTCTGCGCCGGAAGGACAGAGCATAAACG
CAATTGCAGATGGAAAAGTCATATACGCCGACTGGCTAAAAGGTTTTGGTATGGTATTGGTACTTGATCACGGCCAGGGC
TACATGAGCCTTTATGGCCATGCTCAGGCGCTGCTTAAAAGCCCTGGGGACACGGTCAACAGCGGCGAAACCATCGCACT
GGTAGGACGTTCCGGTGGTCAAACTCAGCCTGGCCTATACTTTGAAATAAGGCACAAGGGGCAGGCTGTCGACCCGGCAA
ACTACTGCAGGCGTTGA

Upstream 100 bases:

>100_bases
GTCTGAGCGACATCGCACCCACCATGCTGAACCTTATGGGACAGGACATTCCGGCAGAAATGACCGGTCGTGTGCTCATC
ACCATCAAAGAGTAAGCCAT

Downstream 100 bases:

>100_bases
TATCAGGCTCCCACTGAACAGGGGGCCTTTATGAAGCAGTTCATCCGTTATCTCGGCGCGACGGTGTTCGGTTTGGCGCT
GGGCATTTCCGTAAGCCTCT

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MSQHLLWKAGVIAGFLLLSPPLQADDLARRQAELKSLQSQIAKQQSALKDTSKQREKLLGLLKEDEQAIANVAKAMAITQ
ANLKAVDGKLDGLKSRSKTLNAQKATQQETLSKQLASAYLAGNHDYTKMLLSQQNPATIERMLAYYQYLNNARIKAINEL
KQTMDELRQNHAQQLDEQEKLSQLAIEQQAQVKKLESEQAQRQATLKELQKTLSSRGAELEQLQIEEASLKRVLEQAVKA
VKASPKLIGLGNQRGKLNWPTKGRLSEAFGNTRSGQIKWKGVLLSAPEGQSINAIADGKVIYADWLKGFGMVLVLDHGQG
YMSLYGHAQALLKSPGDTVNSGETIALVGRSGGQTQPGLYFEIRHKGQAVDPANYCRR

Sequences:

>Translated_378_residues
MSQHLLWKAGVIAGFLLLSPPLQADDLARRQAELKSLQSQIAKQQSALKDTSKQREKLLGLLKEDEQAIANVAKAMAITQ
ANLKAVDGKLDGLKSRSKTLNAQKATQQETLSKQLASAYLAGNHDYTKMLLSQQNPATIERMLAYYQYLNNARIKAINEL
KQTMDELRQNHAQQLDEQEKLSQLAIEQQAQVKKLESEQAQRQATLKELQKTLSSRGAELEQLQIEEASLKRVLEQAVKA
VKASPKLIGLGNQRGKLNWPTKGRLSEAFGNTRSGQIKWKGVLLSAPEGQSINAIADGKVIYADWLKGFGMVLVLDHGQG
YMSLYGHAQALLKSPGDTVNSGETIALVGRSGGQTQPGLYFEIRHKGQAVDPANYCRR
>Mature_377_residues
SQHLLWKAGVIAGFLLLSPPLQADDLARRQAELKSLQSQIAKQQSALKDTSKQREKLLGLLKEDEQAIANVAKAMAITQA
NLKAVDGKLDGLKSRSKTLNAQKATQQETLSKQLASAYLAGNHDYTKMLLSQQNPATIERMLAYYQYLNNARIKAINELK
QTMDELRQNHAQQLDEQEKLSQLAIEQQAQVKKLESEQAQRQATLKELQKTLSSRGAELEQLQIEEASLKRVLEQAVKAV
KASPKLIGLGNQRGKLNWPTKGRLSEAFGNTRSGQIKWKGVLLSAPEGQSINAIADGKVIYADWLKGFGMVLVLDHGQGY
MSLYGHAQALLKSPGDTVNSGETIALVGRSGGQTQPGLYFEIRHKGQAVDPANYCRR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=409, Percent_Identity=34.4743276283619, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI1789099, Length=118, Percent_Identity=38.9830508474576, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI87082174, Length=118, Percent_Identity=33.0508474576271, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI87081989, Length=131, Percent_Identity=32.0610687022901, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 41691; Mature: 41560

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEEECCCCCCCHHHHHCC
>Mature Secondary Structure 
SQHLLWKAGVIAGFLLLSPPLQADDLARRQAELKSLQSQIAKQQSALKDTSKQREKLLG
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKEDEQAIANVAKAMAITQANLKAVDGKLDGLKSRSKTLNAQKATQQETLSKQLASAYL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AGNHDYTKMLLSQQNPATIERMLAYYQYLNNARIKAINELKQTMDELRQNHAQQLDEQEK
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LSQLAIEQQAQVKKLESEQAQRQATLKELQKTLSSRGAELEQLQIEEASLKRVLEQAVKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VKASPKLIGLGNQRGKLNWPTKGRLSEAFGNTRSGQIKWKGVLLSAPEGQSINAIADGKV
HHCCCCEEECCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCEEECCCE
IYADWLKGFGMVLVLDHGQGYMSLYGHAQALLKSPGDTVNSGETIALVGRSGGQTQPGLY
EEHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEE
FEIRHKGQAVDPANYCRR
EEEECCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]