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The map label for this gene is yibQ [H]

Identifier: 119773199

GI number: 119773199

Start: 62006

End: 62758

Strand: Reverse

Name: yibQ [H]

Synonym: Sama_0057

Alternate gene names: 119773199

Gene position: 62758-62006 (Counterclockwise)

Preceding gene: 119773200

Following gene: 119773196

Centisome position: 1.46

GC content: 50.73

Gene sequence:

>753_bases
GTGCGCTATTTGATTGGTTTGCTGCTTGCAGCAGGTATGTTTACAGCCCATGGGGCACAACTGGCTATCATCATCGACGA
TATCGGTTATCGTCATACCGATGAGGATGTCCTGTCACTTCCAAAAGATATTACCCTTTCCGTAATCCCATCGAGCCCCC
TCGGCGTCAAACTTGCCAGTAAAGGACATCAAAGGGGCCACGAGATCATGCTCCACCTCCCCATGCAATCATTGAACGCC
AGACCTTTGGGTCAGGGCGGGCTTACCAGTGATATGGATGAACAGGAAATCAAGCGCAAAGTGGATGATGCCATGGTGAG
AATTCCCTTTGCCAAGGGGGCAAATAACCACATGGGTAGCATGTTGACACAGCTCGACAGCCATATGCTGTGGGTGATGG
AGCGGCTGAAACACAACAATTTGTATTTTGTCGACAGCTTAACGACCAGGTACAGCAAGGCCGGGGCTAAAGCCGAACAG
GTGGGAGTGCCTTTACTTAAACGCCACGTGTTTCTCGATAATGACACCAGTAAACGCGGCCTGGAAAAGCAATTCAAACT
TATGATGGAGCAGGCTCACCAGCAGGGATTTGTAGTGGCTATCGCTCACCCTCATCCCGCAACGGTAAAATTCCTCAATG
CCAACCTACACCGGCTCCGGGATGAAGGGATAAATCTGGTACCTACGTCTGAGCTGCTGCCATATCGCCTCGCCCAGAAG
CAAGGGACTAGCCCAGCTGTAAGATTGAAATAG

Upstream 100 bases:

>100_bases
CGGCTCAGAACAACGTAAAACACAACTTGAAGATCAGACCTTGGCATCGGCCATCGCCTGGATTGAAAACCAAAAATAAC
TACATAATAACGATAACTTA

Downstream 100 bases:

>100_bases
TCGAGTCCGGCAACAACGCCAACAGTTCATCCCTGTTTGTCACTATATCCGCCAACTGGTACTGATCCAGCACCGCCAGA
TATGCCTGCACCGCATTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MRYLIGLLLAAGMFTAHGAQLAIIIDDIGYRHTDEDVLSLPKDITLSVIPSSPLGVKLASKGHQRGHEIMLHLPMQSLNA
RPLGQGGLTSDMDEQEIKRKVDDAMVRIPFAKGANNHMGSMLTQLDSHMLWVMERLKHNNLYFVDSLTTRYSKAGAKAEQ
VGVPLLKRHVFLDNDTSKRGLEKQFKLMMEQAHQQGFVVAIAHPHPATVKFLNANLHRLRDEGINLVPTSELLPYRLAQK
QGTSPAVRLK

Sequences:

>Translated_250_residues
MRYLIGLLLAAGMFTAHGAQLAIIIDDIGYRHTDEDVLSLPKDITLSVIPSSPLGVKLASKGHQRGHEIMLHLPMQSLNA
RPLGQGGLTSDMDEQEIKRKVDDAMVRIPFAKGANNHMGSMLTQLDSHMLWVMERLKHNNLYFVDSLTTRYSKAGAKAEQ
VGVPLLKRHVFLDNDTSKRGLEKQFKLMMEQAHQQGFVVAIAHPHPATVKFLNANLHRLRDEGINLVPTSELLPYRLAQK
QGTSPAVRLK
>Mature_250_residues
MRYLIGLLLAAGMFTAHGAQLAIIIDDIGYRHTDEDVLSLPKDITLSVIPSSPLGVKLASKGHQRGHEIMLHLPMQSLNA
RPLGQGGLTSDMDEQEIKRKVDDAMVRIPFAKGANNHMGSMLTQLDSHMLWVMERLKHNNLYFVDSLTTRYSKAGAKAEQ
VGVPLLKRHVFLDNDTSKRGLEKQFKLMMEQAHQQGFVVAIAHPHPATVKFLNANLHRLRDEGINLVPTSELLPYRLAQK
QGTSPAVRLK

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=217, Percent_Identity=41.0138248847926, Blast_Score=170, Evalue=7e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 27878; Mature: 27878

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLIGLLLAAGMFTAHGAQLAIIIDDIGYRHTDEDVLSLPKDITLSVIPSSPLGVKLAS
CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHCCCCCEEEEECCCCCCEEECC
KGHQRGHEIMLHLPMQSLNARPLGQGGLTSDMDEQEIKRKVDDAMVRIPFAKGANNHMGS
CCCCCCCEEEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCHHHH
MLTQLDSHMLWVMERLKHNNLYFVDSLTTRYSKAGAKAEQVGVPLLKRHVFLDNDTSKRG
HHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCHHHHCCHHHHHEEEECCCCCHHH
LEKQFKLMMEQAHQQGFVVAIAHPHPATVKFLNANLHRLRDEGINLVPTSELLPYRLAQK
HHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHCCCCEEECHHHHHHHHHHH
QGTSPAVRLK
CCCCCCEEEC
>Mature Secondary Structure
MRYLIGLLLAAGMFTAHGAQLAIIIDDIGYRHTDEDVLSLPKDITLSVIPSSPLGVKLAS
CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHCCCCCEEEEECCCCCCEEECC
KGHQRGHEIMLHLPMQSLNARPLGQGGLTSDMDEQEIKRKVDDAMVRIPFAKGANNHMGS
CCCCCCCEEEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCHHHH
MLTQLDSHMLWVMERLKHNNLYFVDSLTTRYSKAGAKAEQVGVPLLKRHVFLDNDTSKRG
HHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCHHHHCCHHHHHEEEECCCCCHHH
LEKQFKLMMEQAHQQGFVVAIAHPHPATVKFLNANLHRLRDEGINLVPTSELLPYRLAQK
HHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHCCCCEEECHHHHHHHHHHH
QGTSPAVRLK
CCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]