| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718759
Identifier: 119718759
GI number: 119718759
Start: 4804216
End: 4804632
Strand: Reverse
Name: 119718759
Synonym: Noca_4540
Alternate gene names: NA
Gene position: 4804632-4804216 (Counterclockwise)
Preceding gene: 119718763
Following gene: 119718751
Centisome position: 96.36
GC content: 72.42
Gene sequence:
>417_bases GTGACGGCGGGCGCCGTCGGGCAGCAGACTCACGACGTGATCAAGCTCGAGCTGCTTCTCGGTGTCGCGACGTTCGCCCT GTGGGTCTTCTGCCTGGTGGACGCGATCGGCAGCCCCTCCGACCGGATCCGCAACCTGCCCAAGGTGGCGTGGGTGCTGC TGGTCCTGTTCTTCCCGCTCGCCGGGTCGATCGCCTGGCTGGTCGCCGGCCGTCCCGAGACCGGGATGGACCGCCGCTCG GCGTACGAGCGAGAGGCGCCGGACTTCCCGGAGTACGACCGCCGCGGCCGATCCGCCGCCGTCGACCCCGAGAAGGACGC GGAGTTCCTCCGCCAGGTCCGCGAGCGCGCCGAGGCGCAGCGCCGGGCCTACGAGGCCCAGCGCAAGCGCGAGCGCGAGG CCGACGATCAGCAGTAG
Upstream 100 bases:
>100_bases ACGGGCAGGAACCACTCGCGCGGCACCGCCGCGAACGCCTCGTCGACCCGGTCGGGCGCCATGTCGCCCAGTCAACCACC ACACCGGTCCGGGGAAACAG
Downstream 100 bases:
>100_bases CGGTCAGGAGCGCTTCGGCGGCAGCGGCACGAACATCGAGGTGCGCGCGGCGTACTCGGGGTAACCGGGCCGCTGCATCA TCGTCCTCTCCAGCAGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTAGAVGQQTHDVIKLELLLGVATFALWVFCLVDAIGSPSDRIRNLPKVAWVLLVLFFPLAGSIAWLVAGRPETGMDRRS AYEREAPDFPEYDRRGRSAAVDPEKDAEFLRQVRERAEAQRRAYEAQRKREREADDQQ
Sequences:
>Translated_138_residues MTAGAVGQQTHDVIKLELLLGVATFALWVFCLVDAIGSPSDRIRNLPKVAWVLLVLFFPLAGSIAWLVAGRPETGMDRRS AYEREAPDFPEYDRRGRSAAVDPEKDAEFLRQVRERAEAQRRAYEAQRKREREADDQQ >Mature_137_residues TAGAVGQQTHDVIKLELLLGVATFALWVFCLVDAIGSPSDRIRNLPKVAWVLLVLFFPLAGSIAWLVAGRPETGMDRRSA YEREAPDFPEYDRRGRSAAVDPEKDAEFLRQVRERAEAQRRAYEAQRKREREADDQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15672; Mature: 15541
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGAVGQQTHDVIKLELLLGVATFALWVFCLVDAIGSPSDRIRNLPKVAWVLLVLFFPL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHH AGSIAWLVAGRPETGMDRRSAYEREAPDFPEYDRRGRSAAVDPEKDAEFLRQVRERAEAQ HHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHH RRAYEAQRKREREADDQQ HHHHHHHHHHHHCCCCCC >Mature Secondary Structure TAGAVGQQTHDVIKLELLLGVATFALWVFCLVDAIGSPSDRIRNLPKVAWVLLVLFFPL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHH AGSIAWLVAGRPETGMDRRSAYEREAPDFPEYDRRGRSAAVDPEKDAEFLRQVRERAEAQ HHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHH RRAYEAQRKREREADDQQ HHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA