| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is pab [H]
Identifier: 119718746
GI number: 119718746
Start: 4788425
End: 4789738
Strand: Reverse
Name: pab [H]
Synonym: Noca_4527
Alternate gene names: 119718746
Gene position: 4789738-4788425 (Counterclockwise)
Preceding gene: 119718747
Following gene: 119718745
Centisome position: 96.07
GC content: 73.67
Gene sequence:
>1314_bases GTGAGCGACCCCGCCCTCGACCCCGCCCTCGATCCCGCACGCGACCCGGTGGCGTTCTTCCGCGGCGTGGCGGCGGCGTA CCCGCGCTGCTTCTGGCTCGACGGTGGCGGTGCCCGGGAGTGGTCGGGTCGTCGGTCGATGGTCGGCTGGCTGGGCGAGG ACGACGTGTCGCTGACCTACTCCGCGGCCCGCCGGGAGGTGCGCCGGCACGTCGGCGGCAGCTGCGAGGTGGTCGGCGAC GACGTGTTCGTCGTACTCGAGGCCGAGCTGGCCGCCGGCGCGCCCGATGACCACTGGGTGGGCTACCTCGGCTACGCCTG CCGCCCGGACCTGCCCGCCTCGACCGGTCCCGGCCTGCCCGACGCCGTGTGGATGCGGCCGGCGGGCGTCCGGTTCTTCG ACCACGGACTGGGCGGGCAATCCCGGAACTTCCTGGGGGAAGTTCCGGCCCAACAGTTCCGGTTTCCCCGGTTCACCGGG GAAACCGACCCGGCCCCGCCCGCCTACGCCACCGCGTTCGAGGAGGTGCAGGAGCAGCTGCGGGCGGGGAACAGCTACGA GGTCAACCTGACCTACCGGCTGGCGCATCGCAGCGGGGTGGACCCGGTGACGGCGTACCTGAGGCTGCGCGAGCTCAACC CGGCGCCGTACGCCGGGTTCCTCCAGCACGATGTCCGCGACGTGCCGGACGCCCGGGCCTGGCTGCTCAGCTCCAGCCCG GAGCGCTACGCGCTGGTGACCGCCGACCGGAGCATCGAGACCAAGCCGATCAAGGGCACCACGCTGCGCGGCGCGACCCC CGCCGAGGACGAGGCCAGCCGGCACCGGCTCGCGACCGACTCGAAGTTCCGCGCCGAGAACCTGATGATCGTCGACCTGC TCCGCAACGACCTCTCGATGGTGTGCCGCCCGGGGACCGTGAGCGTGCCGGCGCTGATGGACGTCGAGTCCTACGCGACC GTGCACCAGCTGGTCAGCACCGTCCGCGGCGAGCTGCGCGACGACGTCAGCACGGTGCAGGCGCTGCGCGCGCTGTTCCC GGCCGGCTCGATGACCGGCGCGCCGAAGCTGCGCACCATGCAGGTGATCGAGCAGGTCGAGGCCACCGAGCGCGGCCCGT ACGCCGGCGCCTTCGGCTGGGTCTGCGCCGACGGCCGCGCCGACCTCGGCGTGGTCATCCGCAGCCTCGCCAGCACCGGC GACGGCGCCTACCTGCTCGGCACCGGCGGCGGGATCACGGTCCGCTCCGAGGTCGCCGAGGAGTACGCCGAGTCCCGCTG GAAGGCCGACCGGCTGCTGGCTGCGCTCGGCTGA
Upstream 100 bases:
>100_bases TGCGGCACCGGACGTTGCCCCTGGAGGGCGTGCAGTTCCACCCGGAGTCGATCCTCTCCGCGCACGGTGCGGCGCTGGTG GCGAACTTCCTGGGGCTGTC
Downstream 100 bases:
>100_bases GCCGTTCCACCCGCCTGGCTACCCTCGACGGATGGAGAACCCGCACGTCATCGTGCTCTTCGGAGCCACCGGCGACCTCT CCCGGCGCAAGCTGTTGCCG
Product: anthranilate synthase component I/chorismate-binding protein
Products: NA
Alternate protein names: P-aminobenzoic acid synthase; PABA synthase [H]
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MSDPALDPALDPARDPVAFFRGVAAAYPRCFWLDGGGAREWSGRRSMVGWLGEDDVSLTYSAARREVRRHVGGSCEVVGD DVFVVLEAELAAGAPDDHWVGYLGYACRPDLPASTGPGLPDAVWMRPAGVRFFDHGLGGQSRNFLGEVPAQQFRFPRFTG ETDPAPPAYATAFEEVQEQLRAGNSYEVNLTYRLAHRSGVDPVTAYLRLRELNPAPYAGFLQHDVRDVPDARAWLLSSSP ERYALVTADRSIETKPIKGTTLRGATPAEDEASRHRLATDSKFRAENLMIVDLLRNDLSMVCRPGTVSVPALMDVESYAT VHQLVSTVRGELRDDVSTVQALRALFPAGSMTGAPKLRTMQVIEQVEATERGPYAGAFGWVCADGRADLGVVIRSLASTG DGAYLLGTGGGITVRSEVAEEYAESRWKADRLLAALG
Sequences:
>Translated_437_residues MSDPALDPALDPARDPVAFFRGVAAAYPRCFWLDGGGAREWSGRRSMVGWLGEDDVSLTYSAARREVRRHVGGSCEVVGD DVFVVLEAELAAGAPDDHWVGYLGYACRPDLPASTGPGLPDAVWMRPAGVRFFDHGLGGQSRNFLGEVPAQQFRFPRFTG ETDPAPPAYATAFEEVQEQLRAGNSYEVNLTYRLAHRSGVDPVTAYLRLRELNPAPYAGFLQHDVRDVPDARAWLLSSSP ERYALVTADRSIETKPIKGTTLRGATPAEDEASRHRLATDSKFRAENLMIVDLLRNDLSMVCRPGTVSVPALMDVESYAT VHQLVSTVRGELRDDVSTVQALRALFPAGSMTGAPKLRTMQVIEQVEATERGPYAGAFGWVCADGRADLGVVIRSLASTG DGAYLLGTGGGITVRSEVAEEYAESRWKADRLLAALG >Mature_436_residues SDPALDPALDPARDPVAFFRGVAAAYPRCFWLDGGGAREWSGRRSMVGWLGEDDVSLTYSAARREVRRHVGGSCEVVGDD VFVVLEAELAAGAPDDHWVGYLGYACRPDLPASTGPGLPDAVWMRPAGVRFFDHGLGGQSRNFLGEVPAQQFRFPRFTGE TDPAPPAYATAFEEVQEQLRAGNSYEVNLTYRLAHRSGVDPVTAYLRLRELNPAPYAGFLQHDVRDVPDARAWLLSSSPE RYALVTADRSIETKPIKGTTLRGATPAEDEASRHRLATDSKFRAENLMIVDLLRNDLSMVCRPGTVSVPALMDVESYATV HQLVSTVRGELRDDVSTVQALRALFPAGSMTGAPKLRTMQVIEQVEATERGPYAGAFGWVCADGRADLGVVIRSLASTGD GAYLLGTGGGITVRSEVAEEYAESRWKADRLLAALG
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=268, Percent_Identity=39.9253731343284, Blast_Score=191, Evalue=6e-50, Organism=Escherichia coli, GI1787518, Length=289, Percent_Identity=36.3321799307958, Blast_Score=147, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6320935, Length=271, Percent_Identity=34.6863468634686, Blast_Score=158, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6324361, Length=302, Percent_Identity=34.1059602649007, Blast_Score=134, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR006805 - InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR015890 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR005802 - InterPro: IPR006221 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind; PF00117 GATase [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 47389; Mature: 47257
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPALDPALDPARDPVAFFRGVAAAYPRCFWLDGGGAREWSGRRSMVGWLGEDDVSLTY CCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEECCCCCCEEEH SAARREVRRHVGGSCEVVGDDVFVVLEAELAAGAPDDHWVGYLGYACRPDLPASTGPGLP HHHHHHHHHHCCCCEEEECCCEEEEEEEHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCC DAVWMRPAGVRFFDHGLGGQSRNFLGEVPAQQFRFPRFTGETDPAPPAYATAFEEVQEQL CHHHCCCCCCHHEECCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH RAGNSYEVNLTYRLAHRSGVDPVTAYLRLRELNPAPYAGFLQHDVRDVPDARAWLLSSSP HCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHCCCCC ERYALVTADRSIETKPIKGTTLRGATPAEDEASRHRLATDSKFRAENLMIVDLLRNDLSM CCEEEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHH VCRPGTVSVPALMDVESYATVHQLVSTVRGELRDDVSTVQALRALFPAGSMTGAPKLRTM EECCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH QVIEQVEATERGPYAGAFGWVCADGRADLGVVIRSLASTGDGAYLLGTGGGITVRSEVAE HHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCEEEHHHHHH EYAESRWKADRLLAALG HHHHHHHHHHHHHHHCC >Mature Secondary Structure SDPALDPALDPARDPVAFFRGVAAAYPRCFWLDGGGAREWSGRRSMVGWLGEDDVSLTY CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEECCCCCCEEEH SAARREVRRHVGGSCEVVGDDVFVVLEAELAAGAPDDHWVGYLGYACRPDLPASTGPGLP HHHHHHHHHHCCCCEEEECCCEEEEEEEHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCC DAVWMRPAGVRFFDHGLGGQSRNFLGEVPAQQFRFPRFTGETDPAPPAYATAFEEVQEQL CHHHCCCCCCHHEECCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH RAGNSYEVNLTYRLAHRSGVDPVTAYLRLRELNPAPYAGFLQHDVRDVPDARAWLLSSSP HCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHCCCCC ERYALVTADRSIETKPIKGTTLRGATPAEDEASRHRLATDSKFRAENLMIVDLLRNDLSM CCEEEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHH VCRPGTVSVPALMDVESYATVHQLVSTVRGELRDDVSTVQALRALFPAGSMTGAPKLRTM EECCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH QVIEQVEATERGPYAGAFGWVCADGRADLGVVIRSLASTGDGAYLLGTGGGITVRSEVAE HHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCEEEHHHHHH EYAESRWKADRLLAALG HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8472954 [H]