| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is bglA [H]
Identifier: 119718804
GI number: 119718804
Start: 4856993
End: 4858390
Strand: Reverse
Name: bglA [H]
Synonym: Noca_4587
Alternate gene names: 119718804
Gene position: 4858390-4856993 (Counterclockwise)
Preceding gene: 119718805
Following gene: 119718802
Centisome position: 97.44
GC content: 70.89
Gene sequence:
>1398_bases GTGCCCCCCGCGTCCCCCGACAGCTCCCCCGGCAGCCGCTCCGGCAGCCCTGCGGGCAGCTCCCTCCCGCAGCTCCCTCC CGGCTTCCGGTTCGGCACCAGCACGGCGTCGTACCAGATCGAGGGCGCGGCGACGGAGGACGGCAAGGGCCCCAGCGTGT GGGACACCTTCACCGCCGAGGAGGGCCGGATCGTCGACGGCTCGAGCGGAGCGGTCGCGTGCGACCACTACCACCGCTAC GGCGAGGACGTGGCGCTGATGAAGCGCCTGGGCGCCGGCGGCTACCGCTTCTCGCTGTCCTGGCCGCGGATCCAGCCCAC CGGCTCGGGTCCGGCGAACCCGAAGGGCCTGGACTTCTACGACCGCTTGATCGACGAGCTGCTCGCCAACGGCGTGCAGC CGATGGCCACCCTCTACCACTGGGACCTGCCCCAGGCGCTCGAGGACGACGGCGGCTGGCTGAACCGCGCCACCGTCGAC CGCTTCGCGGAGTACGCCGCGATCGTCGGGGAGCGGTTCGCCGACCGGGTCGAGCACTGGATCCCCGTCAACGAGCCCAA CGTCGTGATGATGATGGGCTACGCGGTCGGCTTCCAGGCGCCCGGCCGGACGCTGATGTTCGACTCGATGCCGGTCGCCC ACCACCTGCTGCTCGCGCACGGCCGCGCCGCAGTCGAGCTGCGCGCCGCCGGCGCCACCAGCATCGGCTGCGCCAACAAC CACTCGCCGATGTGGCCGGCCAGCGACGACGAGGCGGACGTCGGTGCGACCAAGCTCTTCGACGCGTTGTGGAACGGCAT GTTCACCGAGCCGATGCTGCTCGGCCGCTACCCCGCCGACCTGCAGCCGCTGATGGCCGACGTGGTCTGCGACGGCGACC TGTCGGTGATCCGCCAGCCGCTCGACTTCTACGGCGTCAACTACTACCACCCGTTCAAGATCGGCGCCGCCCGCGAGGAC GCCGAGATGCCCTTCGAGTTCCGCGAGCTGGTCGGCTACCCGACCACGGACTTCGGCTGGCCGGTGGTGCCCGACGCGTT GCGCGAGTGGCTGATCACGCTGCGGGCCCGCTACCGGGCCGCGCTACCGCCGATCTACATCACCGAGTCCGGCTGTTCCT ACAACATGGGCCCCGACGAGTTCGGCGTCGTCGACGACCAGCCGCGCATCGACTACCTCGACGCCCACCTGCGGGCGGTC GCGACCGCCTGCCAGCGCGGCGTCGACGTACGCGGCTACTACACGTGGTCGCTGATGGACAACTTCGAGTGGTCCGAGGG CTACACCCAGCGCTTCGGCCTCGTGCACGTCGACTTCGACACCCAGGTGCGCACCCCCAAGCGCTCCTTCCAGTGGTACG CCGACGTGATCGCCCGGCAGACCCGCTCCGTGGGCTGA
Upstream 100 bases:
>100_bases CGCCGAAGGCGAACGAGTGCCGGGTGAAGAATCCGGCCCCGCGGGTGAGGTACCGATCAGTTCCCCGGCGGATCTCGACG CTCACCGGCATCATTGTGCC
Downstream 100 bases:
>100_bases CGCGCGTCACATGCCGGGCGGTCGGCGTCAGATCGAGTGGCGCACGGCCATCGTGGCGCGCACGGCGTCCTCGTCGAAGT CCTCGCCGAGCCAGTCGAAC
Product: beta-glucosidase
Products: NA
Alternate protein names: Amygdalase; Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MPPASPDSSPGSRSGSPAGSSLPQLPPGFRFGTSTASYQIEGAATEDGKGPSVWDTFTAEEGRIVDGSSGAVACDHYHRY GEDVALMKRLGAGGYRFSLSWPRIQPTGSGPANPKGLDFYDRLIDELLANGVQPMATLYHWDLPQALEDDGGWLNRATVD RFAEYAAIVGERFADRVEHWIPVNEPNVVMMMGYAVGFQAPGRTLMFDSMPVAHHLLLAHGRAAVELRAAGATSIGCANN HSPMWPASDDEADVGATKLFDALWNGMFTEPMLLGRYPADLQPLMADVVCDGDLSVIRQPLDFYGVNYYHPFKIGAARED AEMPFEFRELVGYPTTDFGWPVVPDALREWLITLRARYRAALPPIYITESGCSYNMGPDEFGVVDDQPRIDYLDAHLRAV ATACQRGVDVRGYYTWSLMDNFEWSEGYTQRFGLVHVDFDTQVRTPKRSFQWYADVIARQTRSVG
Sequences:
>Translated_465_residues MPPASPDSSPGSRSGSPAGSSLPQLPPGFRFGTSTASYQIEGAATEDGKGPSVWDTFTAEEGRIVDGSSGAVACDHYHRY GEDVALMKRLGAGGYRFSLSWPRIQPTGSGPANPKGLDFYDRLIDELLANGVQPMATLYHWDLPQALEDDGGWLNRATVD RFAEYAAIVGERFADRVEHWIPVNEPNVVMMMGYAVGFQAPGRTLMFDSMPVAHHLLLAHGRAAVELRAAGATSIGCANN HSPMWPASDDEADVGATKLFDALWNGMFTEPMLLGRYPADLQPLMADVVCDGDLSVIRQPLDFYGVNYYHPFKIGAARED AEMPFEFRELVGYPTTDFGWPVVPDALREWLITLRARYRAALPPIYITESGCSYNMGPDEFGVVDDQPRIDYLDAHLRAV ATACQRGVDVRGYYTWSLMDNFEWSEGYTQRFGLVHVDFDTQVRTPKRSFQWYADVIARQTRSVG >Mature_464_residues PPASPDSSPGSRSGSPAGSSLPQLPPGFRFGTSTASYQIEGAATEDGKGPSVWDTFTAEEGRIVDGSSGAVACDHYHRYG EDVALMKRLGAGGYRFSLSWPRIQPTGSGPANPKGLDFYDRLIDELLANGVQPMATLYHWDLPQALEDDGGWLNRATVDR FAEYAAIVGERFADRVEHWIPVNEPNVVMMMGYAVGFQAPGRTLMFDSMPVAHHLLLAHGRAAVELRAAGATSIGCANNH SPMWPASDDEADVGATKLFDALWNGMFTEPMLLGRYPADLQPLMADVVCDGDLSVIRQPLDFYGVNYYHPFKIGAAREDA EMPFEFRELVGYPTTDFGWPVVPDALREWLITLRARYRAALPPIYITESGCSYNMGPDEFGVVDDQPRIDYLDAHLRAVA TACQRGVDVRGYYTWSLMDNFEWSEGYTQRFGLVHVDFDTQVRTPKRSFQWYADVIARQTRSVG
Specific function: Can Hydrolyze Salicin And Arbutin. [C]
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI32481206, Length=467, Percent_Identity=36.1884368308351, Blast_Score=268, Evalue=9e-72, Organism=Homo sapiens, GI110681710, Length=487, Percent_Identity=32.8542094455852, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI13273313, Length=469, Percent_Identity=35.8208955223881, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI28376633, Length=452, Percent_Identity=29.8672566371681, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI24497614, Length=481, Percent_Identity=32.8482328482328, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI190360571, Length=97, Percent_Identity=46.3917525773196, Blast_Score=89, Evalue=1e-17, Organism=Escherichia coli, GI2367270, Length=472, Percent_Identity=31.3559322033898, Blast_Score=196, Evalue=4e-51, Organism=Escherichia coli, GI2367174, Length=474, Percent_Identity=30.8016877637131, Blast_Score=193, Evalue=2e-50, Organism=Escherichia coli, GI1789070, Length=480, Percent_Identity=29.5833333333333, Blast_Score=172, Evalue=5e-44, Organism=Caenorhabditis elegans, GI17552856, Length=468, Percent_Identity=34.1880341880342, Blast_Score=254, Evalue=6e-68, Organism=Caenorhabditis elegans, GI17539390, Length=474, Percent_Identity=33.1223628691983, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI21356577, Length=496, Percent_Identity=33.8709677419355, Blast_Score=244, Evalue=8e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017736 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 51420; Mature: 51289
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00653 GLYCOSYL_HYDROL_F1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPASPDSSPGSRSGSPAGSSLPQLPPGFRFGTSTASYQIEGAATEDGKGPSVWDTFTAE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC EGRIVDGSSGAVACDHYHRYGEDVALMKRLGAGGYRFSLSWPRIQPTGSGPANPKGLDFY CCEEEECCCCCEECHHHHHHCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHH DRLIDELLANGVQPMATLYHWDLPQALEDDGGWLNRATVDRFAEYAAIVGERFADRVEHW HHHHHHHHHCCCCHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC IPVNEPNVVMMMGYAVGFQAPGRTLMFDSMPVAHHLLLAHGRAAVELRAAGATSIGCANN CCCCCCCEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEECCCCEECCCCC HSPMWPASDDEADVGATKLFDALWNGMFTEPMLLGRYPADLQPLMADVVCDGDLSVIRQP CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHCCCCHHHHHCC LDFYGVNYYHPFKIGAAREDAEMPFEFRELVGYPTTDFGWPVVPDALREWLITLRARYRA HHHHCCCEECCEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALPPIYITESGCSYNMGPDEFGVVDDQPRIDYLDAHLRAVATACQRGVDVRGYYTWSLMD CCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC NFEWSEGYTQRFGLVHVDFDTQVRTPKRSFQWYADVIARQTRSVG CCCCCCCHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PPASPDSSPGSRSGSPAGSSLPQLPPGFRFGTSTASYQIEGAATEDGKGPSVWDTFTAE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC EGRIVDGSSGAVACDHYHRYGEDVALMKRLGAGGYRFSLSWPRIQPTGSGPANPKGLDFY CCEEEECCCCCEECHHHHHHCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHH DRLIDELLANGVQPMATLYHWDLPQALEDDGGWLNRATVDRFAEYAAIVGERFADRVEHW HHHHHHHHHCCCCHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC IPVNEPNVVMMMGYAVGFQAPGRTLMFDSMPVAHHLLLAHGRAAVELRAAGATSIGCANN CCCCCCCEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEECCCCEECCCCC HSPMWPASDDEADVGATKLFDALWNGMFTEPMLLGRYPADLQPLMADVVCDGDLSVIRQP CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHCCCCHHHHHCC LDFYGVNYYHPFKIGAAREDAEMPFEFRELVGYPTTDFGWPVVPDALREWLITLRARYRA HHHHCCCEECCEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALPPIYITESGCSYNMGPDEFGVVDDQPRIDYLDAHLRAVATACQRGVDVRGYYTWSLMD CCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC NFEWSEGYTQRFGLVHVDFDTQVRTPKRSFQWYADVIARQTRSVG CCCCCCCHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8481013 [H]