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The map label for this gene is whiG [H]

Identifier: 119718669

GI number: 119718669

Start: 4704273

End: 4705175

Strand: Reverse

Name: whiG [H]

Synonym: Noca_4450

Alternate gene names: 119718669

Gene position: 4705175-4704273 (Counterclockwise)

Preceding gene: 119718670

Following gene: 119718662

Centisome position: 94.37

GC content: 74.75

Gene sequence:

>903_bases
GTGAACTCGGGCCGTTCCACCCTTCTGACGACCGCGGAGCGCGACCAGCTCGCCGTCGAGCACGTGCCGCTGGTGGCGCA
CCTGGTGCGCGAGACGATGGCGCGGGTGCCGTCGTACATGGACCGCAACGACCTGCACTCCGCAGGCCTCCTCGCGCTCG
TCCAGGCCGCCCGCGCCTTCGACCCCGAGCGCGGGGTGCCGTTCGCGGGCTATGCGAGCACTCGGATCCGCGGCGCCCTG
GTCGACGAGCTGCGCTCGGTGGACTGGGCCTCGCGCTCGGTACGTCGTCGAGCCCGGGAGATCGAGGCGGCACGGGCCCG
CCTGGCCGCGACCTTGGGTCAGTTCCCCGACGACGCCGCGGTCGCCGAGGCCCTGGGCATCACCCCGGAGGAGATCGGCA
AGGCCGACTCCGAGGTGGCCCGGGCCGTGGTGCTGCCGCTCGACGCGGGCCCGAACGCGGGGTTCGTCGAGAGCCTGGCC
GGTCGCGACCCCGGCCCCGAGGAGGAGGCGCTGCGCGCCGAGCGCGCGCAGTACCTCGCGGCCGCCGTGGAGGAGCTCCC
CGAGCGGCTGCGCCACGTGGTGCGCGGCTACTTCATCGCGCAGCGGCCGATGGCCGAGCTGGCCGCCGAACTCGGGGTCA
GCAAGTCGCGCATCTCCCGGTTGCAGACGGAGGCGCTGGCGCTCCTGCGCGACGCCCTCGCCGAGGCCTTCGACCCGCAC
CTGGCCACGCCGCACCCGAACCCCGACGGTGTCGCGGCTCGGCGCCGGCTCGCCTACACCAGCGCCGTCGCCGCCCGGTA
CGCCGCCCGCGGATTGCACCAGCTGAGCGCGCCCCACGGGGAGTTGGCGCTATCGGCAGCGTCGGAGGCGTGCCGTGTCC
AACTCGTTGCTGGTGACGGATGA

Upstream 100 bases:

>100_bases
GGAAGACGACTTCTACCGAGTGGGTGGTCTCCCGGGCTATTCCCGGGCGCGTCCCGCGGGTATTGCGTCATGACCGGTCC
GGATATGTGTCACTACTCGC

Downstream 100 bases:

>100_bases
CGGGACTGAACTGACACAGGAGGACGAAGCTCGCCTGGTGCTGCGTCCCTGAAATGTCAGCTGGGACCCCGACTGCGTCG
AGGTCCCAGTTCAACATCCG

Product: sigma-70 region 4 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MNSGRSTLLTTAERDQLAVEHVPLVAHLVRETMARVPSYMDRNDLHSAGLLALVQAARAFDPERGVPFAGYASTRIRGAL
VDELRSVDWASRSVRRRAREIEAARARLAATLGQFPDDAAVAEALGITPEEIGKADSEVARAVVLPLDAGPNAGFVESLA
GRDPGPEEEALRAERAQYLAAAVEELPERLRHVVRGYFIAQRPMAELAAELGVSKSRISRLQTEALALLRDALAEAFDPH
LATPHPNPDGVAARRRLAYTSAVAARYAARGLHQLSAPHGELALSAASEACRVQLVAGDG

Sequences:

>Translated_300_residues
MNSGRSTLLTTAERDQLAVEHVPLVAHLVRETMARVPSYMDRNDLHSAGLLALVQAARAFDPERGVPFAGYASTRIRGAL
VDELRSVDWASRSVRRRAREIEAARARLAATLGQFPDDAAVAEALGITPEEIGKADSEVARAVVLPLDAGPNAGFVESLA
GRDPGPEEEALRAERAQYLAAAVEELPERLRHVVRGYFIAQRPMAELAAELGVSKSRISRLQTEALALLRDALAEAFDPH
LATPHPNPDGVAARRRLAYTSAVAARYAARGLHQLSAPHGELALSAASEACRVQLVAGDG
>Mature_300_residues
MNSGRSTLLTTAERDQLAVEHVPLVAHLVRETMARVPSYMDRNDLHSAGLLALVQAARAFDPERGVPFAGYASTRIRGAL
VDELRSVDWASRSVRRRAREIEAARARLAATLGQFPDDAAVAEALGITPEEIGKADSEVARAVVLPLDAGPNAGFVESLA
GRDPGPEEEALRAERAQYLAAAVEELPERLRHVVRGYFIAQRPMAELAAELGVSKSRISRLQTEALALLRDALAEAFDPH
LATPHPNPDGVAARRRLAYTSAVAARYAARGLHQLSAPHGELALSAASEACRVQLVAGDG

Specific function: The level of this sigma factor may be crucial in determining the developmental fate of hyphae [H]

COG id: COG1191

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma-70 factor family [H]

Homologues:

Organism=Escherichia coli, GI1788231, Length=244, Percent_Identity=34.0163934426229, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014284
- InterPro:   IPR000943
- InterPro:   IPR007627
- InterPro:   IPR007624
- InterPro:   IPR007630
- InterPro:   IPR012845
- InterPro:   IPR013325
- InterPro:   IPR013324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF04539 Sigma70_r3; PF04545 Sigma70_r4 [H]

EC number: NA

Molecular weight: Translated: 32134; Mature: 32134

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSGRSTLLTTAERDQLAVEHVPLVAHLVRETMARVPSYMDRNDLHSAGLLALVQAARAF
CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
DPERGVPFAGYASTRIRGALVDELRSVDWASRSVRRRAREIEAARARLAATLGQFPDDAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VAEALGITPEEIGKADSEVARAVVLPLDAGPNAGFVESLAGRDPGPEEEALRAERAQYLA
HHHHHCCCHHHHCCCHHHHHHHHEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
AAVEELPERLRHVVRGYFIAQRPMAELAAELGVSKSRISRLQTEALALLRDALAEAFDPH
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
LATPHPNPDGVAARRRLAYTSAVAARYAARGLHQLSAPHGELALSAASEACRVQLVAGDG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCC
>Mature Secondary Structure
MNSGRSTLLTTAERDQLAVEHVPLVAHLVRETMARVPSYMDRNDLHSAGLLALVQAARAF
CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
DPERGVPFAGYASTRIRGALVDELRSVDWASRSVRRRAREIEAARARLAATLGQFPDDAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VAEALGITPEEIGKADSEVARAVVLPLDAGPNAGFVESLAGRDPGPEEEALRAERAQYLA
HHHHHCCCHHHHCCCHHHHHHHHEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
AAVEELPERLRHVVRGYFIAQRPMAELAAELGVSKSRISRLQTEALALLRDALAEAFDPH
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
LATPHPNPDGVAARRRLAYTSAVAARYAARGLHQLSAPHGELALSAASEACRVQLVAGDG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2507166; 12000953 [H]