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The map label for this gene is ybgL [C]

Identifier: 119773163

GI number: 119773163

Start: 19768

End: 20493

Strand: Reverse

Name: ybgL [C]

Synonym: Sama_0021

Alternate gene names: 119773163

Gene position: 20493-19768 (Counterclockwise)

Preceding gene: 119773164

Following gene: 119773162

Centisome position: 0.48

GC content: 59.09

Gene sequence:

>726_bases
ATGTCTAGTCTTCAGTTAAATGCCGATGTGGGCGAAGGCTACCCCTTCGATGCCGACATTATCGCGCTGGTAGATGCCGC
CAATATCGCCTGTGGTGGCCACGCGGGTGACTCAAACAGCATGCGCGCTACAGTGAAACTTGCGATTGCCAACGGCTGCC
TGATTGGCGCCCATCCGTCATTCCCCGATAAAGCCAACTTTGGCCGCCAGCCCATGCGTATGGAAGCCATTGCGCTGACC
ACCAGCCTTATCGACCAAATTCAAGCCCTGAAGCAAATTTGCGATGAAGAAGGCGCAACCATGTTTCACGTGAAACCCCA
CGGCGCCCTCTACAATCAGGCAGCGTTCGATAAAGAACTGGCCTCATGCCTTATTGAGGCGATACAGGCCGTCGACGCCA
AGCTGGTGCTCATGGGCTTAGCAGCAAGCCCACTGCTGCAATGGGCCCGTGAGGCAGGCCTTCGGGTGCAGGCAGAGGCC
TTTGCCGACCGCCGCTACGAAGCGGACGCCACCCTGGTGTCGAGGCAACAACCGGGGGCAGTGATCCACAACCAAGCCGA
AGCGCTGGCACAGGTGCAGGCGTTAATGTCAGGCAGCCTCACCAGTATTGATGGCGCCCGCCTCAGGCTTAGGGCCGACA
CTCTGTGCCTGCACGGTGACAATCCCGAGGCGTTGCAGTTTGCCCGCCGCATACGGGCATTGCTGGAGACGAGCCATGCT
GACTGA

Upstream 100 bases:

>100_bases
CAATTTGTCTTGGTCGACCGCGCCGAAGCACGGGCCGCTTGCGAGCGTTGGAATCAATATTTTTATCGCCTCGGCCGAGC
TCTTGGCAACGGAGAAGCCC

Downstream 100 bases:

>100_bases
CCTGCTCGCCCTCAATTACTGGCCGCTGATTGGTATTCCCGTGGTGGTGCTGGGGTTCGCACTGAAATTCAATCCCTTGC
TGGTTGTTACCCTCGCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSSLQLNADVGEGYPFDADIIALVDAANIACGGHAGDSNSMRATVKLAIANGCLIGAHPSFPDKANFGRQPMRMEAIALT
TSLIDQIQALKQICDEEGATMFHVKPHGALYNQAAFDKELASCLIEAIQAVDAKLVLMGLAASPLLQWAREAGLRVQAEA
FADRRYEADATLVSRQQPGAVIHNQAEALAQVQALMSGSLTSIDGARLRLRADTLCLHGDNPEALQFARRIRALLETSHA
D

Sequences:

>Translated_241_residues
MSSLQLNADVGEGYPFDADIIALVDAANIACGGHAGDSNSMRATVKLAIANGCLIGAHPSFPDKANFGRQPMRMEAIALT
TSLIDQIQALKQICDEEGATMFHVKPHGALYNQAAFDKELASCLIEAIQAVDAKLVLMGLAASPLLQWAREAGLRVQAEA
FADRRYEADATLVSRQQPGAVIHNQAEALAQVQALMSGSLTSIDGARLRLRADTLCLHGDNPEALQFARRIRALLETSHA
D
>Mature_240_residues
SSLQLNADVGEGYPFDADIIALVDAANIACGGHAGDSNSMRATVKLAIANGCLIGAHPSFPDKANFGRQPMRMEAIALTT
SLIDQIQALKQICDEEGATMFHVKPHGALYNQAAFDKELASCLIEAIQAVDAKLVLMGLAASPLLQWAREAGLRVQAEAF
ADRRYEADATLVSRQQPGAVIHNQAEALAQVQALMSGSLTSIDGARLRLRADTLCLHGDNPEALQFARRIRALLETSHAD

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=232, Percent_Identity=48.7068965517241, Blast_Score=218, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 25731; Mature: 25599

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLQLNADVGEGYPFDADIIALVDAANIACGGHAGDSNSMRATVKLAIANGCLIGAHPS
CCCEEECCCCCCCCCCCCHHEEEEECCCEEECCCCCCCCCEEEEEEEEEECCEEECCCCC
FPDKANFGRQPMRMEAIALTTSLIDQIQALKQICDEEGATMFHVKPHGALYNQAAFDKEL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH
ASCLIEAIQAVDAKLVLMGLAASPLLQWAREAGLRVQAEAFADRRYEADATLVSRQQPGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCCCCCHHHHCCCCCCC
VIHNQAEALAQVQALMSGSLTSIDGARLRLRADTLCLHGDNPEALQFARRIRALLETSHA
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCC
D
C
>Mature Secondary Structure 
SSLQLNADVGEGYPFDADIIALVDAANIACGGHAGDSNSMRATVKLAIANGCLIGAHPS
CCEEECCCCCCCCCCCCHHEEEEECCCEEECCCCCCCCCEEEEEEEEEECCEEECCCCC
FPDKANFGRQPMRMEAIALTTSLIDQIQALKQICDEEGATMFHVKPHGALYNQAAFDKEL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH
ASCLIEAIQAVDAKLVLMGLAASPLLQWAREAGLRVQAEAFADRRYEADATLVSRQQPGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCCCCCHHHHCCCCCCC
VIHNQAEALAQVQALMSGSLTSIDGARLRLRADTLCLHGDNPEALQFARRIRALLETSHA
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]