| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718599
Identifier: 119718599
GI number: 119718599
Start: 4629589
End: 4630443
Strand: Reverse
Name: 119718599
Synonym: Noca_4380
Alternate gene names: NA
Gene position: 4630443-4629589 (Counterclockwise)
Preceding gene: 119718601
Following gene: 119718598
Centisome position: 92.87
GC content: 78.13
Gene sequence:
>855_bases GTGACCGCGACCGCCGCCTCGGACTACCGCTGTGCCGGGGCCAGCCTGCTCGACACCGAGCCGATGGCCGGCACCGCGCC CGCCGACGTTGCGTGGCTGTTCGTCGAGCAGCCCGGCCCGTGGGGCCGCCAGGCGGTCGCCGAGTGCCGGCTGCCCGAGG CCGTTCGTGACCACCTGGCCGGCCTCGACGGCGTACGGGTCCAGCTGATCCGCCGCCCGGGCGGCGCCTCCGGGCCGGGC GTGCGGGTCTTCTCCGCGGTGCTGGGCGACCGGCCGGTCGTGCGCACGGCGCTGCTCGCGGACCCGACCGAGCTGCTCGG CGGTCTCGACGACCTCTCCTGGGAGCCGTACGGCGACCCGCTGTGGCTGGTGTGCACGAACGGGCGGCGCGACCTGTGCT GCGCCGAGCGCGGTCGTCCGGTCGCCGCCGCGCTGGCCGCCCGCTGGCCGGACGCGACCTGGGAGACCAGTCACCTGGGC GGGCACCGGTTCTCCGGGACCCTGCTCGCGCTCCCGGCGGGCGTGGTGCTCGGCCGGCTCGACCCGGGGTCCGCCGTCGC GGCCTGTGCGGCCCTGGAGGCCGGCCGGCTGCCCGCCCACCTGGCCCGCGGCCGCTCCGGCCTGCCGGGGATCGCCCAGG TGGCCGAGCTGTACCTGCGCGCCGAGCTGGGGCTCCACCGGCTCGACGACATCCGCGTGGTGGGGGTGGAGGACGGGCGG GTGCGCCTGGAGGCCGGCGGCGCGGCGTACCTGGTCGAGGTCGAGGAGTCGCTCGGCGCCCCGCGCCGGCACAGCTGCGC GGACCTTCGGACGAAGGCCGCGCCCGTGTACACGGTCGTCGGCTGGGGTACCTGA
Upstream 100 bases:
>100_bases GAGCCGGCCGGCGTGTGCTCGATCACGCACGGCCCGCCGGGCCCGTCCGGCGAGGGGGCGGATCGGCTCACCGCCCACCG CACAGCCATACTCGGGACCC
Downstream 100 bases:
>100_bases TCGGGAGATCGACGATCCCGTTCCCGACCGACCCAGGAGGACGTCATGACCACCACGCCCGAAGAGCCTCTCAACGACGA CGACATGACCACCGCCCCGG
Product: sucraseferredoxin family protein
Products: NA
Alternate protein names: Sucrase; Sucrase Ferredoxin Family Protein
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTATAASDYRCAGASLLDTEPMAGTAPADVAWLFVEQPGPWGRQAVAECRLPEAVRDHLAGLDGVRVQLIRRPGGASGPG VRVFSAVLGDRPVVRTALLADPTELLGGLDDLSWEPYGDPLWLVCTNGRRDLCCAERGRPVAAALAARWPDATWETSHLG GHRFSGTLLALPAGVVLGRLDPGSAVAACAALEAGRLPAHLARGRSGLPGIAQVAELYLRAELGLHRLDDIRVVGVEDGR VRLEAGGAAYLVEVEESLGAPRRHSCADLRTKAAPVYTVVGWGT
Sequences:
>Translated_284_residues MTATAASDYRCAGASLLDTEPMAGTAPADVAWLFVEQPGPWGRQAVAECRLPEAVRDHLAGLDGVRVQLIRRPGGASGPG VRVFSAVLGDRPVVRTALLADPTELLGGLDDLSWEPYGDPLWLVCTNGRRDLCCAERGRPVAAALAARWPDATWETSHLG GHRFSGTLLALPAGVVLGRLDPGSAVAACAALEAGRLPAHLARGRSGLPGIAQVAELYLRAELGLHRLDDIRVVGVEDGR VRLEAGGAAYLVEVEESLGAPRRHSCADLRTKAAPVYTVVGWGT >Mature_283_residues TATAASDYRCAGASLLDTEPMAGTAPADVAWLFVEQPGPWGRQAVAECRLPEAVRDHLAGLDGVRVQLIRRPGGASGPGV RVFSAVLGDRPVVRTALLADPTELLGGLDDLSWEPYGDPLWLVCTNGRRDLCCAERGRPVAAALAARWPDATWETSHLGG HRFSGTLLALPAGVVLGRLDPGSAVAACAALEAGRLPAHLARGRSGLPGIAQVAELYLRAELGLHRLDDIRVVGVEDGRV RLEAGGAAYLVEVEESLGAPRRHSCADLRTKAAPVYTVVGWGT
Specific function: Unknown
COG id: COG4759
COG function: function code O; Uncharacterized protein conserved in bacteria containing thioredoxin-like domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29825; Mature: 29694
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATAASDYRCAGASLLDTEPMAGTAPADVAWLFVEQPGPWGRQAVAECRLPEAVRDHLA CCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHC GLDGVRVQLIRRPGGASGPGVRVFSAVLGDRPVVRTALLADPTELLGGLDDLSWEPYGDP CCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCC LWLVCTNGRRDLCCAERGRPVAAALAARWPDATWETSHLGGHRFSGTLLALPAGVVLGRL EEEEEECCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECC DPGSAVAACAALEAGRLPAHLARGRSGLPGIAQVAELYLRAELGLHRLDDIRVVGVEDGR CCCHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCEEEEEECCCE VRLEAGGAAYLVEVEESLGAPRRHSCADLRTKAAPVYTVVGWGT EEEEECCEEEEEEEHHHHCCCCCCCHHHHHHCCCCEEEEEECCC >Mature Secondary Structure TATAASDYRCAGASLLDTEPMAGTAPADVAWLFVEQPGPWGRQAVAECRLPEAVRDHLA CCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHC GLDGVRVQLIRRPGGASGPGVRVFSAVLGDRPVVRTALLADPTELLGGLDDLSWEPYGDP CCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCC LWLVCTNGRRDLCCAERGRPVAAALAARWPDATWETSHLGGHRFSGTLLALPAGVVLGRL EEEEEECCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECC DPGSAVAACAALEAGRLPAHLARGRSGLPGIAQVAELYLRAELGLHRLDDIRVVGVEDGR CCCHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCEEEEEECCCE VRLEAGGAAYLVEVEESLGAPRRHSCADLRTKAAPVYTVVGWGT EEEEECCEEEEEEEHHHHCCCCCCCHHHHHHCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA