| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is yeiW [C]
Identifier: 119773197
GI number: 119773197
Start: 61309
End: 61560
Strand: Direct
Name: yeiW [C]
Synonym: Sama_0055
Alternate gene names: 119773197
Gene position: 61309-61560 (Clockwise)
Preceding gene: 119773195
Following gene: 119773198
Centisome position: 1.42
GC content: 53.57
Gene sequence:
>252_bases GTGGAATGTCGTTTGGGTTGTGGTGCCTGCTGTATCGCCCCCTCTATCAGTAGCCCCATTCCGGGGATGCCTGATGGTAA GCCCGCTGGTGTGCGTTGTGTTCAGCTAAGCGATGACAACCTGTGCCTTATCTTCGGCCACGCCGACAGGCCTGACGTCT GTTGTGACTTTAAAGCCACGAGAGATGTATGTGGCAGCAACAATGCCGAAGCACTTTGGATTATTACTTCCCTCGAGACA CAAACCAGCTGA
Upstream 100 bases:
>100_bases GCTTTACCGCTCGATTATTTCAATTGCGTGCGGCAGTTGGCACTATTGCGGTTCAGAACTGAGTGAATTTGCTTTCATCG GTATAATCGGAGAAACGGAA
Downstream 100 bases:
>100_bases TTGTAGGTGAGCTAAATGCAACTGACCCGCTATACGGATTTTGGGATTCGCACCCTGATGTATATGGCTGTTCAACCTGA GCGGACAGCCCTGTTCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MECRLGCGACCIAPSISSPIPGMPDGKPAGVRCVQLSDDNLCLIFGHADRPDVCCDFKATRDVCGSNNAEALWIITSLET QTS
Sequences:
>Translated_83_residues MECRLGCGACCIAPSISSPIPGMPDGKPAGVRCVQLSDDNLCLIFGHADRPDVCCDFKATRDVCGSNNAEALWIITSLET QTS >Mature_83_residues MECRLGCGACCIAPSISSPIPGMPDGKPAGVRCVQLSDDNLCLIFGHADRPDVCCDFKATRDVCGSNNAEALWIITSLET QTS
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0153 family [H]
Homologues:
Organism=Escherichia coli, GI87082060, Length=83, Percent_Identity=53.0120481927711, Blast_Score=93, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005358 [H]
Pfam domain/function: PF03692 UPF0153 [H]
EC number: NA
Molecular weight: Translated: 8747; Mature: 8747
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 13.3 %Cys+Met (Translated Protein) 10.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 13.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECRLGCGACCIAPSISSPIPGMPDGKPAGVRCVQLSDDNLCLIFGHADRPDVCCDFKAT CCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEECCCCC RDVCGSNNAEALWIITSLETQTS CHHCCCCCCCEEEEEEECCCCCC >Mature Secondary Structure MECRLGCGACCIAPSISSPIPGMPDGKPAGVRCVQLSDDNLCLIFGHADRPDVCCDFKAT CCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEECCCCC RDVCGSNNAEALWIITSLETQTS CHHCCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]