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The map label for this gene is 119773186

Identifier: 119773186

GI number: 119773186

Start: 47757

End: 48797

Strand: Direct

Name: 119773186

Synonym: Sama_0044

Alternate gene names: NA

Gene position: 47757-48797 (Clockwise)

Preceding gene: 119773180

Following gene: 119773187

Centisome position: 1.11

GC content: 51.87

Gene sequence:

>1041_bases
ATGGCCGATACCCTGACGCTTAAGCCAGGCCATCCGGACACCTACGTCGTCGTGAAAGGGGATACCCTCTGGGATATTTC
TGCGAAGTTTTTAAACGACCCCTGGCGTTGGCCAAAGCTTTGGAATGCCAACCCACAAATTGCCAATCCCCATTTGATTT
ACCCCGGGGATCGTCTGACATTGGTCTTTATCGATGGTCAGCCGCGTTTGGTGGTCAAGCCTCAGGTTCGTAAGAGCCCT
GAAGGGCGGGTCATGCCAAAAGGTGGAGCCATTCCAGCGGTGAATCTGGAACTTATCCAGCCTTATTTGAGCCAAAATCG
AGTGGTTGACGATGACTGGTTTGCACAGCAGCCCATGATTCTTGGTGGCGAGAGTCCATCACGTTTCCATATCGAGAGTG
ATGTGATTTATGTGCAGGCAGAGCTGCCCGTTGGTATGAAGGTGGCTGCTTATGATGTTGGCCGGATCTTTACCGATAAA
ACCACCGAAGAGACACTGGGCCGTGAAGTTATCCTGACGGCGAGTGGCCGTGTGGTTGAGTCTGGCCCCATTTCCAAAAT
CCAAATCAGCACCAACCTGCGTGAAACCCGTCCAGGTAATCGCGTGCTGCCCATCGAAGATGAAGCCTTGATGTCAGCAT
ACTTTATGCCCAAGCCTGCCGATGTCACCGATGCCTATGTGATTGGTACCGAAAAAGACATTCGCGAAGTGGGTAAACTG
GATGTGGTGTACATCAGCAAGGGCGAGAGCGACGGGGTTGAGCCCGGCGATGTGTTTGCCATTCATCGCGACGGTGAAAC
CGTGGTCATTAATAAAGAGGGTACACCTGTCCCAAGTATAGATCGCAGTGCCTACGGTGATCTGATGGCCACCTTTGGCA
GCGACAGCGCCATCAAGTTGCCCGATGTGTATCATGGCAATCTCATGGTGTTCAAAGTATTCGATAAAGTGAGCATGGGT
CTTATCATGATCAATAACCGTCCGGTGCGTGCCGATGACAAGCTATCAGTGCCTGCAGAAACCGGGATAACGGGGGAATA
A

Upstream 100 bases:

>100_bases
CAATAACAGTAAAAGCTCGCTTAACGAGCCAAACAACATGGATGCTCCCATGAAAAGGTTAATTCTAGTCGCGTTAATCT
CTCTAACCAGTTCGTTTGCC

Downstream 100 bases:

>100_bases
ATCACAGCCAGTCTGGTCGACTGGTTAATTGTCGGTGCTGTTTCCGGGTTGGGACCGACCCGGATCCGCCAATTGCTCCA
ACACATGGATGTGGACGAGT

Product: LysM domain-containing protein

Products: NA

Alternate protein names: LysM Domain Protein; Cell Wall Degradation; LysM Motif-Containing Protein; Protein Containing LysM Domain; Signal Peptide Protein; LysM Family Cell Wall Degradation Protein; Lysin Domain-Containing Protein; Lysm Domain Protein; Signal Peptide Protein LysM Domain Protein; Secreted Protein

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MADTLTLKPGHPDTYVVVKGDTLWDISAKFLNDPWRWPKLWNANPQIANPHLIYPGDRLTLVFIDGQPRLVVKPQVRKSP
EGRVMPKGGAIPAVNLELIQPYLSQNRVVDDDWFAQQPMILGGESPSRFHIESDVIYVQAELPVGMKVAAYDVGRIFTDK
TTEETLGREVILTASGRVVESGPISKIQISTNLRETRPGNRVLPIEDEALMSAYFMPKPADVTDAYVIGTEKDIREVGKL
DVVYISKGESDGVEPGDVFAIHRDGETVVINKEGTPVPSIDRSAYGDLMATFGSDSAIKLPDVYHGNLMVFKVFDKVSMG
LIMINNRPVRADDKLSVPAETGITGE

Sequences:

>Translated_346_residues
MADTLTLKPGHPDTYVVVKGDTLWDISAKFLNDPWRWPKLWNANPQIANPHLIYPGDRLTLVFIDGQPRLVVKPQVRKSP
EGRVMPKGGAIPAVNLELIQPYLSQNRVVDDDWFAQQPMILGGESPSRFHIESDVIYVQAELPVGMKVAAYDVGRIFTDK
TTEETLGREVILTASGRVVESGPISKIQISTNLRETRPGNRVLPIEDEALMSAYFMPKPADVTDAYVIGTEKDIREVGKL
DVVYISKGESDGVEPGDVFAIHRDGETVVINKEGTPVPSIDRSAYGDLMATFGSDSAIKLPDVYHGNLMVFKVFDKVSMG
LIMINNRPVRADDKLSVPAETGITGE
>Mature_345_residues
ADTLTLKPGHPDTYVVVKGDTLWDISAKFLNDPWRWPKLWNANPQIANPHLIYPGDRLTLVFIDGQPRLVVKPQVRKSPE
GRVMPKGGAIPAVNLELIQPYLSQNRVVDDDWFAQQPMILGGESPSRFHIESDVIYVQAELPVGMKVAAYDVGRIFTDKT
TEETLGREVILTASGRVVESGPISKIQISTNLRETRPGNRVLPIEDEALMSAYFMPKPADVTDAYVIGTEKDIREVGKLD
VVYISKGESDGVEPGDVFAIHRDGETVVINKEGTPVPSIDRSAYGDLMATFGSDSAIKLPDVYHGNLMVFKVFDKVSMGL
IMINNRPVRADDKLSVPAETGITGE

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38139; Mature: 38008

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTLTLKPGHPDTYVVVKGDTLWDISAKFLNDPWRWPKLWNANPQIANPHLIYPGDRLT
CCCEEEECCCCCCEEEEEECCEEEEEHHHHCCCCCCCCEECCCCCCCCCCEEECCCCEEE
LVFIDGQPRLVVKPQVRKSPEGRVMPKGGAIPAVNLELIQPYLSQNRVVDDDWFAQQPMI
EEEECCCCEEEECCHHCCCCCCCEEECCCCCCEEEHHHHHHHHHCCCEECCCHHCCCCEE
LGGESPSRFHIESDVIYVQAELPVGMKVAAYDVGRIFTDKTTEETLGREVILTASGRVVE
EECCCCCEEEEECCEEEEEEECCCCEEEEEEECCEEECCCCCHHHCCCEEEEEECCEEEE
SGPISKIQISTNLRETRPGNRVLPIEDEALMSAYFMPKPADVTDAYVIGTEKDIREVGKL
CCCCEEEEEECCCHHCCCCCEEEECCCHHHHHEECCCCCCCCCCEEEECCHHHHHHHCCE
DVVYISKGESDGVEPGDVFAIHRDGETVVINKEGTPVPSIDRSAYGDLMATFGSDSAIKL
EEEEEECCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCHHHCCCEEECCCCCEEEC
PDVYHGNLMVFKVFDKVSMGLIMINNRPVRADDKLSVPAETGITGE
CCEEECCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADTLTLKPGHPDTYVVVKGDTLWDISAKFLNDPWRWPKLWNANPQIANPHLIYPGDRLT
CCEEEECCCCCCEEEEEECCEEEEEHHHHCCCCCCCCEECCCCCCCCCCEEECCCCEEE
LVFIDGQPRLVVKPQVRKSPEGRVMPKGGAIPAVNLELIQPYLSQNRVVDDDWFAQQPMI
EEEECCCCEEEECCHHCCCCCCCEEECCCCCCEEEHHHHHHHHHCCCEECCCHHCCCCEE
LGGESPSRFHIESDVIYVQAELPVGMKVAAYDVGRIFTDKTTEETLGREVILTASGRVVE
EECCCCCEEEEECCEEEEEEECCCCEEEEEEECCEEECCCCCHHHCCCEEEEEECCEEEE
SGPISKIQISTNLRETRPGNRVLPIEDEALMSAYFMPKPADVTDAYVIGTEKDIREVGKL
CCCCEEEEEECCCHHCCCCCEEEECCCHHHHHEECCCCCCCCCCEEEECCHHHHHHHCCE
DVVYISKGESDGVEPGDVFAIHRDGETVVINKEGTPVPSIDRSAYGDLMATFGSDSAIKL
EEEEEECCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCHHHCCCEEECCCCCEEEC
PDVYHGNLMVFKVFDKVSMGLIMINNRPVRADDKLSVPAETGITGE
CCEEECCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA