Click here to switch to the map view.

The map label for this gene is 119718776

Identifier: 119718776

GI number: 119718776

Start: 4822321

End: 4822920

Strand: Reverse

Name: 119718776

Synonym: Noca_4557

Alternate gene names: NA

Gene position: 4822920-4822321 (Counterclockwise)

Preceding gene: 119718779

Following gene: 119718775

Centisome position: 96.73

GC content: 76.17

Gene sequence:

>600_bases
GTGCCGCGGGTGCCCCAGGAGGAGCGCACCCGGCTGATGCGGGCCCGGCTGCTGGAGGCCACGGTCGAGTGCCTGGTCGA
GCGCGGCTTCGCCGGCACGTCGACGACGCTGGTCTCCGAGCGGGCCGGGGTCAGCCGCGGGGCGCAGCTGCACCACTTCC
CGACCAAGAACGACCTGGTCGTGGCGGCGGTCGAGCACCTCACCGAGAAGCGCGGCGCGGAGCTCGCGGCCGCCGCGGTG
GGACTGCCGGCCGGCCGGCGGCGGACCCGCGCGGTGCTGCAGATGCTCGCCGACCACTTCACCGCGCCGGTCTTCACCGC
CGCCCTGGAGCTGTGGGTCGCGGCCCGCACCGATCCGGCGCTGCTCGCCGCCGTCGGCCCGCTGGAGCTGCGGGTGGGCC
GGGAGACGCACCGGATGACCGTCGAGCTGCTCGGCGCCGACGAGTCCCGCACCGGCACCCGCGAGCTCGTGCAGGCCACC
CTCGACCTGGTCCGCGGCCTGGGCCTCGCGAACACGATCACCGACGACGCCCGCCGCCGCGGGCGCATCCTCGACCGCTG
GGCCGAGGTGCTCGACCAGCACCTGAAGGAGACCGCATGA

Upstream 100 bases:

>100_bases
CGCGTAAACGTCAGGGACTATCCCGAATAAAAAGACAGGCTTGACTGTTTGTTGTGCGCGCGGCCATGCTGTGGCGGTGA
CGACGGCGACGGGTGGGGCG

Downstream 100 bases:

>100_bases
GTCTGCTCGACGACCTCCTCGACGACCTCAGGGCCGAGGGCGACCGGCTGTGGAACGCCGTCGCCGGCCTGGACGAGGAC
GGCTGGCAGGCCCCGACCCC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Tetr Family Transcriptional Regulator; Transcriptional Regulator Tetr Family; Transcriptional Regulator TetR

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MPRVPQEERTRLMRARLLEATVECLVERGFAGTSTTLVSERAGVSRGAQLHHFPTKNDLVVAAVEHLTEKRGAELAAAAV
GLPAGRRRTRAVLQMLADHFTAPVFTAALELWVAARTDPALLAAVGPLELRVGRETHRMTVELLGADESRTGTRELVQAT
LDLVRGLGLANTITDDARRRGRILDRWAEVLDQHLKETA

Sequences:

>Translated_199_residues
MPRVPQEERTRLMRARLLEATVECLVERGFAGTSTTLVSERAGVSRGAQLHHFPTKNDLVVAAVEHLTEKRGAELAAAAV
GLPAGRRRTRAVLQMLADHFTAPVFTAALELWVAARTDPALLAAVGPLELRVGRETHRMTVELLGADESRTGTRELVQAT
LDLVRGLGLANTITDDARRRGRILDRWAEVLDQHLKETA
>Mature_198_residues
PRVPQEERTRLMRARLLEATVECLVERGFAGTSTTLVSERAGVSRGAQLHHFPTKNDLVVAAVEHLTEKRGAELAAAAVG
LPAGRRRTRAVLQMLADHFTAPVFTAALELWVAARTDPALLAAVGPLELRVGRETHRMTVELLGADESRTGTRELVQATL
DLVRGLGLANTITDDARRRGRILDRWAEVLDQHLKETA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21807; Mature: 21676

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRVPQEERTRLMRARLLEATVECLVERGFAGTSTTLVSERAGVSRGAQLHHFPTKNDLV
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHH
VAAVEHLTEKRGAELAAAAVGLPAGRRRTRAVLQMLADHFTAPVFTAALELWVAARTDPA
HHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
LLAAVGPLELRVGRETHRMTVELLGADESRTGTRELVQATLDLVRGLGLANTITDDARRR
HHHHCCCHHEEECCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GRILDRWAEVLDQHLKETA
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRVPQEERTRLMRARLLEATVECLVERGFAGTSTTLVSERAGVSRGAQLHHFPTKNDLV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHH
VAAVEHLTEKRGAELAAAAVGLPAGRRRTRAVLQMLADHFTAPVFTAALELWVAARTDPA
HHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
LLAAVGPLELRVGRETHRMTVELLGADESRTGTRELVQATLDLVRGLGLANTITDDARRR
HHHHCCCHHEEECCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GRILDRWAEVLDQHLKETA
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA