| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119718457
Identifier: 119718457
GI number: 119718457
Start: 4476678
End: 4477190
Strand: Reverse
Name: 119718457
Synonym: Noca_4238
Alternate gene names: NA
Gene position: 4477190-4476678 (Counterclockwise)
Preceding gene: 119718458
Following gene: 119718456
Centisome position: 89.8
GC content: 67.64
Gene sequence:
>513_bases ATGAGGAAGTCGACGAAGGGCGCCCTGGCTGCTGGAGCCGCCGCGCTGCTGCTCTTCGGGGGCATGGGCACGCGGGCGGG CTGGAGCGATGACGGGACGTTCACCGGCACGGACATCGGCACCGGCCACCTGAACCTGATCAACGCGACCTGCAACGGAT GGAAGATCGGCGCCTCCGCGTTCGATCCGGCCACGATCAAGATCGTCCCGGGGTCGGTGCTCACCCAGGTCTGCACCTTC GAGGTCGACGCCGTCGGCACCAACCTGAAGGCCACGCTCAGCGTCACGGCACCGAGCTTCGCGACGGCCAACGGCCTCAC CGGCGTGCTGACGACGGCCGCAACCTATGTGAACAACGCAGACAGCTCACCGATCGACGCGACGACCCAGCTCGCTGACG GAACCGTCATCAAGGCGACGATGACCGTGACGCTGCCGGCCTCCGCCGACAACACGATCCAGGGCCTCACCGCGACGCTC GACAACGTCACGGTGACGGCGACCCAGGCCTGA
Upstream 100 bases:
>100_bases GCTAGACCGGGTGCGGCGGTCCCTCAGCCTCGGTATGACTCGCGCCACACTCGGGTCACCCCGGTCGGAGGGGACCGGGT GTTCCGATGGGAGGGGACGC
Downstream 100 bases:
>100_bases CACCGGGTACGGCGCCCCGGGCTCGACCGGAGCGCCGGCTCCACGCCATGGCCGCGGACTCCCGGGACTCCTTCCTCGAC GGCTTCCGCCGGGCGGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRKSTKGALAAGAAALLLFGGMGTRAGWSDDGTFTGTDIGTGHLNLINATCNGWKIGASAFDPATIKIVPGSVLTQVCTF EVDAVGTNLKATLSVTAPSFATANGLTGVLTTAATYVNNADSSPIDATTQLADGTVIKATMTVTLPASADNTIQGLTATL DNVTVTATQA
Sequences:
>Translated_170_residues MRKSTKGALAAGAAALLLFGGMGTRAGWSDDGTFTGTDIGTGHLNLINATCNGWKIGASAFDPATIKIVPGSVLTQVCTF EVDAVGTNLKATLSVTAPSFATANGLTGVLTTAATYVNNADSSPIDATTQLADGTVIKATMTVTLPASADNTIQGLTATL DNVTVTATQA >Mature_170_residues MRKSTKGALAAGAAALLLFGGMGTRAGWSDDGTFTGTDIGTGHLNLINATCNGWKIGASAFDPATIKIVPGSVLTQVCTF EVDAVGTNLKATLSVTAPSFATANGLTGVLTTAATYVNNADSSPIDATTQLADGTVIKATMTVTLPASADNTIQGLTATL DNVTVTATQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16968; Mature: 16968
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSTKGALAAGAAALLLFGGMGTRAGWSDDGTFTGTDIGTGHLNLINATCNGWKIGASA CCCCCCCCHHHHHHEEEEECCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCEEECCCC FDPATIKIVPGSVLTQVCTFEVDAVGTNLKATLSVTAPSFATANGLTGVLTTAATYVNNA CCCEEEEEECCHHHHHHHEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCC DSSPIDATTQLADGTVIKATMTVTLPASADNTIQGLTATLDNVTVTATQA CCCCCCCEEECCCCEEEEEEEEEEEECCCCCCCCCEEEECCCEEEEEECC >Mature Secondary Structure MRKSTKGALAAGAAALLLFGGMGTRAGWSDDGTFTGTDIGTGHLNLINATCNGWKIGASA CCCCCCCCHHHHHHEEEEECCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCEEECCCC FDPATIKIVPGSVLTQVCTFEVDAVGTNLKATLSVTAPSFATANGLTGVLTTAATYVNNA CCCEEEEEECCHHHHHHHEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCC DSSPIDATTQLADGTVIKATMTVTLPASADNTIQGLTATLDNVTVTATQA CCCCCCCEEECCCCEEEEEEEEEEEECCCCCCCCCEEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA