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The map label for this gene is pbpG [H]

Identifier: 119718893

GI number: 119718893

Start: 4955357

End: 4957693

Strand: Reverse

Name: pbpG [H]

Synonym: Noca_4676

Alternate gene names: 119718893

Gene position: 4957693-4955357 (Counterclockwise)

Preceding gene: 119718897

Following gene: 119718892

Centisome position: 99.43

GC content: 68.93

Gene sequence:

>2337_bases
GTGAGTGGTAAGCGCAGGGCCGCAGGCCCCGCCAGCAAGACGACCGCCTCCAAGCCGGGCAGCAAGCCCAAGCGTCCCCG
CACCCGCAAGCAGCAGGCGCTGCGGGTCGCGAAGTGGGGCTCGATCGTGGGCCTGGCGCTCCTGCTGATCGCCGTCGGCG
GGTTCGTCTTCCTCTACAAGACGATCGACATCCCGGACCCGAACGCCGACTTCGAGGCCGAGACGTCGTTCGTCTACTAC
GCCGACGGCAAGGCCCAGGTCGGCAACTTCGCCACCCAGAACCGTGAGTCGATCACGCTCAAGCAGATGCCCCAGACGCT
CCAGGACGCGGTGGTCGCCGCGGAGAACCGGTCCTTCCGGACCGACAACGGCATCGACCCGAAGGGGATCCTGCGCGCCG
CCTTCAGCAACGCGCAGGGCAACTCGACCCAGGGTGCGTCGACGATCACCCAGCAGTACGTCAAGATCCTCTACCTCAAT
CAGGAGCGTTCCTACACCCGCAAGGTGAAGGAGGCGATCCTGTCGCTGAAGATCCAGCGCACGAAGAGCAAGTCGGAGAT
CCTCGAGGGCTACCTCAACACGATCTACTTCGGGCGCGGGGCGTACGGCGTGCAGGCGGCCTCCCGGGCGTTCTTCGACA
AGGACGCCAAGGACCTCTCCCTGAAGGAGTCGGCCGTCCTCGCGAGCGTGCTGAACAACCCCTCGCGCTTCGACCCGGCC
AACGGCAAGGACAACAAGCGGGCGCTCAAGGAGCGCTACGCCTACGTCCTCGACGGGATGGCCGACGCCGGCAACATCAC
CGCCGAGCAGGCCGACAAGGCCGAGAAGTCGCTGCCGAAGTTCCCGGAGATCAAGGCGGAGAGCAAGTACGGCGAGCAGC
GCGGCCACATGCTCAAGCTGGTGCGCGACGAGATGCACGAGCTCGGCTACACCGACGAGCAGATCGACAGCCAGGGCTAC
CGGATCACCACTACGTTCACGCAGAAGGCCATGGACGCCGCGAAGGCCGGCGTGCTGGAGCAGCGGCCCGAGGGCTTCAA
GGACAAGGAGCTGCACATCGGGGTCGCGAGCGTCGAGCCCGGCACCGGTGCGCTGCGCGGGTTCTACGGCGGTCAGGACT
ACCTGGACTCCCAGATCAACTGGGCGGCCACCGGCGGGATGGTCGGCTCGACGATCAAGCCGATCACGGTCGCCACGGCC
CTGGAGAACGGCTACTCGCTCAAGGACACCTTCGAGGGCAACTCGCCGTACGTCTTCCCCGACGGCCTCGACGTGGTCAA
CGAGGGTCCCGGCGACGGCAACGACTACGGCGCCAAGGTCAGCCTGACCCTCGCGACCGAGCAGTCGATCAACACCGCCT
TCGTCGACATGTCGAACTCGATCCCCGACGGGCCGGCGAAGATCGTCGAGACCGCGAACAAGGTCGGGATCCCGCCGGCG
GACCCGACGAAGAAGTACCCCGGGATCCCCGACAAGAGCATCGACCTCGAACCGGACGCGCTGGTCACCCTCGGCAAGGC
GCGGATCAGCCCGATCAACATGGCCAACGCCTACGCGACGATCGCGAACGGCGGCGAGCGCGCCGACGTGCACGTGATCG
ACAAGATCGTGAGCCGCAAGGGCGAGGTGCTCTACTCCTTCAAGCAGCACACCACCCCGGCGTTCGACGACTTCGCCGAC
GGCGTCGACGTGACGACCGCGTCCGGGCAGAAGGCGACCAGCGAGGACATCGCCGCCGACACCTCCTACGCCCTGCAGCA
GGTGGTCGCGAACGGCACCGGCCGCAACGCGCTGGCCCTGGGTCGTCCGGCGGCCGGCAAGACCGGCACGGCCACCAACG
ACGACGGCGACGTCTCCTCGTCGTGGTTCGTCGGGTACACCCCGCAGCTCGCGACGGCCGTCATGTACGTCCGCGGCGAC
GGCGACAACGCGCTCAACGACTGGCTGCCGTCGTACTTCGGTGCGGAGTATCCGACCCGCACCTGGACCGCCGTGATGAG
CCGCGCCCTCGAGGGCACCGAGGTGGAGAGCTTCCCCGAGCCGGCGAACGTCGACGGCGAGGCGCCGGCCGACGGGCACG
AGCCGTACACGCCGCCGCCGAAGCCGACCAAGACCCCGAAGCCGAGCGAGACGCCGAGCGAGACGCCGTCGGAGTCCTCG
ACCCCGACCCCGACCGAGACGCCCACCCCGACCGAGTCGCCGAGCGACAGCTGCGGCCTGCTCGGGTGCGGCTCGCCGTC
GGGCTCGCCGTCGTCCTCGGACAGCCCGAGCACGCCGCCGAGCGGGGGCGCCTCGCCGAGCGGCGGGGGCCGCGGCCGTC
GACCGCGGCGCGGCTGA

Upstream 100 bases:

>100_bases
CCGACGTCTTGGGCGGGCCCACCCGGCCGCCGTACCCTGACCAGGATCTTCACGCCGACCAGCACCCCGACCAGCACCCC
GACCAGCGGAGCCAACGACT

Downstream 100 bases:

>100_bases
GGCGAGGTCGATGCGGCAGGCCGGGCCCGGGCAGGGCGTCGGGTCGGACGCCGACCGGGCCCATCCCACGACCGACGACC
CGGTGGCCGCCGCGCTGAGC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: PBP-2D; PBP2d [H]

Number of amino acids: Translated: 778; Mature: 777

Protein sequence:

>778_residues
MSGKRRAAGPASKTTASKPGSKPKRPRTRKQQALRVAKWGSIVGLALLLIAVGGFVFLYKTIDIPDPNADFEAETSFVYY
ADGKAQVGNFATQNRESITLKQMPQTLQDAVVAAENRSFRTDNGIDPKGILRAAFSNAQGNSTQGASTITQQYVKILYLN
QERSYTRKVKEAILSLKIQRTKSKSEILEGYLNTIYFGRGAYGVQAASRAFFDKDAKDLSLKESAVLASVLNNPSRFDPA
NGKDNKRALKERYAYVLDGMADAGNITAEQADKAEKSLPKFPEIKAESKYGEQRGHMLKLVRDEMHELGYTDEQIDSQGY
RITTTFTQKAMDAAKAGVLEQRPEGFKDKELHIGVASVEPGTGALRGFYGGQDYLDSQINWAATGGMVGSTIKPITVATA
LENGYSLKDTFEGNSPYVFPDGLDVVNEGPGDGNDYGAKVSLTLATEQSINTAFVDMSNSIPDGPAKIVETANKVGIPPA
DPTKKYPGIPDKSIDLEPDALVTLGKARISPINMANAYATIANGGERADVHVIDKIVSRKGEVLYSFKQHTTPAFDDFAD
GVDVTTASGQKATSEDIAADTSYALQQVVANGTGRNALALGRPAAGKTGTATNDDGDVSSSWFVGYTPQLATAVMYVRGD
GDNALNDWLPSYFGAEYPTRTWTAVMSRALEGTEVESFPEPANVDGEAPADGHEPYTPPPKPTKTPKPSETPSETPSESS
TPTPTETPTPTESPSDSCGLLGCGSPSGSPSSSDSPSTPPSGGASPSGGGRGRRPRRG

Sequences:

>Translated_778_residues
MSGKRRAAGPASKTTASKPGSKPKRPRTRKQQALRVAKWGSIVGLALLLIAVGGFVFLYKTIDIPDPNADFEAETSFVYY
ADGKAQVGNFATQNRESITLKQMPQTLQDAVVAAENRSFRTDNGIDPKGILRAAFSNAQGNSTQGASTITQQYVKILYLN
QERSYTRKVKEAILSLKIQRTKSKSEILEGYLNTIYFGRGAYGVQAASRAFFDKDAKDLSLKESAVLASVLNNPSRFDPA
NGKDNKRALKERYAYVLDGMADAGNITAEQADKAEKSLPKFPEIKAESKYGEQRGHMLKLVRDEMHELGYTDEQIDSQGY
RITTTFTQKAMDAAKAGVLEQRPEGFKDKELHIGVASVEPGTGALRGFYGGQDYLDSQINWAATGGMVGSTIKPITVATA
LENGYSLKDTFEGNSPYVFPDGLDVVNEGPGDGNDYGAKVSLTLATEQSINTAFVDMSNSIPDGPAKIVETANKVGIPPA
DPTKKYPGIPDKSIDLEPDALVTLGKARISPINMANAYATIANGGERADVHVIDKIVSRKGEVLYSFKQHTTPAFDDFAD
GVDVTTASGQKATSEDIAADTSYALQQVVANGTGRNALALGRPAAGKTGTATNDDGDVSSSWFVGYTPQLATAVMYVRGD
GDNALNDWLPSYFGAEYPTRTWTAVMSRALEGTEVESFPEPANVDGEAPADGHEPYTPPPKPTKTPKPSETPSETPSESS
TPTPTETPTPTESPSDSCGLLGCGSPSGSPSSSDSPSTPPSGGASPSGGGRGRRPRRG
>Mature_777_residues
SGKRRAAGPASKTTASKPGSKPKRPRTRKQQALRVAKWGSIVGLALLLIAVGGFVFLYKTIDIPDPNADFEAETSFVYYA
DGKAQVGNFATQNRESITLKQMPQTLQDAVVAAENRSFRTDNGIDPKGILRAAFSNAQGNSTQGASTITQQYVKILYLNQ
ERSYTRKVKEAILSLKIQRTKSKSEILEGYLNTIYFGRGAYGVQAASRAFFDKDAKDLSLKESAVLASVLNNPSRFDPAN
GKDNKRALKERYAYVLDGMADAGNITAEQADKAEKSLPKFPEIKAESKYGEQRGHMLKLVRDEMHELGYTDEQIDSQGYR
ITTTFTQKAMDAAKAGVLEQRPEGFKDKELHIGVASVEPGTGALRGFYGGQDYLDSQINWAATGGMVGSTIKPITVATAL
ENGYSLKDTFEGNSPYVFPDGLDVVNEGPGDGNDYGAKVSLTLATEQSINTAFVDMSNSIPDGPAKIVETANKVGIPPAD
PTKKYPGIPDKSIDLEPDALVTLGKARISPINMANAYATIANGGERADVHVIDKIVSRKGEVLYSFKQHTTPAFDDFADG
VDVTTASGQKATSEDIAADTSYALQQVVANGTGRNALALGRPAAGKTGTATNDDGDVSSSWFVGYTPQLATAVMYVRGDG
DNALNDWLPSYFGAEYPTRTWTAVMSRALEGTEVESFPEPANVDGEAPADGHEPYTPPPKPTKTPKPSETPSETPSESST
PTPTETPTPTESPSDSCGLLGCGSPSGSPSSSDSPSTPPSGGASPSGGGRGRRPRRG

Specific function: Involved in the polymerization and cross-linking of spore peptidoglycan. May be required for synthesis of the spore germ cell wall, the first layer of peptidoglycan synthesized on the surface of the inner forespore membrane [H]

COG id: COG0744

COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transpeptidase family [H]

Homologues:

Organism=Escherichia coli, GI87082258, Length=319, Percent_Identity=35.7366771159875, Blast_Score=170, Evalue=3e-43,
Organism=Escherichia coli, GI1786343, Length=549, Percent_Identity=30.2367941712204, Blast_Score=168, Evalue=1e-42,
Organism=Escherichia coli, GI1789601, Length=222, Percent_Identity=34.2342342342342, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1788867, Length=454, Percent_Identity=24.2290748898678, Blast_Score=92, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001264
- InterPro:   IPR011816
- InterPro:   IPR001460 [H]

Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]

EC number: 2.4.2.-; 3.4.-.- [C]

Molecular weight: Translated: 82875; Mature: 82744

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKRRAAGPASKTTASKPGSKPKRPRTRKQQALRVAKWGSIVGLALLLIAVGGFVFLYK
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
TIDIPDPNADFEAETSFVYYADGKAQVGNFATQNRESITLKQMPQTLQDAVVAAENRSFR
EECCCCCCCCCCCCCCEEEEECCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHCCCCCC
TDNGIDPKGILRAAFSNAQGNSTQGASTITQQYVKILYLNQERSYTRKVKEAILSLKIQR
CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHH
TKSKSEILEGYLNTIYFGRGAYGVQAASRAFFDKDAKDLSLKESAVLASVLNNPSRFDPA
HCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC
NGKDNKRALKERYAYVLDGMADAGNITAEQADKAEKSLPKFPEIKAESKYGEQRGHMLKL
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
VRDEMHELGYTDEQIDSQGYRITTTFTQKAMDAAKAGVLEQRPEGFKDKELHIGVASVEP
HHHHHHHCCCCHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCC
GTGALRGFYGGQDYLDSQINWAATGGMVGSTIKPITVATALENGYSLKDTFEGNSPYVFP
CCCHHHCCCCCHHHHCCCCCEEECCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCEECC
DGLDVVNEGPGDGNDYGAKVSLTLATEQSINTAFVDMSNSIPDGPAKIVETANKVGIPPA
CCCHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCC
DPTKKYPGIPDKSIDLEPDALVTLGKARISPINMANAYATIANGGERADVHVIDKIVSRK
CCCCCCCCCCCCCCCCCCHHHEEECCHHCCCCCHHHHEEEECCCCCCCHHHHHHHHHHCC
GEVLYSFKQHTTPAFDDFADGVDVTTASGQKATSEDIAADTSYALQQVVANGTGRNALAL
CCEEEEHHHCCCCCHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE
GRPAAGKTGTATNDDGDVSSSWFVGYTPQLATAVMYVRGDGDNALNDWLPSYFGAEYPTR
CCCCCCCCCCCCCCCCCCCCCEEEEECHHHEEEEEEEECCCCCCHHHHHHHHHCCCCCCH
TWTAVMSRALEGTEVESFPEPANVDGEAPADGHEPYTPPPKPTKTPKPSETPSETPSESS
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPTPTETPTPTESPSDSCGLLGCGSPSGSPSSSDSPSTPPSGGASPSGGGRGRRPRRG
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGKRRAAGPASKTTASKPGSKPKRPRTRKQQALRVAKWGSIVGLALLLIAVGGFVFLYK
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
TIDIPDPNADFEAETSFVYYADGKAQVGNFATQNRESITLKQMPQTLQDAVVAAENRSFR
EECCCCCCCCCCCCCCEEEEECCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHCCCCCC
TDNGIDPKGILRAAFSNAQGNSTQGASTITQQYVKILYLNQERSYTRKVKEAILSLKIQR
CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHH
TKSKSEILEGYLNTIYFGRGAYGVQAASRAFFDKDAKDLSLKESAVLASVLNNPSRFDPA
HCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC
NGKDNKRALKERYAYVLDGMADAGNITAEQADKAEKSLPKFPEIKAESKYGEQRGHMLKL
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
VRDEMHELGYTDEQIDSQGYRITTTFTQKAMDAAKAGVLEQRPEGFKDKELHIGVASVEP
HHHHHHHCCCCHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCC
GTGALRGFYGGQDYLDSQINWAATGGMVGSTIKPITVATALENGYSLKDTFEGNSPYVFP
CCCHHHCCCCCHHHHCCCCCEEECCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCEECC
DGLDVVNEGPGDGNDYGAKVSLTLATEQSINTAFVDMSNSIPDGPAKIVETANKVGIPPA
CCCHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCC
DPTKKYPGIPDKSIDLEPDALVTLGKARISPINMANAYATIANGGERADVHVIDKIVSRK
CCCCCCCCCCCCCCCCCCHHHEEECCHHCCCCCHHHHEEEECCCCCCCHHHHHHHHHHCC
GEVLYSFKQHTTPAFDDFADGVDVTTASGQKATSEDIAADTSYALQQVVANGTGRNALAL
CCEEEEHHHCCCCCHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE
GRPAAGKTGTATNDDGDVSSSWFVGYTPQLATAVMYVRGDGDNALNDWLPSYFGAEYPTR
CCCCCCCCCCCCCCCCCCCCCEEEEECHHHEEEEEEEECCCCCCHHHHHHHHHCCCCCCH
TWTAVMSRALEGTEVESFPEPANVDGEAPADGHEPYTPPPKPTKTPKPSETPSETPSESS
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPTPTETPTPTESPSDSCGLLGCGSPSGSPSSSDSPSTPPSGGASPSGGGRGRRPRRG
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]