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The map label for this gene is oxaA [H]

Identifier: 119718914

GI number: 119718914

Start: 4983514

End: 4984605

Strand: Reverse

Name: oxaA [H]

Synonym: Noca_4697

Alternate gene names: 119718914

Gene position: 4984605-4983514 (Counterclockwise)

Preceding gene: 119718915

Following gene: 119718913

Centisome position: 99.97

GC content: 68.32

Gene sequence:

>1092_bases
GTGGGATTCCTCGGCGACATCGGCGCTTTCATCATGACGCCGCTCTACTACGCGATCTCGGCGGTGCTGGTCGCCTGGCA
CTCGGCGCTCGACGCGATCGGGCTGGACGGCGACAGCGGCCTGGTGTGGGTGCTGTCGATCATCGGCCTCACGCTCACGG
TTCGCGCGCTGCTGATCCCGCTGTTCGTCAAGCAGATCAAGTCCAGCCGCAACATGCAGCTGATCCAGCCCAAGGTCAAG
GAGCTGCAGAAGAAGTACGGGCACGACCGGGAGCGCCTGGCCCAGGAGACGATGAAGCTGTACAAGGACAGCGGGACCAA
CCCGTTCGCCTCGTGCCTGCCGCTCATCATCCAGATGCCGATCTTCCTGGCGCTGTTCCGGCTGCTCGACAAGCACGCCG
CCCGCGGGGACGGCAAGGCCTTCATCACCAAGGACCTGGCCGAGAGCTTCCAGAGCGCCGACCTGTTCAGCGTGCCGCTG
AAGGCCACGTTCCTGCGCAACGACGGCTCGACGGCCGTCATGGTCGTCGCCGCGATCCTGGTGCTGGCCATGACCGCCAC
GACGTTCACCACCCAGCGGCAGCTGATGAGCAAGAACATGCCGCCGGACGCGTTGTCGGGGCCCTACGCCCAGCAGCAGA
AGCTGCTGCTGTACGTCCTGCCGGTCGTCTTCGCCGTCGGTGGCATCGCGTTCCCGGTCGCGGTGCTCTTCTACTGGACC
ACGTCGAACCTGTGGACCATGGGCCAGCAGTTCTACGTGATCCGGAACAACCCGGCCCCCGGGACCGCGGCGGCCCAGGC
CAAGGCCGACCGCGACCGGGCCAAGGCCGCCCGGCACGGGCACGGCTTGGTGCAGACGGCCGACCCGGCGGTCGAGGCCG
AGACCGAGAACCGGCCGCAGCCGCGCCAGCAGCCGAAGAAGCAGTCCCGCGAGCAGCGCCGGAAGGCGACCGGCGCGACG
CCGGCCAACCCTGCGCGACCGAAGGGGCAGCAGCAGGCACAGCCCAAGCCGCAGTCCAAGCCGCAGTCCAAGGGACAGCA
GAAGTCCCGACAGCCCAAGCCCAAGCCCAGCCCCGAGGGGGAGCAGCAGTGA

Upstream 100 bases:

>100_bases
GTGCCACCCGTGGGCCGCCGGCGGCTACGACCCGGTCCCTCCCGCATCTTCCCGCCGCCGCGCGGGCTCATCTCCCTCCA
CCCAGCAAGGAGCCTGATCC

Downstream 100 bases:

>100_bases
GTGAGGACGCAGTGAGCGACGAGACCACGCAGGCCGGCGACATCGCCGTGGACGCGGCGGGCGGTCCGGAGCCGGCCGAC
GCGGACGATTCCGGCACGGG

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MGFLGDIGAFIMTPLYYAISAVLVAWHSALDAIGLDGDSGLVWVLSIIGLTLTVRALLIPLFVKQIKSSRNMQLIQPKVK
ELQKKYGHDRERLAQETMKLYKDSGTNPFASCLPLIIQMPIFLALFRLLDKHAARGDGKAFITKDLAESFQSADLFSVPL
KATFLRNDGSTAVMVVAAILVLAMTATTFTTQRQLMSKNMPPDALSGPYAQQQKLLLYVLPVVFAVGGIAFPVAVLFYWT
TSNLWTMGQQFYVIRNNPAPGTAAAQAKADRDRAKAARHGHGLVQTADPAVEAETENRPQPRQQPKKQSREQRRKATGAT
PANPARPKGQQQAQPKPQSKPQSKGQQKSRQPKPKPSPEGEQQ

Sequences:

>Translated_363_residues
MGFLGDIGAFIMTPLYYAISAVLVAWHSALDAIGLDGDSGLVWVLSIIGLTLTVRALLIPLFVKQIKSSRNMQLIQPKVK
ELQKKYGHDRERLAQETMKLYKDSGTNPFASCLPLIIQMPIFLALFRLLDKHAARGDGKAFITKDLAESFQSADLFSVPL
KATFLRNDGSTAVMVVAAILVLAMTATTFTTQRQLMSKNMPPDALSGPYAQQQKLLLYVLPVVFAVGGIAFPVAVLFYWT
TSNLWTMGQQFYVIRNNPAPGTAAAQAKADRDRAKAARHGHGLVQTADPAVEAETENRPQPRQQPKKQSREQRRKATGAT
PANPARPKGQQQAQPKPQSKPQSKGQQKSRQPKPKPSPEGEQQ
>Mature_362_residues
GFLGDIGAFIMTPLYYAISAVLVAWHSALDAIGLDGDSGLVWVLSIIGLTLTVRALLIPLFVKQIKSSRNMQLIQPKVKE
LQKKYGHDRERLAQETMKLYKDSGTNPFASCLPLIIQMPIFLALFRLLDKHAARGDGKAFITKDLAESFQSADLFSVPLK
ATFLRNDGSTAVMVVAAILVLAMTATTFTTQRQLMSKNMPPDALSGPYAQQQKLLLYVLPVVFAVGGIAFPVAVLFYWTT
SNLWTMGQQFYVIRNNPAPGTAAAQAKADRDRAKAARHGHGLVQTADPAVEAETENRPQPRQQPKKQSREQRRKATGATP
ANPARPKGQQQAQPKPQSKPQSKGQQKSRQPKPKPSPEGEQQ

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=226, Percent_Identity=31.4159292035398, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 39854; Mature: 39723

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure 
GFLGDIGAFIMTPLYYAISAVLVAWHSALDAIGLDGDSGLVWVLSIIGLTLTVRALLIP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LFVKQIKSSRNMQLIQPKVKELQKKYGHDRERLAQETMKLYKDSGTNPFASCLPLIIQMP
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IFLALFRLLDKHAARGDGKAFITKDLAESFQSADLFSVPLKATFLRNDGSTAVMVVAAIL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECCHHEEEEECCCCHHHHHHHHHH
VLAMTATTFTTQRQLMSKNMPPDALSGPYAQQQKLLLYVLPVVFAVGGIAFPVAVLFYWT
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSNLWTMGQQFYVIRNNPAPGTAAAQAKADRDRAKAARHGHGLVQTADPAVEAETENRPQ
CCCHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PRQQPKKQSREQRRKATGATPANPARPKGQQQAQPKPQSKPQSKGQQKSRQPKPKPSPEG
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
EQQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1577691; 9795152; 12000953 [H]