| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is yqjG [H]
Identifier: 119718731
GI number: 119718731
Start: 4772384
End: 4773358
Strand: Reverse
Name: yqjG [H]
Synonym: Noca_4512
Alternate gene names: 119718731
Gene position: 4773358-4772384 (Counterclockwise)
Preceding gene: 119718732
Following gene: 119718729
Centisome position: 95.74
GC content: 69.74
Gene sequence:
>975_bases ATGGGCGACGACTCGCGCACCGGCAGGGGCAGGTACCTCACGTCCGGCGACTTCGACCGGGACATGACCTACATCCCCGA CCGGATCACCAAGGACGGGCGCCGGCCCGAGCACGGCCCCGTGCAGGGCGGGCTGTGGCCGGTCGAGCCGGGGCGCTACC GGCTGGTGGCGGCCAAGGCCTGCCCGTGGGCGACCCGGTCGATCATCGTGCGCCAGCTGCTGGGGCTCGAGGACGTGATC TCGATGGGTCTGTGCGGGCCGACCCACGACGAGCGCAGCTGGACCTTCGATCTCGACCCCGGCGGCCGCGACCCGGTGCT CGGCATCGAGCGGCTCCAGGAGGCCTACTTCGCGCGCTACCCCGACTACCCGCGCGGCATCACCGTGCCCGCCGTCGTGG ACGTGCCGACGGGTGCGGTCGTCACCAACGACTTCCCCTGGATCACCCACGACCTGTTCTTCGAGTGGCGCGACCACCAC CGCCCGGACGCACCCGACCTGTGGCCCGACGACCTCCGCGAGGAGATGGACCAGGTGATGCAGCGGATCTTCACCGAGGT CAACAACGGCGTGTACCGGTGCGGGTTCGCCGGCACCCAGGAGGCCTACGATGCGGCCTACGATCGGCTGTGGACGGCGC TGGACTGGCTCGAGGAGCGACTCGCGGACCGGCGCTACCTGATGGGCGACCGGCTCACCGAGGCCGACGTACGCCTGTTC ACCACGCTGGCCCGCTTCGACGCCGTCTATCACGGGCACTTCAAGTGCAACCGCAACAAGCTCGCCGAGATGCCGGTCCT GTGGGCCTACGCCCGCGACCTCTACCAGACCCCCGCGTTCGGCGAGAACACCGACTTCGACCAGATCAAGGCGCACTACT ACGTGGTGCACGAGGACATCAATCCGTCGAAGGTCGTGCCGAAGGGCCCGGATCCGTCGGTCTGGCTGACCCCCCACGGC CGCGACCGGCTCTGA
Upstream 100 bases:
>100_bases CGGCGGTGCTGCGGGTGCTGCGCGCCAAGCAGGACCGGCACCTGCTGTGAGCGGGCCGCGCGCGTCCACCCGTAGTTGAA GGCTCACCTAAGGTGGAGGG
Downstream 100 bases:
>100_bases GGTAGCGCCGGCGGCGGTTTCCCCGGTTCACCGGGGAAGTTGGAACTGTTGGACCGAAGTTTCGGCCGGGAAGTTCCGGT TTCCCCGGTTCACCGGGGAA
Product: putative glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MGDDSRTGRGRYLTSGDFDRDMTYIPDRITKDGRRPEHGPVQGGLWPVEPGRYRLVAAKACPWATRSIIVRQLLGLEDVI SMGLCGPTHDERSWTFDLDPGGRDPVLGIERLQEAYFARYPDYPRGITVPAVVDVPTGAVVTNDFPWITHDLFFEWRDHH RPDAPDLWPDDLREEMDQVMQRIFTEVNNGVYRCGFAGTQEAYDAAYDRLWTALDWLEERLADRRYLMGDRLTEADVRLF TTLARFDAVYHGHFKCNRNKLAEMPVLWAYARDLYQTPAFGENTDFDQIKAHYYVVHEDINPSKVVPKGPDPSVWLTPHG RDRL
Sequences:
>Translated_324_residues MGDDSRTGRGRYLTSGDFDRDMTYIPDRITKDGRRPEHGPVQGGLWPVEPGRYRLVAAKACPWATRSIIVRQLLGLEDVI SMGLCGPTHDERSWTFDLDPGGRDPVLGIERLQEAYFARYPDYPRGITVPAVVDVPTGAVVTNDFPWITHDLFFEWRDHH RPDAPDLWPDDLREEMDQVMQRIFTEVNNGVYRCGFAGTQEAYDAAYDRLWTALDWLEERLADRRYLMGDRLTEADVRLF TTLARFDAVYHGHFKCNRNKLAEMPVLWAYARDLYQTPAFGENTDFDQIKAHYYVVHEDINPSKVVPKGPDPSVWLTPHG RDRL >Mature_323_residues GDDSRTGRGRYLTSGDFDRDMTYIPDRITKDGRRPEHGPVQGGLWPVEPGRYRLVAAKACPWATRSIIVRQLLGLEDVIS MGLCGPTHDERSWTFDLDPGGRDPVLGIERLQEAYFARYPDYPRGITVPAVVDVPTGAVVTNDFPWITHDLFFEWRDHHR PDAPDLWPDDLREEMDQVMQRIFTEVNNGVYRCGFAGTQEAYDAAYDRLWTALDWLEERLADRRYLMGDRLTEADVRLFT TLARFDAVYHGHFKCNRNKLAEMPVLWAYARDLYQTPAFGENTDFDQIKAHYYVVHEDINPSKVVPKGPDPSVWLTPHGR DRL
Specific function: Unknown
COG id: COG0435
COG function: function code O; Predicted glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1789489, Length=311, Percent_Identity=38.5852090032154, Blast_Score=204, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6322929, Length=369, Percent_Identity=30.6233062330623, Blast_Score=157, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6323906, Length=328, Percent_Identity=29.2682926829268, Blast_Score=135, Evalue=7e-33, Organism=Saccharomyces cerevisiae, GI6321593, Length=335, Percent_Identity=28.3582089552239, Blast_Score=125, Evalue=6e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR016639 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C [H]
EC number: NA
Molecular weight: Translated: 37376; Mature: 37245
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDDSRTGRGRYLTSGDFDRDMTYIPDRITKDGRRPEHGPVQGGLWPVEPGRYRLVAAKA CCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECC CPWATRSIIVRQLLGLEDVISMGLCGPTHDERSWTFDLDPGGRDPVLGIERLQEAYFARY CCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC PDYPRGITVPAVVDVPTGAVVTNDFPWITHDLFFEWRDHHRPDAPDLWPDDLREEMDQVM CCCCCCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH QRIFTEVNNGVYRCGFAGTQEAYDAAYDRLWTALDWLEERLADRRYLMGDRLTEADVRLF HHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TTLARFDAVYHGHFKCNRNKLAEMPVLWAYARDLYQTPAFGENTDFDQIKAHYYVVHEDI HHHHHHHHHHCCCEEECCCHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEEEECCC NPSKVVPKGPDPSVWLTPHGRDRL CCCCCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure GDDSRTGRGRYLTSGDFDRDMTYIPDRITKDGRRPEHGPVQGGLWPVEPGRYRLVAAKA CCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECC CPWATRSIIVRQLLGLEDVISMGLCGPTHDERSWTFDLDPGGRDPVLGIERLQEAYFARY CCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC PDYPRGITVPAVVDVPTGAVVTNDFPWITHDLFFEWRDHHRPDAPDLWPDDLREEMDQVM CCCCCCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH QRIFTEVNNGVYRCGFAGTQEAYDAAYDRLWTALDWLEERLADRRYLMGDRLTEADVRLF HHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TTLARFDAVYHGHFKCNRNKLAEMPVLWAYARDLYQTPAFGENTDFDQIKAHYYVVHEDI HHHHHHHHHHCCCEEECCCHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEEEECCC NPSKVVPKGPDPSVWLTPHGRDRL CCCCCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]