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The map label for this gene is smf [H]

Identifier: 119773187

GI number: 119773187

Start: 48882

End: 49898

Strand: Direct

Name: smf [H]

Synonym: Sama_0045

Alternate gene names: 119773187

Gene position: 48882-49898 (Clockwise)

Preceding gene: 119773186

Following gene: 119773188

Centisome position: 1.14

GC content: 54.18

Gene sequence:

>1017_bases
ATGGATGTGGACGAGTTAAGACAAAGGCTGGAAACGGAGAAAGACTCCCTGCCTTTGTCCCCCTCTCTGCGGTCCGGCTT
GGTTGTGGATTACCGCTTGGTGGATGCGGCGTTGCAATGGCAAGACGCATCCACTGCCCACCACCTTATCTGTTTTGATG
ACCCTCGTTATCCTCCATTACTCAAAACCATCACAGACCCACCCATCTTTCTTTTTGTGAGAGGTCAGGCTGAGGCTTTG
TTGCGACCTTCTGTTGCCATGGTGGGCAGCCGGGCTGCGAGTTACAGCGGGCTGCAAACGGCCAGAATGCTGGCGTCCGG
ACTCGCAGGTTATGGCTTTGCCGTTGTCAGCGGCTTGGCGGCGGGGATTGATGGCGCCAGTCATCAGGGAGCATTGGCCG
CCAGCGGCGTGACCCATGCGGTGCTTGGCACGGGGATTGATGAAATCTACCCCAAAAAGCATGCCCATCTGGCCAATGAC
ATTTTACTGAGAGGTTGCATCGTCAGTGAGTTCTGGCCGGGCACGCCCGTGTTTGCCGGTAACTTTCCGAAGCGAAACCG
TATTGTCACGGGAATGGCCCTGGGTACTCTGGTGGTTGAGGCAGCCAGAAAGAGCGGCTCGTTAATTTCCGCCAGACTGG
CGATGGAGCAAGGCAGGGAGGTTTTCGCCGTGCCCGGCTGCGTATTGGATGAACGACATCAGGGATGTCATGATTTGTTG
CGACAGGGGGTAAAACTTGTTTGCGACGCTGCCGATATAGTGGAGGAACTAGGCAGTATGTTGAGTTGTCAGCTTGATAT
GTTGCCCCAAAGCCCCCATATGCAAGCTGAAAGTGGTCAGGAGTTGCCTTACCCGGAGCTCTTGGCTAGTGTAGAGTATG
AGACCACACCCATAGACAGGTTGGTGGAACATAGTGGTAAACCGATAGATCTTGTGCTGGAACAAATACTTGAGTTGGAG
TTACAAGGTTGGGTTGCTGCAGTACCCGGTGGTTACGTCAGAGTGAAGAGGAATTAG

Upstream 100 bases:

>100_bases
GATAACGGGGGAATAAATCACAGCCAGTCTGGTCGACTGGTTAATTGTCGGTGCTGTTTCCGGGTTGGGACCGACCCGGA
TCCGCCAATTGCTCCAACAC

Downstream 100 bases:

>100_bases
CCATGTTTGACATCCTCATGTACCTATTCGAGAACTATGTTCAGAATGACCTGGAAGTTGACATGCTGGTGGACGAAGAC
CAGCTGAAAAAAGAACTGGC

Product: DNA processing protein DprA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MDVDELRQRLETEKDSLPLSPSLRSGLVVDYRLVDAALQWQDASTAHHLICFDDPRYPPLLKTITDPPIFLFVRGQAEAL
LRPSVAMVGSRAASYSGLQTARMLASGLAGYGFAVVSGLAAGIDGASHQGALAASGVTHAVLGTGIDEIYPKKHAHLAND
ILLRGCIVSEFWPGTPVFAGNFPKRNRIVTGMALGTLVVEAARKSGSLISARLAMEQGREVFAVPGCVLDERHQGCHDLL
RQGVKLVCDAADIVEELGSMLSCQLDMLPQSPHMQAESGQELPYPELLASVEYETTPIDRLVEHSGKPIDLVLEQILELE
LQGWVAAVPGGYVRVKRN

Sequences:

>Translated_338_residues
MDVDELRQRLETEKDSLPLSPSLRSGLVVDYRLVDAALQWQDASTAHHLICFDDPRYPPLLKTITDPPIFLFVRGQAEAL
LRPSVAMVGSRAASYSGLQTARMLASGLAGYGFAVVSGLAAGIDGASHQGALAASGVTHAVLGTGIDEIYPKKHAHLAND
ILLRGCIVSEFWPGTPVFAGNFPKRNRIVTGMALGTLVVEAARKSGSLISARLAMEQGREVFAVPGCVLDERHQGCHDLL
RQGVKLVCDAADIVEELGSMLSCQLDMLPQSPHMQAESGQELPYPELLASVEYETTPIDRLVEHSGKPIDLVLEQILELE
LQGWVAAVPGGYVRVKRN
>Mature_338_residues
MDVDELRQRLETEKDSLPLSPSLRSGLVVDYRLVDAALQWQDASTAHHLICFDDPRYPPLLKTITDPPIFLFVRGQAEAL
LRPSVAMVGSRAASYSGLQTARMLASGLAGYGFAVVSGLAAGIDGASHQGALAASGVTHAVLGTGIDEIYPKKHAHLAND
ILLRGCIVSEFWPGTPVFAGNFPKRNRIVTGMALGTLVVEAARKSGSLISARLAMEQGREVFAVPGCVLDERHQGCHDLL
RQGVKLVCDAADIVEELGSMLSCQLDMLPQSPHMQAESGQELPYPELLASVEYETTPIDRLVEHSGKPIDLVLEQILELE
LQGWVAAVPGGYVRVKRN

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=309, Percent_Identity=46.9255663430421, Blast_Score=259, Evalue=2e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 36449; Mature: 36449

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVDELRQRLETEKDSLPLSPSLRSGLVVDYRLVDAALQWQDASTAHHLICFDDPRYPPL
CCHHHHHHHHHHHHCCCCCCCCHHCCCEEEHHHHHHHHHCCCCCCCEEEEEECCCCCCHH
LKTITDPPIFLFVRGQAEALLRPSVAMVGSRAASYSGLQTARMLASGLAGYGFAVVSGLA
HHHCCCCCEEEEECCCHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
AGIDGASHQGALAASGVTHAVLGTGIDEIYPKKHAHLANDILLRGCIVSEFWPGTPVFAG
HCCCCCCCCCCEECCCHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEC
NFPKRNRIVTGMALGTLVVEAARKSGSLISARLAMEQGREVFAVPGCVLDERHQGCHDLL
CCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCHHHHHHCCHHHHH
RQGVKLVCDAADIVEELGSMLSCQLDMLPQSPHMQAESGQELPYPELLASVEYETTPIDR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHH
LVEHSGKPIDLVLEQILELELQGWVAAVPGGYVRVKRN
HHHCCCCCHHHHHHHHHHHHHCCEEEECCCCEEEEECC
>Mature Secondary Structure
MDVDELRQRLETEKDSLPLSPSLRSGLVVDYRLVDAALQWQDASTAHHLICFDDPRYPPL
CCHHHHHHHHHHHHCCCCCCCCHHCCCEEEHHHHHHHHHCCCCCCCEEEEEECCCCCCHH
LKTITDPPIFLFVRGQAEALLRPSVAMVGSRAASYSGLQTARMLASGLAGYGFAVVSGLA
HHHCCCCCEEEEECCCHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
AGIDGASHQGALAASGVTHAVLGTGIDEIYPKKHAHLANDILLRGCIVSEFWPGTPVFAG
HCCCCCCCCCCEECCCHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEC
NFPKRNRIVTGMALGTLVVEAARKSGSLISARLAMEQGREVFAVPGCVLDERHQGCHDLL
CCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCHHHHHHCCHHHHH
RQGVKLVCDAADIVEELGSMLSCQLDMLPQSPHMQAESGQELPYPELLASVEYETTPIDR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHH
LVEHSGKPIDLVLEQILELELQGWVAAVPGGYVRVKRN
HHHCCCCCHHHHHHHHHHHHHCCEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8432722; 8112305; 9278503 [H]