Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119718529

Identifier: 119718529

GI number: 119718529

Start: 4553045

End: 4555807

Strand: Reverse

Name: 119718529

Synonym: Noca_4310

Alternate gene names: NA

Gene position: 4555807-4553045 (Counterclockwise)

Preceding gene: 119718533

Following gene: 119718527

Centisome position: 91.37

GC content: 73.07

Gene sequence:

>2763_bases
GTGTGGATCCCGACAGAGCATGACGCGGAGACCCGCCGGGACCACCGGGAGCGGGCGGGGCGTGGGTCAGGCCTGGTCGG
TGTCGGCGTACTGCTCGGAGTGGGAGTAGTAGCCGAGAGCGGTGCTCAGGCTCTCCAGCGAGCGCCGGGCGGCGAGGGCG
AACTCAGGTGCAGGGTCTCGGTCCAGGTCGTCGTGGCGGATGGCCCCGAGCCCGATGCTCGGTGCGGCGTTCGGCTCGTC
GGCGCGCAGCATCGCGACCGCGGTGACCTCATCCCCGTCGTCGGACAGCTCGATGTCGACGTGCCAGGTGGTGGTCTGCA
TGTCCTGCTTCTCTCCTTGTTCGCAGGGACGCTCCTCGTCCCGATGCGAGTCAACCCGGCTGTGACGGGTGGGACCACGG
ACCACCTTCACCCCTGGGCGGGGACCTTGGTCCCGTTGCGACCGGGCCACGTGACGGCCGCCACCGTCCGTCGTTGTCGA
GGCATGCGCTCGCGTCTCCTGCTGGTCCTCCTCGCCCTCGTGGCCCCGGTCCTGGTCGCCCTCCCGAGCGGGGGCAGCGC
GGCTGCGACCCGCGGCGCGCTGCAGGTGCAGGTGCTCTCGAACCGGGCCGACCTGATCTCGGGTGGGGACGCGCTCGTCG
CCGTGCGCATCCCGGCGGGCGTGGACCCCGGCCGGGTCCGGGTGGTCGTGGACGACCGCGACGTGACGGACCGGTTCGCG
GTCCGCGCCGACGGCCGGTACGTCGGTCTGGTCGACGGCCTCGCGCTCGGCCGCAACGTGCTGCGGGCGACGGTGCCGGG
AGTGAGCGGTGTGGCCGGCGACCACGCGGTGATCGTCGACCACCCGAACGGCGGGCCGGTCTTCTCCGGCCCGCAGACCG
AGCACTACCGCTGCCAGGAGTCCGCGCGCGACGCCCAGTGCAACGAGCCGGCGACCTACGACTACCTCTACAGGTCGACC
GACCCGCTGACCCCCGACCTGCAGCCCTACGACCCCGACAACCCGCCCTCGGACGTCGCCACCACGACCACCGACCAGGG
CGTGGAGGTGCCGTTCGTGGTCCGTCGCGAGCGGGGCTACCAGGACCGTGACCGCTACACGATCCTCACCCTGTTCCAGC
CCGGCCGGCCGTGGCGCGCCTGGTCCCCGCAGGAGCAGTGGAACCACAAGCTGCTGGTCACCCACGGGGGCGGCTGCGGC
GCGTCGTACACCCCCGGGTCCCCGCCGCTCGCCGACTACTCCGGCACCTTCGACGGCGTCCCGCTGGTGACGCCGAGCTA
TGTCACCGCCCTCGGCCGGGGCTTCGCCGTGCTCTCGACCGCCCTGGACAACACCGGCCACAACTGCAGCGTCGCGATGA
ACGCGGAGTCGGTGCTGATGGCCAAGGAGCGGCTGGTCGAGCAGTACGGCGAGCTGCGCTACACGATCGGCACCGGCTGC
TCGGGCGGCTCGATCGCCCAGCACACCGTGGCGAACGCCTACCCCGGGATCTACCAGGGGCTCGTGACGACCTGCTCCTA
CCCGGACACGTTCACCGCCGGCGCCCAGTTCGCCGACTACCACCTGCTGCGGCTCTACTTCGAGGACCCGTCGCGCTGGG
GCCCCGGCGTCGTGTGGACGCCGGTGCAGATGGCGATGGTCGAGGGGCACCTCTCGCACGTCAACGCCGTGGTCGCCGAC
GAGGGCCTGTTCAAGGCGGCGCTGGACCCGGAGCACGCCTGCTCCGGCACCGTCGACCCCCGGCCGGGCGACCCGGCCAC
CCGCTACGACTCCGAGACCAACCCGGGCGGGGTGCGCTGCTCGGTGCTCGACCTGCTGGTCAACCAGCTGGGCCGCCGGC
CCGCCTCGGTCTGGACGCCGCAGGAGCAGGCCGCCGGGCACGGCTTCGGCGGCATCCCGTTCTCGAACACGGGCGTCCTC
TACGGGCTCGCCGAGCTGAAGGCGGGCACCATCACGACCGCCCAGTTCGTGGACCTGAACGCCAAGCTCGGCGGCCTCGA
CGTCGACTCCCAGGCGATCCCGGAGCGGATCGCCGGCGACCCGGCCTCGATCGCGCGCGCCTACCGCACCGGCCTGATCA
ACGAGGCGAACCACCTCGACGAGGTCGCGATGATCAACCACGGCGGGCCGGACCCGGGCATCGCGCACGACTACGCCCAC
GCGTTCTGGACCCAGGAGCGGCTGCAGGCCGACCAGGGGAACACCGACAACCGGGTGATGTGGTTCGGGCCGACGCCGCT
GATCGGCGACGTGCGCTGGGCCGGCGAGGCCCTGCTCGCCATGGACCGGTGGCTCGCCGCCGTCGAGCAGGACCACGGCC
CCGAACCGCTGGCGCAGAAGATCGCCGCCGACCGTCCCGCCGACGTCACCGACCGCTGCGTGGTCGCGGAGGCCGCCGAC
GCGTGCGACGTGCAGGAGCTCCAGGTCCTCCAGACCCGCCTCTCCACCCCACGCCAGGAGGCCGGCGGCCCGCTCGCCAA
CGACGTCGTCGCCTGCCGGCTCACTCCGCTCGACCGCGCCGCCTTCGACTTCCTGCTGGTCCCGTTCACCGACGCCGAGT
GGGCCACCCTCCAGGCGACCTTCCCCGACGGCGTCTGTGACTGGTCCCAGCCCGGCCTCGGCCAGGGCCCCGCCGAGACC
TGGCTGCGCTACGACGCCGCCGACGGCGGCCCGGCGTACGGCGGCCGCAACCTGCCGCCCCCGCCCGCCGACTCCGGCCT
CGGCACCCTCGGCCCGGTGTGGACGGAGATGCTGACCAAGTAG

Upstream 100 bases:

>100_bases
CAGCAGCTCGAACGAGCGCAGGTCGGGACCGGGGTCGCCGACGGCGTCGTCGTACCCGTCCGAGCTCATGGACCGATCAT
CGCCCAGGTGCCGTGGAATT

Downstream 100 bases:

>100_bases
CTGCCCGGGTGGCCCGGGCCGGCCCGATGTGGTCTCGGATGGCCCCCGGGGTCGGCGGTGTGCTGGCAACCGGATCAGAC
CCAGATGGGTTGCCGAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 920; Mature: 920

Protein sequence:

>920_residues
MWIPTEHDAETRRDHRERAGRGSGLVGVGVLLGVGVVAESGAQALQRAPGGEGELRCRVSVQVVVADGPEPDARCGVRLV
GAQHRDRGDLIPVVGQLDVDVPGGGLHVLLLSLFAGTLLVPMRVNPAVTGGTTDHLHPWAGTLVPLRPGHVTAATVRRCR
GMRSRLLLVLLALVAPVLVALPSGGSAAATRGALQVQVLSNRADLISGGDALVAVRIPAGVDPGRVRVVVDDRDVTDRFA
VRADGRYVGLVDGLALGRNVLRATVPGVSGVAGDHAVIVDHPNGGPVFSGPQTEHYRCQESARDAQCNEPATYDYLYRST
DPLTPDLQPYDPDNPPSDVATTTTDQGVEVPFVVRRERGYQDRDRYTILTLFQPGRPWRAWSPQEQWNHKLLVTHGGGCG
ASYTPGSPPLADYSGTFDGVPLVTPSYVTALGRGFAVLSTALDNTGHNCSVAMNAESVLMAKERLVEQYGELRYTIGTGC
SGGSIAQHTVANAYPGIYQGLVTTCSYPDTFTAGAQFADYHLLRLYFEDPSRWGPGVVWTPVQMAMVEGHLSHVNAVVAD
EGLFKAALDPEHACSGTVDPRPGDPATRYDSETNPGGVRCSVLDLLVNQLGRRPASVWTPQEQAAGHGFGGIPFSNTGVL
YGLAELKAGTITTAQFVDLNAKLGGLDVDSQAIPERIAGDPASIARAYRTGLINEANHLDEVAMINHGGPDPGIAHDYAH
AFWTQERLQADQGNTDNRVMWFGPTPLIGDVRWAGEALLAMDRWLAAVEQDHGPEPLAQKIAADRPADVTDRCVVAEAAD
ACDVQELQVLQTRLSTPRQEAGGPLANDVVACRLTPLDRAAFDFLLVPFTDAEWATLQATFPDGVCDWSQPGLGQGPAET
WLRYDAADGGPAYGGRNLPPPPADSGLGTLGPVWTEMLTK

Sequences:

>Translated_920_residues
MWIPTEHDAETRRDHRERAGRGSGLVGVGVLLGVGVVAESGAQALQRAPGGEGELRCRVSVQVVVADGPEPDARCGVRLV
GAQHRDRGDLIPVVGQLDVDVPGGGLHVLLLSLFAGTLLVPMRVNPAVTGGTTDHLHPWAGTLVPLRPGHVTAATVRRCR
GMRSRLLLVLLALVAPVLVALPSGGSAAATRGALQVQVLSNRADLISGGDALVAVRIPAGVDPGRVRVVVDDRDVTDRFA
VRADGRYVGLVDGLALGRNVLRATVPGVSGVAGDHAVIVDHPNGGPVFSGPQTEHYRCQESARDAQCNEPATYDYLYRST
DPLTPDLQPYDPDNPPSDVATTTTDQGVEVPFVVRRERGYQDRDRYTILTLFQPGRPWRAWSPQEQWNHKLLVTHGGGCG
ASYTPGSPPLADYSGTFDGVPLVTPSYVTALGRGFAVLSTALDNTGHNCSVAMNAESVLMAKERLVEQYGELRYTIGTGC
SGGSIAQHTVANAYPGIYQGLVTTCSYPDTFTAGAQFADYHLLRLYFEDPSRWGPGVVWTPVQMAMVEGHLSHVNAVVAD
EGLFKAALDPEHACSGTVDPRPGDPATRYDSETNPGGVRCSVLDLLVNQLGRRPASVWTPQEQAAGHGFGGIPFSNTGVL
YGLAELKAGTITTAQFVDLNAKLGGLDVDSQAIPERIAGDPASIARAYRTGLINEANHLDEVAMINHGGPDPGIAHDYAH
AFWTQERLQADQGNTDNRVMWFGPTPLIGDVRWAGEALLAMDRWLAAVEQDHGPEPLAQKIAADRPADVTDRCVVAEAAD
ACDVQELQVLQTRLSTPRQEAGGPLANDVVACRLTPLDRAAFDFLLVPFTDAEWATLQATFPDGVCDWSQPGLGQGPAET
WLRYDAADGGPAYGGRNLPPPPADSGLGTLGPVWTEMLTK
>Mature_920_residues
MWIPTEHDAETRRDHRERAGRGSGLVGVGVLLGVGVVAESGAQALQRAPGGEGELRCRVSVQVVVADGPEPDARCGVRLV
GAQHRDRGDLIPVVGQLDVDVPGGGLHVLLLSLFAGTLLVPMRVNPAVTGGTTDHLHPWAGTLVPLRPGHVTAATVRRCR
GMRSRLLLVLLALVAPVLVALPSGGSAAATRGALQVQVLSNRADLISGGDALVAVRIPAGVDPGRVRVVVDDRDVTDRFA
VRADGRYVGLVDGLALGRNVLRATVPGVSGVAGDHAVIVDHPNGGPVFSGPQTEHYRCQESARDAQCNEPATYDYLYRST
DPLTPDLQPYDPDNPPSDVATTTTDQGVEVPFVVRRERGYQDRDRYTILTLFQPGRPWRAWSPQEQWNHKLLVTHGGGCG
ASYTPGSPPLADYSGTFDGVPLVTPSYVTALGRGFAVLSTALDNTGHNCSVAMNAESVLMAKERLVEQYGELRYTIGTGC
SGGSIAQHTVANAYPGIYQGLVTTCSYPDTFTAGAQFADYHLLRLYFEDPSRWGPGVVWTPVQMAMVEGHLSHVNAVVAD
EGLFKAALDPEHACSGTVDPRPGDPATRYDSETNPGGVRCSVLDLLVNQLGRRPASVWTPQEQAAGHGFGGIPFSNTGVL
YGLAELKAGTITTAQFVDLNAKLGGLDVDSQAIPERIAGDPASIARAYRTGLINEANHLDEVAMINHGGPDPGIAHDYAH
AFWTQERLQADQGNTDNRVMWFGPTPLIGDVRWAGEALLAMDRWLAAVEQDHGPEPLAQKIAADRPADVTDRCVVAEAAD
ACDVQELQVLQTRLSTPRQEAGGPLANDVVACRLTPLDRAAFDFLLVPFTDAEWATLQATFPDGVCDWSQPGLGQGPAET
WLRYDAADGGPAYGGRNLPPPPADSGLGTLGPVWTEMLTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97826; Mature: 97826

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWIPTEHDAETRRDHRERAGRGSGLVGVGVLLGVGVVAESGAQALQRAPGGEGELRCRVS
CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
VQVVVADGPEPDARCGVRLVGAQHRDRGDLIPVVGQLDVDVPGGGLHVLLLSLFAGTLLV
EEEEEECCCCCCHHCCEEEECCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHEEE
PMRVNPAVTGGTTDHLHPWAGTLVPLRPGHVTAATVRRCRGMRSRLLLVLLALVAPVLVA
EEECCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
LPSGGSAAATRGALQVQVLSNRADLISGGDALVAVRIPAGVDPGRVRVVVDDRDVTDRFA
CCCCCCCHHHCCEEEEEEECCCCCEECCCCEEEEEEECCCCCCCEEEEEECCCCCCCCEE
VRADGRYVGLVDGLALGRNVLRATVPGVSGVAGDHAVIVDHPNGGPVFSGPQTEHYRCQE
EEECCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHH
SARDAQCNEPATYDYLYRSTDPLTPDLQPYDPDNPPSDVATTTTDQGVEVPFVVRRERGY
HHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCC
QDRDRYTILTLFQPGRPWRAWSPQEQWNHKLLVTHGGGCGASYTPGSPPLADYSGTFDGV
CCCCCEEEEEEECCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PLVTPSYVTALGRGFAVLSTALDNTGHNCSVAMNAESVLMAKERLVEQYGELRYTIGTGC
CCCCHHHHHHHHCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCEEEEEECCC
SGGSIAQHTVANAYPGIYQGLVTTCSYPDTFTAGAQFADYHLLRLYFEDPSRWGPGVVWT
CCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHCEEEEEEEECCCCCCCCCEEEC
PVQMAMVEGHLSHVNAVVADEGLFKAALDPEHACSGTVDPRPGDPATRYDSETNPGGVRC
HHHHHHHHHHHHHHHEEEECCCCCEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEH
SVLDLLVNQLGRRPASVWTPQEQAAGHGFGGIPFSNTGVLYGLAELKAGTITTAQFVDLN
HHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEHHHHCCCCEEEEEEEEEC
AKLGGLDVDSQAIPERIAGDPASIARAYRTGLINEANHLDEVAMINHGGPDPGIAHDYAH
CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHEEEEECCCCCCCCHHHHHH
AFWTQERLQADQGNTDNRVMWFGPTPLIGDVRWAGEALLAMDRWLAAVEQDHGPEPLAQK
HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
IAADRPADVTDRCVVAEAADACDVQELQVLQTRLSTPRQEAGGPLANDVVACRLTPLDRA
HHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCC
AFDFLLVPFTDAEWATLQATFPDGVCDWSQPGLGQGPAETWLRYDAADGGPAYGGRNLPP
CEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCCCC
PPADSGLGTLGPVWTEMLTK
CCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MWIPTEHDAETRRDHRERAGRGSGLVGVGVLLGVGVVAESGAQALQRAPGGEGELRCRVS
CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
VQVVVADGPEPDARCGVRLVGAQHRDRGDLIPVVGQLDVDVPGGGLHVLLLSLFAGTLLV
EEEEEECCCCCCHHCCEEEECCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHEEE
PMRVNPAVTGGTTDHLHPWAGTLVPLRPGHVTAATVRRCRGMRSRLLLVLLALVAPVLVA
EEECCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
LPSGGSAAATRGALQVQVLSNRADLISGGDALVAVRIPAGVDPGRVRVVVDDRDVTDRFA
CCCCCCCHHHCCEEEEEEECCCCCEECCCCEEEEEEECCCCCCCEEEEEECCCCCCCCEE
VRADGRYVGLVDGLALGRNVLRATVPGVSGVAGDHAVIVDHPNGGPVFSGPQTEHYRCQE
EEECCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHH
SARDAQCNEPATYDYLYRSTDPLTPDLQPYDPDNPPSDVATTTTDQGVEVPFVVRRERGY
HHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCC
QDRDRYTILTLFQPGRPWRAWSPQEQWNHKLLVTHGGGCGASYTPGSPPLADYSGTFDGV
CCCCCEEEEEEECCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PLVTPSYVTALGRGFAVLSTALDNTGHNCSVAMNAESVLMAKERLVEQYGELRYTIGTGC
CCCCHHHHHHHHCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCEEEEEECCC
SGGSIAQHTVANAYPGIYQGLVTTCSYPDTFTAGAQFADYHLLRLYFEDPSRWGPGVVWT
CCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHCEEEEEEEECCCCCCCCCEEEC
PVQMAMVEGHLSHVNAVVADEGLFKAALDPEHACSGTVDPRPGDPATRYDSETNPGGVRC
HHHHHHHHHHHHHHHEEEECCCCCEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEH
SVLDLLVNQLGRRPASVWTPQEQAAGHGFGGIPFSNTGVLYGLAELKAGTITTAQFVDLN
HHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEHHHHCCCCEEEEEEEEEC
AKLGGLDVDSQAIPERIAGDPASIARAYRTGLINEANHLDEVAMINHGGPDPGIAHDYAH
CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHEEEEECCCCCCCCHHHHHH
AFWTQERLQADQGNTDNRVMWFGPTPLIGDVRWAGEALLAMDRWLAAVEQDHGPEPLAQK
HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
IAADRPADVTDRCVVAEAADACDVQELQVLQTRLSTPRQEAGGPLANDVVACRLTPLDRA
HHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCC
AFDFLLVPFTDAEWATLQATFPDGVCDWSQPGLGQGPAETWLRYDAADGGPAYGGRNLPP
CEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCCCC
PPADSGLGTLGPVWTEMLTK
CCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA