Click here to switch to the map view.

The map label for this gene is hcr [C]

Identifier: 119718700

GI number: 119718700

Start: 4737601

End: 4738755

Strand: Reverse

Name: hcr [C]

Synonym: Noca_4481

Alternate gene names: 119718700

Gene position: 4738755-4737601 (Counterclockwise)

Preceding gene: 119718702

Following gene: 119718699

Centisome position: 95.04

GC content: 73.16

Gene sequence:

>1155_bases
ATGATCTTACGCCCGAGAGCCAGCACACTCGAAGGCATGAGCGTCGCCATCCCCTCGGCTGCGTCCCGGTCCGGGTCGGG
ATGGTCCCTGCGCAGCACGCTGCGCCAGGTCGCCCAGGCGGCCGTGACCCCGCGCGACCTCGACGACGTCCTCGACCACT
TCCACCCGCTGCGGCGCGGCACCGACCTGCGCGGCCGGATCGTCGAGGTCCGGCCCGAGACCGCGGCCTCCGCCACGGTG
GTGATCAAGCCGGGGCGCGACTGGACCGGACACGTGCCGGGGCAGTACCTCCGCGTGGGCGTCGACGTCGACGGCGTGCG
CCTGTGGCGCACCTACTCGCTGACCCACGGGCCCCGGGCCGACCGGTGCATCAGCATCACGGTCAAGGCGATCCCCGGAG
GCGTCGTCTCCAACCACCTGGTGCACCGGATCCGCCCCGGCCAGATGATCCAGATCGGCCAGGCCGAGGGCGAGTTCGTG
CTGACCCAACCGATCCCCGACAAGCTGCTGCTGGTCACCGCCGGCTCCGGCATCACGCCGGTGATCGGGATGCTGCGCAA
CCTGTTCTCCCGCGCGGTGCGGCCCACCACCGACATCGTGCTGCTGCACTCGGCGCTGTCGCGCTCGGAGGTGATCTTCG
GCGAGGAGCTGCGCCGGTACGGCGCGGCCGGCTGGCTGCGCCTGGTCGAGCTGCACACCGACACCCACGGGCTGCTCCAG
GTCGGCGACCCCGAAGCCGGCTTGGACCGGATCGTCCCCGACCTGGCCGAGCGGACGGCGTACGCCTGCGGGCCCGCGGG
CCTGCTCGACGCGCTGCAGGAGCACTACGACGCGCGCGGCCTCGAGCTCAACGTCGAGCGGTTCCGCGCGCCGATGGTCG
CCACCGGAGAAGGCGGCACCCTGACCTTTACCTCCGGCGTCGCCGTCGCGGCCGACGGGGCGACGCCGATCCTGGACGCC
GCCGAGTCCGCCGGCGTGCTGATGCCGAGCGGCTGCCGGATGGGCGTCTGCTTCGGCTGCGTCCTGCCGCTGCGCGAGGG
CGCGGTCCGCGACCTGCGCAACGGCCAGCTCACCACCGCCGCCCCCGGGGACGGCGTGATCATCCAGACCTGCATCAACG
CCGTCGCCGGCGAGTGCCACCTCGACCACGCCTGA

Upstream 100 bases:

>100_bases
CGGCGGTGTGGCGAACCGGGCGACGGACCATGGCGCCTCCAAGGTGAACGAAATTGTGCACAGATAACAAATCGGACGCA
GATCTTCACGTCCCGGAGTC

Downstream 100 bases:

>100_bases
CCACGATCCGAGGAGACCCACGTGACCGCGATCCAGAAGAAGCCCGTCAGCCCCGTCGCCCACCTGACCCCCGAGGATGT
CGAGCAGATCGGCATCGAGC

Product: oxidoreductase FAD-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MILRPRASTLEGMSVAIPSAASRSGSGWSLRSTLRQVAQAAVTPRDLDDVLDHFHPLRRGTDLRGRIVEVRPETAASATV
VIKPGRDWTGHVPGQYLRVGVDVDGVRLWRTYSLTHGPRADRCISITVKAIPGGVVSNHLVHRIRPGQMIQIGQAEGEFV
LTQPIPDKLLLVTAGSGITPVIGMLRNLFSRAVRPTTDIVLLHSALSRSEVIFGEELRRYGAAGWLRLVELHTDTHGLLQ
VGDPEAGLDRIVPDLAERTAYACGPAGLLDALQEHYDARGLELNVERFRAPMVATGEGGTLTFTSGVAVAADGATPILDA
AESAGVLMPSGCRMGVCFGCVLPLREGAVRDLRNGQLTTAAPGDGVIIQTCINAVAGECHLDHA

Sequences:

>Translated_384_residues
MILRPRASTLEGMSVAIPSAASRSGSGWSLRSTLRQVAQAAVTPRDLDDVLDHFHPLRRGTDLRGRIVEVRPETAASATV
VIKPGRDWTGHVPGQYLRVGVDVDGVRLWRTYSLTHGPRADRCISITVKAIPGGVVSNHLVHRIRPGQMIQIGQAEGEFV
LTQPIPDKLLLVTAGSGITPVIGMLRNLFSRAVRPTTDIVLLHSALSRSEVIFGEELRRYGAAGWLRLVELHTDTHGLLQ
VGDPEAGLDRIVPDLAERTAYACGPAGLLDALQEHYDARGLELNVERFRAPMVATGEGGTLTFTSGVAVAADGATPILDA
AESAGVLMPSGCRMGVCFGCVLPLREGAVRDLRNGQLTTAAPGDGVIIQTCINAVAGECHLDHA
>Mature_384_residues
MILRPRASTLEGMSVAIPSAASRSGSGWSLRSTLRQVAQAAVTPRDLDDVLDHFHPLRRGTDLRGRIVEVRPETAASATV
VIKPGRDWTGHVPGQYLRVGVDVDGVRLWRTYSLTHGPRADRCISITVKAIPGGVVSNHLVHRIRPGQMIQIGQAEGEFV
LTQPIPDKLLLVTAGSGITPVIGMLRNLFSRAVRPTTDIVLLHSALSRSEVIFGEELRRYGAAGWLRLVELHTDTHGLLQ
VGDPEAGLDRIVPDLAERTAYACGPAGLLDALQEHYDARGLELNVERFRAPMVATGEGGTLTFTSGVAVAADGATPILDA
AESAGVLMPSGCRMGVCFGCVLPLREGAVRDLRNGQLTTAAPGDGVIIQTCINAVAGECHLDHA

Specific function: This is an electron transfer partner for desA3 [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787098, Length=298, Percent_Identity=30.8724832214765, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40914; Mature: 40914

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILRPRASTLEGMSVAIPSAASRSGSGWSLRSTLRQVAQAAVTPRDLDDVLDHFHPLRRG
CCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
TDLRGRIVEVRPETAASATVVIKPGRDWTGHVPGQYLRVGVDVDGVRLWRTYSLTHGPRA
CCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCC
DRCISITVKAIPGGVVSNHLVHRIRPGQMIQIGQAEGEFVLTQPIPDKLLLVTAGSGITP
CCEEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCEEEEEECCCCHHH
VIGMLRNLFSRAVRPTTDIVLLHSALSRSEVIFGEELRRYGAAGWLRLVELHTDTHGLLQ
HHHHHHHHHHHHCCCCHHHEEEHHHHCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEE
VGDPEAGLDRIVPDLAERTAYACGPAGLLDALQEHYDARGLELNVERFRAPMVATGEGGT
ECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHHHCCCEEEECCCCE
LTFTSGVAVAADGATPILDAAESAGVLMPSGCRMGVCFGCVLPLREGAVRDLRNGQLTTA
EEEECCEEEEECCCCHHHHHHHHCCEECCCCCCHHHHHHHHHHHHCCHHHHHCCCEEEEE
APGDGVIIQTCINAVAGECHLDHA
CCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MILRPRASTLEGMSVAIPSAASRSGSGWSLRSTLRQVAQAAVTPRDLDDVLDHFHPLRRG
CCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
TDLRGRIVEVRPETAASATVVIKPGRDWTGHVPGQYLRVGVDVDGVRLWRTYSLTHGPRA
CCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCC
DRCISITVKAIPGGVVSNHLVHRIRPGQMIQIGQAEGEFVLTQPIPDKLLLVTAGSGITP
CCEEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCEEEEEECCCCHHH
VIGMLRNLFSRAVRPTTDIVLLHSALSRSEVIFGEELRRYGAAGWLRLVELHTDTHGLLQ
HHHHHHHHHHHHCCCCHHHEEEHHHHCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEE
VGDPEAGLDRIVPDLAERTAYACGPAGLLDALQEHYDARGLELNVERFRAPMVATGEGGT
ECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHHHCCCEEEECCCCE
LTFTSGVAVAADGATPILDAAESAGVLMPSGCRMGVCFGCVLPLREGAVRDLRNGQLTTA
EEEECCEEEEECCCCHHHHHHHHCCEECCCCCCHHHHHHHHHHHHCCHHHHHCCCEEEEE
APGDGVIIQTCINAVAGECHLDHA
CCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]