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The map label for this gene is ydfJ [H]

Identifier: 119718461

GI number: 119718461

Start: 4478909

End: 4481437

Strand: Reverse

Name: ydfJ [H]

Synonym: Noca_4242

Alternate gene names: 119718461

Gene position: 4481437-4478909 (Counterclockwise)

Preceding gene: 119718462

Following gene: 119718460

Centisome position: 89.88

GC content: 74.46

Gene sequence:

>2529_bases
ATGCTGCGAACCCTGGCCACCTTCTCGGTGCGCCACCGCTTCCTGGTCGTGATCGCCTGGCTGATCCTCGTGGCCGGCGT
GCTGTTCGCCGGGCAGTCCTACGGCGGCTCGTTCAGCAACGACCTGTCCTTGAAGGACACCGACTCCCAGCAGGCCTACG
ACGAGCTGCGGGCGAAGTTCCCCGAGATGTCCGGCGACGGCATGCAGGTCGTGATCCACGACGACAAGGGCGTCGACCAG
GGGCAGGTCCGCGCCGCGGTGGAGGCGGCCGTCGCCGACGTCGCCGGCCGGCCGGGCGTCGCGTCCGCGGCCTCGCCGTA
CGGCCCGGGCCCGCAGATGGTCTCCGCCGACGGCACCACCGCGGTCGCGACGGTCCGCTTCGACGAGCGCGCGACCGACA
TCGCCGAGGCGGACCTCACCGCGGCGCAGGAGGCCTTCGCGCCGGTCGCCGACCTCGGCGTGCAGGTGGAGTACGGCGGC
GCCGCGCTCGACGCGGAGAACCACCCGTCCGGCAGCGAGGCGATCGGGCTCGCCGCCGCGGTCCTGGTGCTGTTGCTGGC
CTTCGGCTCGGTGTTCGCGATGCTGGTCCCGCTGCTCACCGCCGTGCTGGCCCTCGGGCTCGGGATGGGGATCATCTTCC
TGCTCTCCGACCAGGTCACCATCGGCACCGCCGGGCCCGTCGTCGCGGCGATGATCGGCCTGGGCGTCGGCATCGACTAC
GCGCTGCTCGTGGTCACCCGCCATCGGGAGGGGCTGGCCACCGGCCACTCCGCGCGCGAGTCGATCCCGATCGCGCTGTC
CACGGCCGGCCGCTCGGTGCTGGTCGCCGGCACCACCGTGATCATCGCGATCCTGTCGCTCTACGCCATCGGCATCCCGT
TCGTCGCCACCCTGGGCCTGGCCAGCGCGATCACCGTCGCGACCACGATGCTCGCCGCGGTGACCCTGCTGCCCGCGCTG
CTCGCGGTGTTCGGCGACCAGCTGGACCGGCTCCGGGTACGCCGCCCGCGGCTCGACCACGGCGGCGGCCGGGTCAGCGG
CTGGCACCGGTGGACCCGGCACGTGCAGCGCCGGCCCTGGCCGTACCTGCTCGCCGCGGTCGCGGTGCTGGCCACGCTCG
CGATCCCGCTGCTCGACCTGCGCCTGGGCACCGCCGACGACGGCTCCGCCCCCGTGGGCAGCACCGAGCGGGCGGCGTAC
GACCTGATCGCCACCGACTTCGGGCCCGGCTGGACCGGCCCGCTCGTGGTGACCGCGAGCTACCCCGACGGCACCGCCGC
GGAGACCCAGCGCTCCGCGAAGGCGCTCGCGGGCGAGATCGCCGGCGTCGAGGGCGTCGAGCAGGTGTCCCCGCCGGCCG
TCAACGAGGCCGGCGACACCGCCGTGCTCACCGTGGTGCCGAGTACCTCTCCGGACGACCAGGCCACCGAGGACCTGGTC
CACCGGCTCCGCGACCAGGTGGGCCGGGACGGCGCCGCCGACGACACCCGGGCTCAGCCCCAGGCCCGGCCTGAGCCCGA
GGTGCACGTCGGCGGCGCCACCGCCACCAACATCGACCTCGCGGACAAGCTGACCGACCGGATGCCGTGGTTCATGGCCT
TCGTCGTGGGCCTGAGCTTCCTGCTGCTGCTCGTCGAGTTCCGCTCGATCTTCGTGCCGGTCAAGGCCGCGCTGATGAAC
CTGCTCTCGGTGGGTGCGGCGTACGGCGCGGTGGTCGCGATCTTCCAGTGGGGCTGGCTCTCCGACGTGTTCGGCGCCCA
GCCCGGGCCGATCGAGTCGTTCGCGCCGATGATGCTGTTCGCGGTGCTGTTCGGGCTGTCGATGGACTACGAGGTGTTCC
TGCTCAGCCGGGTCCGCGAGGAGTACCTGCGCACCGGCCAGGCCGGGGCCGCGGTCGCCGACGGGATCGCCGCGACCGCC
CGGGTGATCACCGCCGCCGCCTCGGTGATGGTGGTGGTCTTCGCCAGCTTCCTGCTCAACGACGACCGGGTCGTGAACCT
GTTCGGCTTCGGCCTGGCGGTCGCGATCGCGATCGACGCGACCCTGGTCCGGCTGGTCCTGGTGCCCGCGCTGATGGCGG
TCGCGGGACGGCTGGCGTGGTACCTGCCGCCCTGGCTGGACCGGGTGCTGCCCCGGATCGAGCTCGAGCCGCACCCGGTC
GACCCGTACGAGGAGGAGCTCGACCGGCTCGACCCCGACGTGCGGGACGTCGTCCTCGCCGAGGAGCCCCCGGTCCCGGC
CGGGCCCGGGGCGCACCTCGAGCGGGGCGCCGAGGACCCCCGGGCCGCGCTCGAGACGCTGCGCGACGTCGTCGCGGAGC
GCGACGCCTACCTCCAGGACTACCTGGAGACCCGCGCCGAGCTCGAGCGGGTCCGGGCCCAGCACGAGGCCGTGGTCGAG
GCGCTGCGCACGATCCAGGAGGCGGGCGCCGGGAACGGCGTCGCCCTGAACGGGTCGCGGGCCGCCCGGCGCTCCCGCCG
GGCCCAGGCCGCGCCGCGGGCCCGCGACGGCGACGGCGACGGCGGCTGA

Upstream 100 bases:

>100_bases
CGGGCCCTGCTACAGTTCCCGCAAGTGAGACGACAGTGTCTCAGTTAGTCCGTGAGGGTCCGGTCGGTCCGGGCCGACCG
CCGCACCGACGGGAGCCCTG

Downstream 100 bases:

>100_bases
GGATGTACGCCGCCATGACCTGCGTCCCCGACGACGACCACGAGGTGCTCCGGCTGCAGCTGATGACCGCCGGCCGCGGG
CTGCTCGCGGCGTTCGAGGC

Product: MMPL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 842; Mature: 842

Protein sequence:

>842_residues
MLRTLATFSVRHRFLVVIAWLILVAGVLFAGQSYGGSFSNDLSLKDTDSQQAYDELRAKFPEMSGDGMQVVIHDDKGVDQ
GQVRAAVEAAVADVAGRPGVASAASPYGPGPQMVSADGTTAVATVRFDERATDIAEADLTAAQEAFAPVADLGVQVEYGG
AALDAENHPSGSEAIGLAAAVLVLLLAFGSVFAMLVPLLTAVLALGLGMGIIFLLSDQVTIGTAGPVVAAMIGLGVGIDY
ALLVVTRHREGLATGHSARESIPIALSTAGRSVLVAGTTVIIAILSLYAIGIPFVATLGLASAITVATTMLAAVTLLPAL
LAVFGDQLDRLRVRRPRLDHGGGRVSGWHRWTRHVQRRPWPYLLAAVAVLATLAIPLLDLRLGTADDGSAPVGSTERAAY
DLIATDFGPGWTGPLVVTASYPDGTAAETQRSAKALAGEIAGVEGVEQVSPPAVNEAGDTAVLTVVPSTSPDDQATEDLV
HRLRDQVGRDGAADDTRAQPQARPEPEVHVGGATATNIDLADKLTDRMPWFMAFVVGLSFLLLLVEFRSIFVPVKAALMN
LLSVGAAYGAVVAIFQWGWLSDVFGAQPGPIESFAPMMLFAVLFGLSMDYEVFLLSRVREEYLRTGQAGAAVADGIAATA
RVITAAASVMVVVFASFLLNDDRVVNLFGFGLAVAIAIDATLVRLVLVPALMAVAGRLAWYLPPWLDRVLPRIELEPHPV
DPYEEELDRLDPDVRDVVLAEEPPVPAGPGAHLERGAEDPRAALETLRDVVAERDAYLQDYLETRAELERVRAQHEAVVE
ALRTIQEAGAGNGVALNGSRAARRSRRAQAAPRARDGDGDGG

Sequences:

>Translated_842_residues
MLRTLATFSVRHRFLVVIAWLILVAGVLFAGQSYGGSFSNDLSLKDTDSQQAYDELRAKFPEMSGDGMQVVIHDDKGVDQ
GQVRAAVEAAVADVAGRPGVASAASPYGPGPQMVSADGTTAVATVRFDERATDIAEADLTAAQEAFAPVADLGVQVEYGG
AALDAENHPSGSEAIGLAAAVLVLLLAFGSVFAMLVPLLTAVLALGLGMGIIFLLSDQVTIGTAGPVVAAMIGLGVGIDY
ALLVVTRHREGLATGHSARESIPIALSTAGRSVLVAGTTVIIAILSLYAIGIPFVATLGLASAITVATTMLAAVTLLPAL
LAVFGDQLDRLRVRRPRLDHGGGRVSGWHRWTRHVQRRPWPYLLAAVAVLATLAIPLLDLRLGTADDGSAPVGSTERAAY
DLIATDFGPGWTGPLVVTASYPDGTAAETQRSAKALAGEIAGVEGVEQVSPPAVNEAGDTAVLTVVPSTSPDDQATEDLV
HRLRDQVGRDGAADDTRAQPQARPEPEVHVGGATATNIDLADKLTDRMPWFMAFVVGLSFLLLLVEFRSIFVPVKAALMN
LLSVGAAYGAVVAIFQWGWLSDVFGAQPGPIESFAPMMLFAVLFGLSMDYEVFLLSRVREEYLRTGQAGAAVADGIAATA
RVITAAASVMVVVFASFLLNDDRVVNLFGFGLAVAIAIDATLVRLVLVPALMAVAGRLAWYLPPWLDRVLPRIELEPHPV
DPYEEELDRLDPDVRDVVLAEEPPVPAGPGAHLERGAEDPRAALETLRDVVAERDAYLQDYLETRAELERVRAQHEAVVE
ALRTIQEAGAGNGVALNGSRAARRSRRAQAAPRARDGDGDGG
>Mature_842_residues
MLRTLATFSVRHRFLVVIAWLILVAGVLFAGQSYGGSFSNDLSLKDTDSQQAYDELRAKFPEMSGDGMQVVIHDDKGVDQ
GQVRAAVEAAVADVAGRPGVASAASPYGPGPQMVSADGTTAVATVRFDERATDIAEADLTAAQEAFAPVADLGVQVEYGG
AALDAENHPSGSEAIGLAAAVLVLLLAFGSVFAMLVPLLTAVLALGLGMGIIFLLSDQVTIGTAGPVVAAMIGLGVGIDY
ALLVVTRHREGLATGHSARESIPIALSTAGRSVLVAGTTVIIAILSLYAIGIPFVATLGLASAITVATTMLAAVTLLPAL
LAVFGDQLDRLRVRRPRLDHGGGRVSGWHRWTRHVQRRPWPYLLAAVAVLATLAIPLLDLRLGTADDGSAPVGSTERAAY
DLIATDFGPGWTGPLVVTASYPDGTAAETQRSAKALAGEIAGVEGVEQVSPPAVNEAGDTAVLTVVPSTSPDDQATEDLV
HRLRDQVGRDGAADDTRAQPQARPEPEVHVGGATATNIDLADKLTDRMPWFMAFVVGLSFLLLLVEFRSIFVPVKAALMN
LLSVGAAYGAVVAIFQWGWLSDVFGAQPGPIESFAPMMLFAVLFGLSMDYEVFLLSRVREEYLRTGQAGAAVADGIAATA
RVITAAASVMVVVFASFLLNDDRVVNLFGFGLAVAIAIDATLVRLVLVPALMAVAGRLAWYLPPWLDRVLPRIELEPHPV
DPYEEELDRLDPDVRDVVLAEEPPVPAGPGAHLERGAEDPRAALETLRDVVAERDAYLQDYLETRAELERVRAQHEAVVE
ALRTIQEAGAGNGVALNGSRAARRSRRAQAAPRARDGDGDGG

Specific function: Involved In Protein Export. [C]

COG id: COG2409

COG function: function code R; Predicted drug exporters of the RND superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004869
- InterPro:   IPR000731 [H]

Pfam domain/function: PF03176 MMPL [H]

EC number: NA

Molecular weight: Translated: 88568; Mature: 88568

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTLATFSVRHRFLVVIAWLILVAGVLFAGQSYGGSFSNDLSLKDTDSQQAYDELRAKF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
PEMSGDGMQVVIHDDKGVDQGQVRAAVEAAVADVAGRPGVASAASPYGPGPQMVSADGTT
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCE
AVATVRFDERATDIAEADLTAAQEAFAPVADLGVQVEYGGAALDAENHPSGSEAIGLAAA
EEEEEEECCHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCEEECCCCCCCCHHHHHHHHH
VLVLLLAFGSVFAMLVPLLTAVLALGLGMGIIFLLSDQVTIGTAGPVVAAMIGLGVGIDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEECCCHHHHHHHHHHCCCHHH
ALLVVTRHREGLATGHSARESIPIALSTAGRSVLVAGTTVIIAILSLYAIGIPFVATLGL
HHHEEECCCCCCCCCCCHHCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ASAITVATTMLAAVTLLPALLAVFGDQLDRLRVRRPRLDHGGGRVSGWHRWTRHVQRRPW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCH
PYLLAAVAVLATLAIPLLDLRLGTADDGSAPVGSTERAAYDLIATDFGPGWTGPLVVTAS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEC
YPDGTAAETQRSAKALAGEIAGVEGVEQVSPPAVNEAGDTAVLTVVPSTSPDDQATEDLV
CCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHH
HRLRDQVGRDGAADDTRAQPQARPEPEVHVGGATATNIDLADKLTDRMPWFMAFVVGLSF
HHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLLLVEFRSIFVPVKAALMNLLSVGAAYGAVVAIFQWGWLSDVFGAQPGPIESFAPMMLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AVLFGLSMDYEVFLLSRVREEYLRTGQAGAAVADGIAATARVITAAASVMVVVFASFLLN
HHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DDRVVNLFGFGLAVAIAIDATLVRLVLVPALMAVAGRLAWYLPPWLDRVLPRIELEPHPV
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC
DPYEEELDRLDPDVRDVVLAEEPPVPAGPGAHLERGAEDPRAALETLRDVVAERDAYLQD
CHHHHHHHHCCCCHHHEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
YLETRAELERVRAQHEAVVEALRTIQEAGAGNGVALNGSRAARRSRRAQAAPRARDGDGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCC
GG
CC
>Mature Secondary Structure
MLRTLATFSVRHRFLVVIAWLILVAGVLFAGQSYGGSFSNDLSLKDTDSQQAYDELRAKF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
PEMSGDGMQVVIHDDKGVDQGQVRAAVEAAVADVAGRPGVASAASPYGPGPQMVSADGTT
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCE
AVATVRFDERATDIAEADLTAAQEAFAPVADLGVQVEYGGAALDAENHPSGSEAIGLAAA
EEEEEEECCHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCEEECCCCCCCCHHHHHHHHH
VLVLLLAFGSVFAMLVPLLTAVLALGLGMGIIFLLSDQVTIGTAGPVVAAMIGLGVGIDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEECCCHHHHHHHHHHCCCHHH
ALLVVTRHREGLATGHSARESIPIALSTAGRSVLVAGTTVIIAILSLYAIGIPFVATLGL
HHHEEECCCCCCCCCCCHHCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ASAITVATTMLAAVTLLPALLAVFGDQLDRLRVRRPRLDHGGGRVSGWHRWTRHVQRRPW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCH
PYLLAAVAVLATLAIPLLDLRLGTADDGSAPVGSTERAAYDLIATDFGPGWTGPLVVTAS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEC
YPDGTAAETQRSAKALAGEIAGVEGVEQVSPPAVNEAGDTAVLTVVPSTSPDDQATEDLV
CCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHH
HRLRDQVGRDGAADDTRAQPQARPEPEVHVGGATATNIDLADKLTDRMPWFMAFVVGLSF
HHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLLLVEFRSIFVPVKAALMNLLSVGAAYGAVVAIFQWGWLSDVFGAQPGPIESFAPMMLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AVLFGLSMDYEVFLLSRVREEYLRTGQAGAAVADGIAATARVITAAASVMVVVFASFLLN
HHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DDRVVNLFGFGLAVAIAIDATLVRLVLVPALMAVAGRLAWYLPPWLDRVLPRIELEPHPV
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC
DPYEEELDRLDPDVRDVVLAEEPPVPAGPGAHLERGAEDPRAALETLRDVVAERDAYLQD
CHHHHHHHHCCCCHHHEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
YLETRAELERVRAQHEAVVEALRTIQEAGAGNGVALNGSRAARRSRRAQAAPRARDGDGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCC
GG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]