| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718766
Identifier: 119718766
GI number: 119718766
Start: 4810090
End: 4810854
Strand: Reverse
Name: 119718766
Synonym: Noca_4547
Alternate gene names: NA
Gene position: 4810854-4810090 (Counterclockwise)
Preceding gene: 119718767
Following gene: 119718764
Centisome position: 96.49
GC content: 70.85
Gene sequence:
>765_bases TTGCGTGCCGCGCGTGGCCGAGGCAGGTTGCCGGCCATGACCAGCAGCGATCTCTGGGACGCCGAGACGGCCGAACGGTA CGACGCGTCGTCGGCGTTCATGTTCACGCCCGAGGTCCTCGACCCGGCCGTCGACTTCCTGGCCGACCTGGCCGGAGGCG GTCCGGCGCTCGAGCTCGCCATCGGCACCGGCCGCGTCGCGCTGCCACTGATCGAGCGCGGTGTCCCGGTGAGCGGCATC GAGCTCTCGCAGCCGATGGTCGACCAGCTCCGGGCCAAGCGACGGGGGGTGCCGGTGGTCCTGGGCGACATGGCGACGAC CCGCGTGCCGGGCGAGTACTCGCTGGTCTACGTCGTGTGGAACAGCATCGGCAACCTGCGCACGCAGGACGAGCAGGTGG CCTGCTTCTGCAACGCTGCCGCGCACCTGGCGCCGGGTGGCCGCTTCGTGATCGAGCTGGGAGTCCCGAGCCTGAGGCGG TTCCCGCCCGGCCAGCAGGGCGTCCCGTTCCACATCGGCGAGCACCATCTCGGCGTCGACACGTTCGACCTGACGACCCA GCAGGGCACCTCCCACCACTACACGCGGCACGATGACGGCACCGTCACCTACGGCGCGAGCAACTTCCGCTACATCTGGC CCGCCGAGTGCGACCTGATGGCCCAGCTGGCCGGCCTGGCCTTCGAGGCTCGGTTCGCCGACTGGCGCCGCTCGCCGTTC ACCGGCGACAGCGAGAGCCATGTCTCCGTCTGGCGCAAGCCCTGA
Upstream 100 bases:
>100_bases CCCACCGTCGCGATGCCGGTCATCGAGGACGAGGGCCATGAGGAGACGGACAGGCCGGATCGGCCGGACGGGCCCGAGGC GTAGGCCGGGCGAAAGTCGG
Downstream 100 bases:
>100_bases GGGCCCGGTCGTCAGCAGCCGTTCGCGGGCTGCCGCTTCAGCTTGTCCCGGCTGATCGTCTGGCGACCGGAGGCGAGCGG GAAGCCGCGTTGCCAGTCCG
Product: type 11 methyltransferase
Products: NA
Alternate protein names: Methyltransferase Type; Methyltransferase Protein; Methyltransferase Family Protein; SAM-Dependent Methyltransferase; Dimethyladenosine Transferase; Methyltransferase Domain Family; Hydroxybutyryl-CoA Reductase For Ethylmalonate Biosynthesis
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MRAARGRGRLPAMTSSDLWDAETAERYDASSAFMFTPEVLDPAVDFLADLAGGGPALELAIGTGRVALPLIERGVPVSGI ELSQPMVDQLRAKRRGVPVVLGDMATTRVPGEYSLVYVVWNSIGNLRTQDEQVACFCNAAAHLAPGGRFVIELGVPSLRR FPPGQQGVPFHIGEHHLGVDTFDLTTQQGTSHHYTRHDDGTVTYGASNFRYIWPAECDLMAQLAGLAFEARFADWRRSPF TGDSESHVSVWRKP
Sequences:
>Translated_254_residues MRAARGRGRLPAMTSSDLWDAETAERYDASSAFMFTPEVLDPAVDFLADLAGGGPALELAIGTGRVALPLIERGVPVSGI ELSQPMVDQLRAKRRGVPVVLGDMATTRVPGEYSLVYVVWNSIGNLRTQDEQVACFCNAAAHLAPGGRFVIELGVPSLRR FPPGQQGVPFHIGEHHLGVDTFDLTTQQGTSHHYTRHDDGTVTYGASNFRYIWPAECDLMAQLAGLAFEARFADWRRSPF TGDSESHVSVWRKP >Mature_254_residues MRAARGRGRLPAMTSSDLWDAETAERYDASSAFMFTPEVLDPAVDFLADLAGGGPALELAIGTGRVALPLIERGVPVSGI ELSQPMVDQLRAKRRGVPVVLGDMATTRVPGEYSLVYVVWNSIGNLRTQDEQVACFCNAAAHLAPGGRFVIELGVPSLRR FPPGQQGVPFHIGEHHLGVDTFDLTTQQGTSHHYTRHDDGTVTYGASNFRYIWPAECDLMAQLAGLAFEARFADWRRSPF TGDSESHVSVWRKP
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27737; Mature: 27737
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAARGRGRLPAMTSSDLWDAETAERYDASSAFMFTPEVLDPAVDFLADLAGGGPALELA CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCEEEEE IGTGRVALPLIERGVPVSGIELSQPMVDQLRAKRRGVPVVLGDMATTRVPGEYSLVYVVW ECCCCEEEHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHCCCCCCEEEEEEEE NSIGNLRTQDEQVACFCNAAAHLAPGGRFVIELGVPSLRRFPPGQQGVPFHIGEHHLGVD CCCCCCCCCCCCEEEEECCHHHCCCCCEEEEEECCCHHHCCCCCCCCCCEEECCCCCCCC TFDLTTQQGTSHHYTRHDDGTVTYGASNFRYIWPAECDLMAQLAGLAFEARFADWRRSPF EEECCCCCCCCCCCEECCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCC TGDSESHVSVWRKP CCCCCCCEEEECCC >Mature Secondary Structure MRAARGRGRLPAMTSSDLWDAETAERYDASSAFMFTPEVLDPAVDFLADLAGGGPALELA CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCEEEEE IGTGRVALPLIERGVPVSGIELSQPMVDQLRAKRRGVPVVLGDMATTRVPGEYSLVYVVW ECCCCEEEHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHCCCCCCEEEEEEEE NSIGNLRTQDEQVACFCNAAAHLAPGGRFVIELGVPSLRRFPPGQQGVPFHIGEHHLGVD CCCCCCCCCCCCEEEEECCHHHCCCCCEEEEEECCCHHHCCCCCCCCCCEEECCCCCCCC TFDLTTQQGTSHHYTRHDDGTVTYGASNFRYIWPAECDLMAQLAGLAFEARFADWRRSPF EEECCCCCCCCCCCEECCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCC TGDSESHVSVWRKP CCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA