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The map label for this gene is nagZ [H]

Identifier: 119718732

GI number: 119718732

Start: 4773409

End: 4774575

Strand: Reverse

Name: nagZ [H]

Synonym: Noca_4513

Alternate gene names: 119718732

Gene position: 4774575-4773409 (Counterclockwise)

Preceding gene: 119718733

Following gene: 119718731

Centisome position: 95.76

GC content: 74.81

Gene sequence:

>1167_bases
ATGTCGTCGTCGCCTCGTCCCGTCCTGGTCGCGGTCGCGGCCGCTGCCCTGGGGGCCGGGCTGCTGGCGCCCGCCAGCGG
GTCCGCGCACGCGCCTGCGGTGAGCGGCCGGCACCAGGAGACCCGGACGGCGGCGTCGGTGTATCGGGAGATGAGCCTGG
CCCAGCGGGTCGGGCAGCTGTTCATGGTCGGCACCCCCGCGGACCGGGTCGACCGCCGTACCCGCGCCCAGATCCATCGC
TTCCACGTCGGCAACGTGATGCTGACCGGCCGCAGCTATGACGGGGTCCGCGCGCCGGCCCGGGTGTCCCGGGCGATGCG
CGGCGAGGTCGACGGGAGGTCGACCGCCGGCGTCCGGCTCTTCGTCGCGACCGACCAGGAGGGCGGCCAGGTCCGGGTGT
TGCAGGGGCCCGGCTTCTCCGACATCCCCTCGGCCCTGGAGCAGGGCACCTGGCAGCCGCGCCGGCTGCGTGGCGCCGCG
AAGTTGTGGGCCGGGCAGCTGCGCCGGGCCGGCGTGAACCTCGACCTGGCGCCGGTGATGGACACCGTTCCCAGCCGGCG
GGCGGCTCGGCACAACCCGCCGATCGGCCGCTACGACCGCGAGTTCGGCTTCACGACCAAGGTCGTCGCCCGGCACGGGG
TGGCGTTCCTCAACGGCATGGCCGACGGCGGCGTCGTACCGACGGCGAAGCACTTCCCCGGCCTGGGCCGGGTCCACGCG
AACCCCGACACCCACGCCGGCGTCACCGACCGGGTCACGACCCGGCACGACGCCTACCTGCGGCCGTTCGGGGCGGCGAT
CGACGCGGGCGTCCCGATCGTGATGATGTCGACGGCGTACTACGAGCACCTCGACCCGCGGAACCCCGCGGCGTTCTCAC
CGTTCGTGGTCGGCACCATGCTGCGCGGCGACCTCGGGTTCCGCGGCGTGGTCATCTCCGACGACCTGGCCCGGGCCCGG
CAGGTCGCGGGCTTCAGCCCGGCCGGCCGGGCACTGCGGTTCATCGGCGCGGGTGGCGACATCGTGCTCAGCGTCGATGC
CGACCCGGTGGGGGAGATGTACCGCGCGGTCCTCGAGCGCGCCCGGACCAGCGAGCGGTTCCGCGCCAAGGTCGACGCGG
CGGTGCTGCGGGTGCTGCGCGCCAAGCAGGACCGGCACCTGCTGTGA

Upstream 100 bases:

>100_bases
GGGGAGGGCGCCCGGGTCTCGATCGGGGAGACCGAGGCCAACGGCCGGCTGCTTCAGGTGGCCGCAGCCTTCAGCCGCTG
ACGCGGTAGCGTGCCGACGC

Downstream 100 bases:

>100_bases
GCGGGCCGCGCGCGTCCACCCGTAGTTGAAGGCTCACCTAAGGTGGAGGGATGGGCGACGACTCGCGCACCGGCAGGGGC
AGGTACCTCACGTCCGGCGA

Product: glycoside hydrolase family 3 protein

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSSSPRPVLVAVAAAALGAGLLAPASGSAHAPAVSGRHQETRTAASVYREMSLAQRVGQLFMVGTPADRVDRRTRAQIHR
FHVGNVMLTGRSYDGVRAPARVSRAMRGEVDGRSTAGVRLFVATDQEGGQVRVLQGPGFSDIPSALEQGTWQPRRLRGAA
KLWAGQLRRAGVNLDLAPVMDTVPSRRAARHNPPIGRYDREFGFTTKVVARHGVAFLNGMADGGVVPTAKHFPGLGRVHA
NPDTHAGVTDRVTTRHDAYLRPFGAAIDAGVPIVMMSTAYYEHLDPRNPAAFSPFVVGTMLRGDLGFRGVVISDDLARAR
QVAGFSPAGRALRFIGAGGDIVLSVDADPVGEMYRAVLERARTSERFRAKVDAAVLRVLRAKQDRHLL

Sequences:

>Translated_388_residues
MSSSPRPVLVAVAAAALGAGLLAPASGSAHAPAVSGRHQETRTAASVYREMSLAQRVGQLFMVGTPADRVDRRTRAQIHR
FHVGNVMLTGRSYDGVRAPARVSRAMRGEVDGRSTAGVRLFVATDQEGGQVRVLQGPGFSDIPSALEQGTWQPRRLRGAA
KLWAGQLRRAGVNLDLAPVMDTVPSRRAARHNPPIGRYDREFGFTTKVVARHGVAFLNGMADGGVVPTAKHFPGLGRVHA
NPDTHAGVTDRVTTRHDAYLRPFGAAIDAGVPIVMMSTAYYEHLDPRNPAAFSPFVVGTMLRGDLGFRGVVISDDLARAR
QVAGFSPAGRALRFIGAGGDIVLSVDADPVGEMYRAVLERARTSERFRAKVDAAVLRVLRAKQDRHLL
>Mature_387_residues
SSSPRPVLVAVAAAALGAGLLAPASGSAHAPAVSGRHQETRTAASVYREMSLAQRVGQLFMVGTPADRVDRRTRAQIHRF
HVGNVMLTGRSYDGVRAPARVSRAMRGEVDGRSTAGVRLFVATDQEGGQVRVLQGPGFSDIPSALEQGTWQPRRLRGAAK
LWAGQLRRAGVNLDLAPVMDTVPSRRAARHNPPIGRYDREFGFTTKVVARHGVAFLNGMADGGVVPTAKHFPGLGRVHAN
PDTHAGVTDRVTTRHDAYLRPFGAAIDAGVPIVMMSTAYYEHLDPRNPAAFSPFVVGTMLRGDLGFRGVVISDDLARARQ
VAGFSPAGRALRFIGAGGDIVLSVDADPVGEMYRAVLERARTSERFRAKVDAAVLRVLRAKQDRHLL

Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787350, Length=295, Percent_Identity=28.135593220339, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022956
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3 [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 41623; Mature: 41492

Theoretical pI: Translated: 11.78; Mature: 11.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSPRPVLVAVAAAALGAGLLAPASGSAHAPAVSGRHQETRTAASVYREMSLAQRVGQL
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCE
FMVGTPADRVDRRTRAQIHRFHVGNVMLTGRSYDGVRAPARVSRAMRGEVDGRSTAGVRL
EEECCCHHHHHHHHHHHHHHEEECCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEE
FVATDQEGGQVRVLQGPGFSDIPSALEQGTWQPRRLRGAAKLWAGQLRRAGVNLDLAPVM
EEEECCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
DTVPSRRAARHNPPIGRYDREFGFTTKVVARHGVAFLNGMADGGVVPTAKHFPGLGRVHA
HHCCCHHHHCCCCCCCCCCHHCCCHHHHHHHHCHHHHHCCCCCCCCCCHHHCCCCCEEEC
NPDTHAGVTDRVTTRHDAYLRPFGAAIDAGVPIVMMSTAYYEHLDPRNPAAFSPFVVGTM
CCCCCCCCCCCCCCCCCHHHCCCCHHHHCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHH
LRGDLGFRGVVISDDLARARQVAGFSPAGRALRFIGAGGDIVLSVDADPVGEMYRAVLER
HHCCCCCCEEEECHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHH
ARTSERFRAKVDAAVLRVLRAKQDRHLL
HHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSSPRPVLVAVAAAALGAGLLAPASGSAHAPAVSGRHQETRTAASVYREMSLAQRVGQL
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCE
FMVGTPADRVDRRTRAQIHRFHVGNVMLTGRSYDGVRAPARVSRAMRGEVDGRSTAGVRL
EEECCCHHHHHHHHHHHHHHEEECCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEE
FVATDQEGGQVRVLQGPGFSDIPSALEQGTWQPRRLRGAAKLWAGQLRRAGVNLDLAPVM
EEEECCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
DTVPSRRAARHNPPIGRYDREFGFTTKVVARHGVAFLNGMADGGVVPTAKHFPGLGRVHA
HHCCCHHHHCCCCCCCCCCHHCCCHHHHHHHHCHHHHHCCCCCCCCCCHHHCCCCCEEEC
NPDTHAGVTDRVTTRHDAYLRPFGAAIDAGVPIVMMSTAYYEHLDPRNPAAFSPFVVGTM
CCCCCCCCCCCCCCCCCHHHCCCCHHHHCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHH
LRGDLGFRGVVISDDLARARQVAGFSPAGRALRFIGAGGDIVLSVDADPVGEMYRAVLER
HHCCCCCCEEEECHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHH
ARTSERFRAKVDAAVLRVLRAKQDRHLL
HHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA