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The map label for this gene is yrdA [H]

Identifier: 119773196

GI number: 119773196

Start: 55153

End: 55701

Strand: Reverse

Name: yrdA [H]

Synonym: Sama_0054

Alternate gene names: 119773196

Gene position: 55701-55153 (Counterclockwise)

Preceding gene: 119773199

Following gene: 119773193

Centisome position: 1.29

GC content: 51.91

Gene sequence:

>549_bases
ATGTCAAAGGCTCTGAGATCCTATAAAGGAATGGCACCTAAACTGGGTGCGAATGTGTATATAGATGAAGCCTGCGTGCT
GGTTGGTGACATTGAACTGGGTGATGATGCCAGCGTTTGGCCCATGGTTGCTGCCCGTGGCGACGTGAATCATATCCGTA
TTGGTAAAAGAAGCAGCATTCAGGACGGCACCATTTTACACGTCACCCGTAAGACTCCCGCCAAGCCAGAGGGGCACCCA
CTGATTATTGGTGATGATGTGACCGTGGGCCACAAGGCTATGCTGCATGGCTGCACCGTGGGCAATCGGGTATTGATAGG
TATGGGTGCGATTGTATTAGATGGCGCCCACGTCTGTGACGATGTGATTTTGGGTGCAGGCTCTTTGGTGCCACCCGGTA
AGGTATTGGAGAGTGGTTATCTTTACGTAGGCAGCCCGGCCAAACAAGCCAGGCCGCTGACCGAAGCTGAACTTAAATTT
CTGCCTCAGTCAGCCCAAAACTATGTGTTGCTGAAAGAGGAGTATCTGCAGGAGCAGGCTTCCGCTTAA

Upstream 100 bases:

>100_bases
AAGTTTTTTTGTTTTTTCACCTCGTTTGCGGGAAAAACGACCTGACCTGCCGATTTTCCGGCCTTATAATGCGAAAAAAC
TGCCATTTAGTGAGATTTTT

Downstream 100 bases:

>100_bases
AGCTCTATCCGCCCCCACTCATCGAAGGCATCTTCTTCGATGAGTGACTCGGCCATCTCTTCCACCTCAAAACGCACACT
TTCGAGTAAAGCAGCAGCGT

Product: carbonic anhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSKALRSYKGMAPKLGANVYIDEACVLVGDIELGDDASVWPMVAARGDVNHIRIGKRSSIQDGTILHVTRKTPAKPEGHP
LIIGDDVTVGHKAMLHGCTVGNRVLIGMGAIVLDGAHVCDDVILGAGSLVPPGKVLESGYLYVGSPAKQARPLTEAELKF
LPQSAQNYVLLKEEYLQEQASA

Sequences:

>Translated_182_residues
MSKALRSYKGMAPKLGANVYIDEACVLVGDIELGDDASVWPMVAARGDVNHIRIGKRSSIQDGTILHVTRKTPAKPEGHP
LIIGDDVTVGHKAMLHGCTVGNRVLIGMGAIVLDGAHVCDDVILGAGSLVPPGKVLESGYLYVGSPAKQARPLTEAELKF
LPQSAQNYVLLKEEYLQEQASA
>Mature_181_residues
SKALRSYKGMAPKLGANVYIDEACVLVGDIELGDDASVWPMVAARGDVNHIRIGKRSSIQDGTILHVTRKTPAKPEGHPL
IIGDDVTVGHKAMLHGCTVGNRVLIGMGAIVLDGAHVCDDVILGAGSLVPPGKVLESGYLYVGSPAKQARPLTEAELKFL
PQSAQNYVLLKEEYLQEQASA

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=178, Percent_Identity=58.9887640449438, Blast_Score=228, Evalue=2e-61,
Organism=Escherichia coli, GI1787667, Length=162, Percent_Identity=35.1851851851852, Blast_Score=103, Evalue=5e-24,
Organism=Escherichia coli, GI87081681, Length=162, Percent_Identity=29.6296296296296, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19324; Mature: 19192

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKALRSYKGMAPKLGANVYIDEACVLVGDIELGDDASVWPMVAARGDVNHIRIGKRSSI
CCHHHHHHCCCCCCCCCEEEECCEEEEEEEEEECCCCCCCEEEECCCCCCEEEECCCCCC
QDGTILHVTRKTPAKPEGHPLIIGDDVTVGHKAMLHGCTVGNRVLIGMGAIVLDGAHVCD
CCCEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHEECCCCCEEEEECCEEEECCHHHHH
DVILGAGSLVPPGKVLESGYLYVGSPAKQARPLTEAELKFLPQSAQNYVLLKEEYLQEQA
HHHCCCCCCCCCHHHHHCCEEEECCCHHHCCCCCHHHHHHCCCCCCCEEEEHHHHHHHHH
SA
CC
>Mature Secondary Structure 
SKALRSYKGMAPKLGANVYIDEACVLVGDIELGDDASVWPMVAARGDVNHIRIGKRSSI
CHHHHHHCCCCCCCCCEEEECCEEEEEEEEEECCCCCCCEEEECCCCCCEEEECCCCCC
QDGTILHVTRKTPAKPEGHPLIIGDDVTVGHKAMLHGCTVGNRVLIGMGAIVLDGAHVCD
CCCEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHEECCCCCEEEEECCEEEECCHHHHH
DVILGAGSLVPPGKVLESGYLYVGSPAKQARPLTEAELKFLPQSAQNYVLLKEEYLQEQA
HHHCCCCCCCCCHHHHHCCEEEECCCHHHCCCCCHHHHHHCCCCCCCEEEEHHHHHHHHH
SA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]