| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is yqiG [H]
Identifier: 119718763
GI number: 119718763
Start: 4806562
End: 4807629
Strand: Reverse
Name: yqiG [H]
Synonym: Noca_4544
Alternate gene names: 119718763
Gene position: 4807629-4806562 (Counterclockwise)
Preceding gene: 119718764
Following gene: 119718759
Centisome position: 96.43
GC content: 75.37
Gene sequence:
>1068_bases GTGCCCGCCCTCTCCGACTCGCTCTCGTTCGACCACGGCCCGGAGTGGCGCAACCGCCTCGCGCTGGCGCCGCTCACCAA CACCCAGAGCCACCCGGACGGCACCCTGTCCGAGGACGAGACCCGCTGGCTGGAGGCCCGGGGTGAGGGCGGGTTCGGGC TCGTGATGACGGCCGCGGCGTACGTCGCCCCTGCCGGACACGCGTGGGCCGGCCAGCTCGGCGTCGCCACCGACGCGCAC CTGCCGGGGCTCACGGAGCTCGCGGGACGGCTGCGCGCGACGGGGGCTCGCTCGTCCGTGCAGCTCCACCACGGCGGTCG CCGCGCCGACCCGGCGCTCAGCGGGCGGCCGAACCAGTGCCCGTGGGACGACCCGGCCAAGCACGCCGTCGCGATGACCA CCGGCGAGATCGAGCAGCTGGTGGCCGACTTCGTGGCGGCGGCCCTCCGGGCCGAGCGGGCCGGCTTCGACGGGGCCGAG GTGCACGGGGCGCACGGCTACCTGCTCGGGCAGTTCCTCGACGGCCGCAACCAGCGCACCGACGGGTACGGCGGCTCCCT CGACCACCGGATCCGCGTGGTCCTCGAGGTGGTCGAGGGCATCCGGGCGGCCACCGGGCCGGACTTCCAGCTCGGCCTGC GGCTGACCCCCGAGGGCAACGGCATCACCCTCGAGGAGGGCCGCGAGACGGCGCGCCGGATGCTGGCCTCCGGTGTGCTG GACTACCTCGACATGTCGTTGTGGGACGTCTTCATGCATCCCCGAGGCGGTGCTCCCGGGCTGCTCATCGAGCACTTCAC CGACCTGCCCCGCGGCGCGACCCGGCTCGGGGTGGCCGGCCGGGTGCTGTCGGGCGCCGACGCGCGGTGGTGCCTGGAGC AGGGCGCGGACATCGTGACCGTCGGCTTCGGCGCGATCTTCCACCACGACTTCGCGGCGCGGGTGCTCGCCGACCCCGAG TTCGCCGCGCGCCGCGGCCCGCTGAGCCGCGAGGAGCTCCGCGCCGAGGCGATCGGGCCGGCCTTCATCGACTACCTGGC CGCCGGCTGGGAGAACGTCGTCGCGTGA
Upstream 100 bases:
>100_bases CAGCCCGGCGGCCTTGAGGGAACCTGGAGGTTCGGGCGCCGGACCGCCGGAGGGTCGACCCACGTCGAGCGCCGCCTGGC GTGGCAGGGAGGATGGCTGC
Downstream 100 bases:
>100_bases TGCCGGCCAGGTGCGCCACCGCCCGCCAGCCCAGCATCGTCGCGGCCAGGAACAGGGCCGCCACCACGAGGAAGCCGGGC GCCAGACCGCGACCCGAGAT
Product: NADH:flavin oxidoreductase/NADH oxidase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MPALSDSLSFDHGPEWRNRLALAPLTNTQSHPDGTLSEDETRWLEARGEGGFGLVMTAAAYVAPAGHAWAGQLGVATDAH LPGLTELAGRLRATGARSSVQLHHGGRRADPALSGRPNQCPWDDPAKHAVAMTTGEIEQLVADFVAAALRAERAGFDGAE VHGAHGYLLGQFLDGRNQRTDGYGGSLDHRIRVVLEVVEGIRAATGPDFQLGLRLTPEGNGITLEEGRETARRMLASGVL DYLDMSLWDVFMHPRGGAPGLLIEHFTDLPRGATRLGVAGRVLSGADARWCLEQGADIVTVGFGAIFHHDFAARVLADPE FAARRGPLSREELRAEAIGPAFIDYLAAGWENVVA
Sequences:
>Translated_355_residues MPALSDSLSFDHGPEWRNRLALAPLTNTQSHPDGTLSEDETRWLEARGEGGFGLVMTAAAYVAPAGHAWAGQLGVATDAH LPGLTELAGRLRATGARSSVQLHHGGRRADPALSGRPNQCPWDDPAKHAVAMTTGEIEQLVADFVAAALRAERAGFDGAE VHGAHGYLLGQFLDGRNQRTDGYGGSLDHRIRVVLEVVEGIRAATGPDFQLGLRLTPEGNGITLEEGRETARRMLASGVL DYLDMSLWDVFMHPRGGAPGLLIEHFTDLPRGATRLGVAGRVLSGADARWCLEQGADIVTVGFGAIFHHDFAARVLADPE FAARRGPLSREELRAEAIGPAFIDYLAAGWENVVA >Mature_354_residues PALSDSLSFDHGPEWRNRLALAPLTNTQSHPDGTLSEDETRWLEARGEGGFGLVMTAAAYVAPAGHAWAGQLGVATDAHL PGLTELAGRLRATGARSSVQLHHGGRRADPALSGRPNQCPWDDPAKHAVAMTTGEIEQLVADFVAAALRAERAGFDGAEV HGAHGYLLGQFLDGRNQRTDGYGGSLDHRIRVVLEVVEGIRAATGPDFQLGLRLTPEGNGITLEEGRETARRMLASGVLD YLDMSLWDVFMHPRGGAPGLLIEHFTDLPRGATRLGVAGRVLSGADARWCLEQGADIVTVGFGAIFHHDFAARVLADPEF AARRGPLSREELRAEAIGPAFIDYLAAGWENVVA
Specific function: Unknown
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=335, Percent_Identity=29.8507462686567, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1789463, Length=229, Percent_Identity=28.82096069869, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17559804, Length=280, Percent_Identity=33.2142857142857, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17564188, Length=276, Percent_Identity=32.2463768115942, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI72001454, Length=279, Percent_Identity=31.8996415770609, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17559802, Length=279, Percent_Identity=30.8243727598566, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17565138, Length=271, Percent_Identity=30.9963099630996, Blast_Score=103, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17540738, Length=271, Percent_Identity=29.1512915129151, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17566914, Length=262, Percent_Identity=28.2442748091603, Blast_Score=92, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6321973, Length=231, Percent_Identity=31.1688311688312, Blast_Score=97, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6325086, Length=231, Percent_Identity=29.004329004329, Blast_Score=89, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37908; Mature: 37777
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALSDSLSFDHGPEWRNRLALAPLTNTQSHPDGTLSEDETRWLEARGEGGFGLVMTAAA CCCCCCCCCCCCCCCHHHCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHH YVAPAGHAWAGQLGVATDAHLPGLTELAGRLRATGARSSVQLHHGGRRADPALSGRPNQC HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCC PWDDPAKHAVAMTTGEIEQLVADFVAAALRAERAGFDGAEVHGAHGYLLGQFLDGRNQRT CCCCCHHCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHCCCCCCC DGYGGSLDHRIRVVLEVVEGIRAATGPDFQLGLRLTPEGNGITLEEGRETARRMLASGVL CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHH DYLDMSLWDVFMHPRGGAPGLLIEHFTDLPRGATRLGVAGRVLSGADARWCLEQGADIVT HHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCEEE VGFGAIFHHDFAARVLADPEFAARRGPLSREELRAEAIGPAFIDYLAAGWENVVA ECHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PALSDSLSFDHGPEWRNRLALAPLTNTQSHPDGTLSEDETRWLEARGEGGFGLVMTAAA CCCCCCCCCCCCCCHHHCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHH YVAPAGHAWAGQLGVATDAHLPGLTELAGRLRATGARSSVQLHHGGRRADPALSGRPNQC HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCC PWDDPAKHAVAMTTGEIEQLVADFVAAALRAERAGFDGAEVHGAHGYLLGQFLDGRNQRT CCCCCHHCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHCCCCCCC DGYGGSLDHRIRVVLEVVEGIRAATGPDFQLGLRLTPEGNGITLEEGRETARRMLASGVL CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHH DYLDMSLWDVFMHPRGGAPGLLIEHFTDLPRGATRLGVAGRVLSGADARWCLEQGADIVT HHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCEEE VGFGAIFHHDFAARVLADPEFAARRGPLSREELRAEAIGPAFIDYLAAGWENVVA ECHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]