| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718857
Identifier: 119718857
GI number: 119718857
Start: 4920965
End: 4921705
Strand: Reverse
Name: 119718857
Synonym: Noca_4640
Alternate gene names: NA
Gene position: 4921705-4920965 (Counterclockwise)
Preceding gene: 119718858
Following gene: 119718855
Centisome position: 98.71
GC content: 70.04
Gene sequence:
>741_bases ATGAACCCATCCATGCCGGCCCGCCGCCGCGGCGGCTTCGTCGCGCTGCTGGCGGGGCTCGCCCTGGCCACGGCGGTCGC GACCGGAGTCGTGGGCACCGAGAACTCGGCGTCGGCGGCGCACGAGGCGCACGGCCACGCCACGGCCAGCCACGACGCCG CCAGCCACGGGACCACCGGCCACGAGGCGCGGGCCCGGTCGATCTCGAAAGCGCGTTTCCAGGACCGGATGCGCAAGCTC TGGGAGGACCACGTCACCTGGACCCGGTTGGCGATCGTCACGTTCGCCGACGGCTCCGCATCCTTCGATGCCACCGCCGG TCGGCTGCTGAAGAACCAGGAGGACATCGGCGACGCGATCAAGCCCTACTACGGCAAGGCGGCCGGCAACCAGCTGACGT CACTGCTGAAGGACCACATCACGATCGCCGTCCGTCTCCTCCAGGCCGCCAAGGACGGGGATGACGCCGCCTTCCAGCAG GCGCACGCCGACTGGTATGCCAACTCCGACGACATCGCCGACTTCCTCGCCCAGGCGAACCCGCGCTACTGGCCGCAGGA CGCGATGCGCGCGGCGATGAGGACGCACCTCGACCAGACCCTCGCCGAGGCGAGCCACGAGCTCACCGGCGACTACGCGG CGAGCGTGGCGGACTACGACGAGATCCACCAGCACATCCTGATGATGTCCGACACGCTCACCCGCGGCATCGTCCGCACC TTCCCGAAGCGCTTCCACTGA
Upstream 100 bases:
>100_bases CCCACCCCGAGCCCTTCGACGCCCTCGGCCTGGTGACGTCCGCGCTCGAGGTGGTGGGGGCCGTCCTGGCTGTCCTGCAT CTCAACCCAAGGAGAATCCG
Downstream 100 bases:
>100_bases GGGACGGCACCGCGACCAGGCTCAGGCGGCGGGTGTCACGCACCCGCCGCCCGAGCCGACCAGCTCCAACCCGGCGAGGT CGCCGGCCCCCCACCGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MNPSMPARRRGGFVALLAGLALATAVATGVVGTENSASAAHEAHGHATASHDAASHGTTGHEARARSISKARFQDRMRKL WEDHVTWTRLAIVTFADGSASFDATAGRLLKNQEDIGDAIKPYYGKAAGNQLTSLLKDHITIAVRLLQAAKDGDDAAFQQ AHADWYANSDDIADFLAQANPRYWPQDAMRAAMRTHLDQTLAEASHELTGDYAASVADYDEIHQHILMMSDTLTRGIVRT FPKRFH
Sequences:
>Translated_246_residues MNPSMPARRRGGFVALLAGLALATAVATGVVGTENSASAAHEAHGHATASHDAASHGTTGHEARARSISKARFQDRMRKL WEDHVTWTRLAIVTFADGSASFDATAGRLLKNQEDIGDAIKPYYGKAAGNQLTSLLKDHITIAVRLLQAAKDGDDAAFQQ AHADWYANSDDIADFLAQANPRYWPQDAMRAAMRTHLDQTLAEASHELTGDYAASVADYDEIHQHILMMSDTLTRGIVRT FPKRFH >Mature_246_residues MNPSMPARRRGGFVALLAGLALATAVATGVVGTENSASAAHEAHGHATASHDAASHGTTGHEARARSISKARFQDRMRKL WEDHVTWTRLAIVTFADGSASFDATAGRLLKNQEDIGDAIKPYYGKAAGNQLTSLLKDHITIAVRLLQAAKDGDDAAFQQ AHADWYANSDDIADFLAQANPRYWPQDAMRAAMRTHLDQTLAEASHELTGDYAASVADYDEIHQHILMMSDTLTRGIVRT FPKRFH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26761; Mature: 26761
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSMPARRRGGFVALLAGLALATAVATGVVGTENSASAAHEAHGHATASHDAASHGTTG CCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC HEARARSISKARFQDRMRKLWEDHVTWTRLAIVTFADGSASFDATAGRLLKNQEDIGDAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCHHHHHHHH KPYYGKAAGNQLTSLLKDHITIAVRLLQAAKDGDDAAFQQAHADWYANSDDIADFLAQAN HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC PRYWPQDAMRAAMRTHLDQTLAEASHELTGDYAASVADYDEIHQHILMMSDTLTRGIVRT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPKRFH HHHHCC >Mature Secondary Structure MNPSMPARRRGGFVALLAGLALATAVATGVVGTENSASAAHEAHGHATASHDAASHGTTG CCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC HEARARSISKARFQDRMRKLWEDHVTWTRLAIVTFADGSASFDATAGRLLKNQEDIGDAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCHHHHHHHH KPYYGKAAGNQLTSLLKDHITIAVRLLQAAKDGDDAAFQQAHADWYANSDDIADFLAQAN HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC PRYWPQDAMRAAMRTHLDQTLAEASHELTGDYAASVADYDEIHQHILMMSDTLTRGIVRT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPKRFH HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA