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The map label for this gene is yurN [H]

Identifier: 119718851

GI number: 119718851

Start: 4914888

End: 4915766

Strand: Reverse

Name: yurN [H]

Synonym: Noca_4634

Alternate gene names: 119718851

Gene position: 4915766-4914888 (Counterclockwise)

Preceding gene: 119718852

Following gene: 119718850

Centisome position: 98.59

GC content: 69.74

Gene sequence:

>879_bases
ATGCACGGTGGGCGCTGGCGCACCCTCGGGTGGGTCGTCGTGTTCCTCGCTCCCAGCGCGGTGCCACTCGTGCTGTTCAC
CGCTGTGCCCATGGTCTCCTCCGCCTGGGTGAGCCTCCACGAGTGGAACCTGATCTCGCCGATGCGGTGGGTGGGGCTCG
ACAACTACCGGGAGCTGCTGACCGACCCCGCGACCCGAGAGGTCTTCTGGCACACGCTGCTGTACGTGGCGGGCTACCTG
CCGCTGGTGTACGTCGGAGGGCTGGGACTGGCGACGGCCCTCAACCGCCGGATGCCGGCCAACGCGTTCTTCCGGGCCGC
CTACTTCCTGCCGGTCGTCACCAGCTGGGTCGTGGTCGCGCTGGTGTGGAAGTGGCTGCTCAACCCCGGCGGCGGTCTCG
TCAACGCGCTGCTGGGCGCCGCCGGCCTCGGCCAGCCCGGGTGGTGGACCGACCCCGCGTGGGCGCTGCCGTCGGTGATC
GTCGCCTCGGCGTGGAAGGACCTCGGCTTCGTGATGGTGATCCTGCTCGCGGGTCTGCAGTCGATCCCCGGTGACGTGCT
CGAGGCCGCCGACGTCGACGGTGCCACCGGCTGGAGGCGGTTCTTGCACGTGACCCTGCCGCTGCTGTCGCCGTCCACGT
TCTTCGTGGTCGTGATCTCGCTGATCAACGGGTTCCAGGTCTTCGACCAGGTCTTCGTGATGACCGGCGGCGGGCCCGCG
GGGTCCAGCCAGGTCGTGGTCGGCCAGATCTACGACCTCACCTTCCGCTACGGCCGTGCCGGCGAGGCCTCCGCCCTCTC
GTGGCTCCTGTTCGTCGTGATCCTCGCGATCACCGCGGTCCAGATCCGGGGCCAGCGCCGGTGGGTGCACCATGTCTGA

Upstream 100 bases:

>100_bases
CCAGTCTGGTGCTCGCCGCCCCGTTCGACTCGACCGACACGACCGGCGAGCAGGGCCGCCTGGTGCGGGCCCGTCTGCAG
GACCCCGAGGGCGGTGCCTG

Downstream 100 bases:

>100_bases
GCCCGCCCGCAGCCGGTTCCGCTCCGCGGCCGTCCTCGCCCTGGTGGTCCTGGGCGCTGTGGTCATGCTGTTCCCGTTCC
TCTGGACGGTGATCACCTCG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MHGGRWRTLGWVVVFLAPSAVPLVLFTAVPMVSSAWVSLHEWNLISPMRWVGLDNYRELLTDPATREVFWHTLLYVAGYL
PLVYVGGLGLATALNRRMPANAFFRAAYFLPVVTSWVVVALVWKWLLNPGGGLVNALLGAAGLGQPGWWTDPAWALPSVI
VASAWKDLGFVMVILLAGLQSIPGDVLEAADVDGATGWRRFLHVTLPLLSPSTFFVVVISLINGFQVFDQVFVMTGGGPA
GSSQVVVGQIYDLTFRYGRAGEASALSWLLFVVILAITAVQIRGQRRWVHHV

Sequences:

>Translated_292_residues
MHGGRWRTLGWVVVFLAPSAVPLVLFTAVPMVSSAWVSLHEWNLISPMRWVGLDNYRELLTDPATREVFWHTLLYVAGYL
PLVYVGGLGLATALNRRMPANAFFRAAYFLPVVTSWVVVALVWKWLLNPGGGLVNALLGAAGLGQPGWWTDPAWALPSVI
VASAWKDLGFVMVILLAGLQSIPGDVLEAADVDGATGWRRFLHVTLPLLSPSTFFVVVISLINGFQVFDQVFVMTGGGPA
GSSQVVVGQIYDLTFRYGRAGEASALSWLLFVVILAITAVQIRGQRRWVHHV
>Mature_292_residues
MHGGRWRTLGWVVVFLAPSAVPLVLFTAVPMVSSAWVSLHEWNLISPMRWVGLDNYRELLTDPATREVFWHTLLYVAGYL
PLVYVGGLGLATALNRRMPANAFFRAAYFLPVVTSWVVVALVWKWLLNPGGGLVNALLGAAGLGQPGWWTDPAWALPSVI
VASAWKDLGFVMVILLAGLQSIPGDVLEAADVDGATGWRRFLHVTLPLLSPSTFFVVVISLINGFQVFDQVFVMTGGGPA
GSSQVVVGQIYDLTFRYGRAGEASALSWLLFVVILAITAVQIRGQRRWVHHV

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=299, Percent_Identity=29.7658862876254, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1787570, Length=257, Percent_Identity=31.9066147859922, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1790465, Length=197, Percent_Identity=28.4263959390863, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31934; Mature: 31934

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGGRWRTLGWVVVFLAPSAVPLVLFTAVPMVSSAWVSLHEWNLISPMRWVGLDNYRELL
CCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHH
TDPATREVFWHTLLYVAGYLPLVYVGGLGLATALNRRMPANAFFRAAYFLPVVTSWVVVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LVWKWLLNPGGGLVNALLGAAGLGQPGWWTDPAWALPSVIVASAWKDLGFVMVILLAGLQ
HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIPGDVLEAADVDGATGWRRFLHVTLPLLSPSTFFVVVISLINGFQVFDQVFVMTGGGPA
HCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCC
GSSQVVVGQIYDLTFRYGRAGEASALSWLLFVVILAITAVQIRGQRRWVHHV
CCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MHGGRWRTLGWVVVFLAPSAVPLVLFTAVPMVSSAWVSLHEWNLISPMRWVGLDNYRELL
CCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHH
TDPATREVFWHTLLYVAGYLPLVYVGGLGLATALNRRMPANAFFRAAYFLPVVTSWVVVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LVWKWLLNPGGGLVNALLGAAGLGQPGWWTDPAWALPSVIVASAWKDLGFVMVILLAGLQ
HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIPGDVLEAADVDGATGWRRFLHVTLPLLSPSTFFVVVISLINGFQVFDQVFVMTGGGPA
HCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCC
GSSQVVVGQIYDLTFRYGRAGEASALSWLLFVVILAITAVQIRGQRRWVHHV
CCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]