| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718539
Identifier: 119718539
GI number: 119718539
Start: 4570118
End: 4570477
Strand: Reverse
Name: 119718539
Synonym: Noca_4320
Alternate gene names: NA
Gene position: 4570477-4570118 (Counterclockwise)
Preceding gene: 119718540
Following gene: 119718538
Centisome position: 91.67
GC content: 78.61
Gene sequence:
>360_bases ATGCCCGCCCGCCTCCGACCGGCGGACCCCGCCGAGGTCGCGGCCGCCCTCGACCGGGTGCGCGGTGGCGAGCCCGACCG CGTCGACCTGCGGCTGCTCACCAAGCACTACCTGGCCGTGCTCGAGGAGCGGGCGCCGGGCCGCTCCGTCGAGGTGCGGG TCCCGCCGTACGCCGCCGTGCAGGTGATCCCCGGCGTCCGGCACACCCGGGGCACGCCGCCCGCCGTCGTCGAGACCGAC GCCGCCACCTGGATCGACCTCGCGACCGGCGCGCTGTCCTGGCCCGACGCCGAGCTGGCCGGACGGGTCCGGGCCAGCGG CGAGCGCGCCGACCTCGCGCCGTACCTCCCGTTGGGATAG
Upstream 100 bases:
>100_bases GGGTGACGTACTCGGTCTACCAGCTCATCCAGCCCTACCCCGAGCTCGGGGAGGCCGGGGCGGCTGGGGAGTCCCGGGAG CCGCCGGAGGACGAGGACTG
Downstream 100 bases:
>100_bases TCCCTGACGATTGCGCTGTCCCGCCCGCGGATCCGCCCCGCAAGCGTCAGGGACTACCGGACTGATTAGGTTGAGACCCA TGACCGACGACATCCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MPARLRPADPAEVAAALDRVRGGEPDRVDLRLLTKHYLAVLEERAPGRSVEVRVPPYAAVQVIPGVRHTRGTPPAVVETD AATWIDLATGALSWPDAELAGRVRASGERADLAPYLPLG
Sequences:
>Translated_119_residues MPARLRPADPAEVAAALDRVRGGEPDRVDLRLLTKHYLAVLEERAPGRSVEVRVPPYAAVQVIPGVRHTRGTPPAVVETD AATWIDLATGALSWPDAELAGRVRASGERADLAPYLPLG >Mature_118_residues PARLRPADPAEVAAALDRVRGGEPDRVDLRLLTKHYLAVLEERAPGRSVEVRVPPYAAVQVIPGVRHTRGTPPAVVETDA ATWIDLATGALSWPDAELAGRVRASGERADLAPYLPLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12734; Mature: 12602
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARLRPADPAEVAAALDRVRGGEPDRVDLRLLTKHYLAVLEERAPGRSVEVRVPPYAAV CCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEE QVIPGVRHTRGTPPAVVETDAATWIDLATGALSWPDAELAGRVRASGERADLAPYLPLG EECCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCHHHHCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PARLRPADPAEVAAALDRVRGGEPDRVDLRLLTKHYLAVLEERAPGRSVEVRVPPYAAV CCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEE QVIPGVRHTRGTPPAVVETDAATWIDLATGALSWPDAELAGRVRASGERADLAPYLPLG EECCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCHHHHCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA