| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is glcK [H]
Identifier: 119718704
GI number: 119718704
Start: 4741802
End: 4742719
Strand: Reverse
Name: glcK [H]
Synonym: Noca_4485
Alternate gene names: 119718704
Gene position: 4742719-4741802 (Counterclockwise)
Preceding gene: 119718705
Following gene: 119718703
Centisome position: 95.12
GC content: 77.56
Gene sequence:
>918_bases GTGAGCACCGGGCCGAGCAACGGGTTGAGCGTGGGCCTGGACATCGGCGCGACCAAGACCCTCGGTCTGGTCGTCGACGA GGACGGCGGCATCCGCGCGACCGTGCGGGAGGCGACCGAGCCGGGTGCCGAGGGCGTCGTACGGACGGCCGCCCGGGTGG TTGAGGCGCTCCGCGCCGCGACCGGCGAGCGGCTCGCGGGCACCGTCGGGGTCGGCATGCCCGGCCTGGTCGACGTCGAG CGCGGCGCGGTCAAGCACGCGGTCAACCTCGGCGTGAACGGGGACTGGCTGCCACTCGGCGACCTGCTCGGTGACCGGCT CGGGACACCTGTCGTGGTCGAGAACGACGTCAACGTCGCCAGCCTCGGCGCGGTCGCGATGAGCGGCGAGGACGACCTCG TCTACCTCAGCATCGGCACCGGCCTGGCCGCCGGACTCGTGCTCGCGGGCCGGCTGCGGCGCGGCGACCACGGCGCGGCG GGCGAGATCGGGCACGTGCCCGTGGATCCGGCCGGAGCGCTGTGCCAGTGCGGCCAGCGCGGCTGCCTGGAGACCATCGC CTCGGGGTCGGCGCTGGCCGCGGCCTGGCCCTCGGAGGACGTCCCCCCGGCCCAGGCGCTGTTCGCCGCGGCGCACGCCA GTGACCCCGACGCCATCGCGGCGCGGGACCGGTTCGCCGCGGGTGTCGCCAGCGCCGTCCGGGTGCTCGGCCTGGCCGTC GACCCGCGCACCGTCGTGCTCGGCGGCGGCGTCGCCCAGCTCGGCGAGCCGCTGCGCGCGGCCGTGGCCGACGCCCTGCG CGAGCAGGCCCGGACCTCGCCGTTCCTGGCCTCCCTCGACCTGGCCGGCCGGCTCCGGGTCGTGCCCGCGCACTACCCCG TGGCCGCGGTCGGGGCCGCCCTGCTCGGGCGGTCGTGA
Upstream 100 bases:
>100_bases GTCCGTACGCCGGGGGGACGCCCCGGATCTGCACGCGCGGCTACTCCCGTCCGGGAGCCGTCGCGGTCACCGAGCTGTTG AGGAAGGCGGGGTGGGACCG
Downstream 100 bases:
>100_bases TGAGCATCGTCGTCCCCGGCCTCGTCGACGCCCAGGTCAACGGCGCCGCCGGCATCGACCTCACCACGGAGCCGCACCGG CTGTGGGAGGTGGCGGCCGC
Product: ROK family protein
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSTGPSNGLSVGLDIGATKTLGLVVDEDGGIRATVREATEPGAEGVVRTAARVVEALRAATGERLAGTVGVGMPGLVDVE RGAVKHAVNLGVNGDWLPLGDLLGDRLGTPVVVENDVNVASLGAVAMSGEDDLVYLSIGTGLAAGLVLAGRLRRGDHGAA GEIGHVPVDPAGALCQCGQRGCLETIASGSALAAAWPSEDVPPAQALFAAAHASDPDAIAARDRFAAGVASAVRVLGLAV DPRTVVLGGGVAQLGEPLRAAVADALREQARTSPFLASLDLAGRLRVVPAHYPVAAVGAALLGRS
Sequences:
>Translated_305_residues MSTGPSNGLSVGLDIGATKTLGLVVDEDGGIRATVREATEPGAEGVVRTAARVVEALRAATGERLAGTVGVGMPGLVDVE RGAVKHAVNLGVNGDWLPLGDLLGDRLGTPVVVENDVNVASLGAVAMSGEDDLVYLSIGTGLAAGLVLAGRLRRGDHGAA GEIGHVPVDPAGALCQCGQRGCLETIASGSALAAAWPSEDVPPAQALFAAAHASDPDAIAARDRFAAGVASAVRVLGLAV DPRTVVLGGGVAQLGEPLRAAVADALREQARTSPFLASLDLAGRLRVVPAHYPVAAVGAALLGRS >Mature_304_residues STGPSNGLSVGLDIGATKTLGLVVDEDGGIRATVREATEPGAEGVVRTAARVVEALRAATGERLAGTVGVGMPGLVDVER GAVKHAVNLGVNGDWLPLGDLLGDRLGTPVVVENDVNVASLGAVAMSGEDDLVYLSIGTGLAAGLVLAGRLRRGDHGAAG EIGHVPVDPAGALCQCGQRGCLETIASGSALAAAWPSEDVPPAQALFAAAHASDPDAIAARDRFAAGVASAVRVLGLAVD PRTVVLGGGVAQLGEPLRAAVADALREQARTSPFLASLDLAGRLRVVPAHYPVAAVGAALLGRS
Specific function: Unknown
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Escherichia coli, GI87081733, Length=261, Percent_Identity=30.6513409961686, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1787878, Length=222, Percent_Identity=29.2792792792793, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1790522, Length=250, Percent_Identity=30.4, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787363, Length=266, Percent_Identity=29.6992481203008, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786891, Length=251, Percent_Identity=26.6932270916335, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87082127, Length=170, Percent_Identity=30.5882352941176, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI87082230, Length=294, Percent_Identity=30.6122448979592, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 30344; Mature: 30213
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGPSNGLSVGLDIGATKTLGLVVDEDGGIRATVREATEPGAEGVVRTAARVVEALRAA CCCCCCCCCEEEEECCCCEEEEEEEECCCCEEEEEHHCCCCCHHHHHHHHHHHHHHHHHH TGERLAGTVGVGMPGLVDVERGAVKHAVNLGVNGDWLPLGDLLGDRLGTPVVVENDVNVA CCCHHEEEECCCCCCCEECHHHHHHHHEECCCCCCCEEHHHHHHHHCCCCEEEECCCCEE SLGAVAMSGEDDLVYLSIGTGLAAGLVLAGRLRRGDHGAAGEIGHVPVDPAGALCQCGQR HHCEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCH GCLETIASGSALAAAWPSEDVPPAQALFAAAHASDPDAIAARDRFAAGVASAVRVLGLAV HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEC DPRTVVLGGGVAQLGEPLRAAVADALREQARTSPFLASLDLAGRLRVVPAHYPVAAVGAA CCCEEEEECCHHHHCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCHHHHHHH LLGRS HHCCC >Mature Secondary Structure STGPSNGLSVGLDIGATKTLGLVVDEDGGIRATVREATEPGAEGVVRTAARVVEALRAA CCCCCCCCEEEEECCCCEEEEEEEECCCCEEEEEHHCCCCCHHHHHHHHHHHHHHHHHH TGERLAGTVGVGMPGLVDVERGAVKHAVNLGVNGDWLPLGDLLGDRLGTPVVVENDVNVA CCCHHEEEECCCCCCCEECHHHHHHHHEECCCCCCCEEHHHHHHHHCCCCEEEECCCCEE SLGAVAMSGEDDLVYLSIGTGLAAGLVLAGRLRRGDHGAAGEIGHVPVDPAGALCQCGQR HHCEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCH GCLETIASGSALAAAWPSEDVPPAQALFAAAHASDPDAIAARDRFAAGVASAVRVLGLAV HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEC DPRTVVLGGGVAQLGEPLRAAVADALREQARTSPFLASLDLAGRLRVVPAHYPVAAVGAA CCCEEEEECCHHHHCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCHHHHHHH LLGRS HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]