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The map label for this gene is sseA [C]

Identifier: 119718449

GI number: 119718449

Start: 4471541

End: 4472389

Strand: Reverse

Name: sseA [C]

Synonym: Noca_4230

Alternate gene names: 119718449

Gene position: 4472389-4471541 (Counterclockwise)

Preceding gene: 119718450

Following gene: 119718448

Centisome position: 89.7

GC content: 68.43

Gene sequence:

>849_bases
ATGAGCCGCGAGACTTCCCTCGTCACCGCCCAGTGGGTGGAGGAGCACCTGGACGACCCGAAGGTCGTGCTGATCGAGGT
CGACGAGGACACCACCGCCTACGACAAGGGCCACATCAAGGGCGCCGTCAAGCTCGACTGGACGACCGACCTGCAGGACC
AGGTCCGGCGCGACTTCGTCAACAAGCAGCAGTTCGAGGCGCTGCTCTCCGAGCGCGGCGTCGCCAACGACCACACCGTG
GTCCTCTACGGCGGCAACAACAACTGGTTCGCCGCCTACGCCTACTGGTACTTCAAGCTCTACGGCCACCAGGACCTCAA
GCTGCTCGACGGCGGCCGCAAGAAGTGGGAGCTGGACTCCCGCGAGCTGACCGAGGAGCGGCCGACCCGCGCGAAGACGT
CGTACACCGCCCAGGAGCAGGACCTCTCGATCCGCGCGTTCCGCGACGACACCGTCGCCGCGATCGGCGTGAAGAACCTG
GTCGACGTGCGCAGCCCCGACGAGTACGCCGGCCGGCTGCTCGCCCCGGCCCACCTGCCCCAGGAGCAGGCGCAGCGCGC
CGGCCACGTGCCCACCTCGATCAACGTGCCGTGGAGCAAGGCGGCCAACGACGACGGCACCTTCAAGTCCGACGAGGAGC
TCAAGGCGCTGTACGCCGACGCCGGCCTCGACGACGCCAAGGAGACCATCGCCCTGTGCCGGATTGGCGAGCGCTCCTCG
CACACCTGGTTCGTGCTCAAGGAGCTGCTCGGCCACCAGAGCGTGAAGAACTACGACGGCTCCTGGACCGAGTACGGCTC
CCTCGTCGGCGTCCCGGTCGCCATCGGCGACGAGCCCGGGGAGGCCTGA

Upstream 100 bases:

>100_bases
GGCTGCGAGCTGTACCTGCTCGGCCGCCGCATCACCGCGCACTGACCCACCACCGCACACAGACCCGCAGCCGCCGCCGC
TGCACAGGAAAGGTAGACAT

Downstream 100 bases:

>100_bases
TGTGCGGCGCGACCGAGGGCGGCCTGTCCCTCGACGGCGTGGACGTCAAGAAGGAGGCCATCGTGCAGGGGCAGGTGCTC
CGCGACGGCGAGCCGGTCCC

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: Rhodanese-like protein [H]

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSRETSLVTAQWVEEHLDDPKVVLIEVDEDTTAYDKGHIKGAVKLDWTTDLQDQVRRDFVNKQQFEALLSERGVANDHTV
VLYGGNNNWFAAYAYWYFKLYGHQDLKLLDGGRKKWELDSRELTEERPTRAKTSYTAQEQDLSIRAFRDDTVAAIGVKNL
VDVRSPDEYAGRLLAPAHLPQEQAQRAGHVPTSINVPWSKAANDDGTFKSDEELKALYADAGLDDAKETIALCRIGERSS
HTWFVLKELLGHQSVKNYDGSWTEYGSLVGVPVAIGDEPGEA

Sequences:

>Translated_282_residues
MSRETSLVTAQWVEEHLDDPKVVLIEVDEDTTAYDKGHIKGAVKLDWTTDLQDQVRRDFVNKQQFEALLSERGVANDHTV
VLYGGNNNWFAAYAYWYFKLYGHQDLKLLDGGRKKWELDSRELTEERPTRAKTSYTAQEQDLSIRAFRDDTVAAIGVKNL
VDVRSPDEYAGRLLAPAHLPQEQAQRAGHVPTSINVPWSKAANDDGTFKSDEELKALYADAGLDDAKETIALCRIGERSS
HTWFVLKELLGHQSVKNYDGSWTEYGSLVGVPVAIGDEPGEA
>Mature_281_residues
SRETSLVTAQWVEEHLDDPKVVLIEVDEDTTAYDKGHIKGAVKLDWTTDLQDQVRRDFVNKQQFEALLSERGVANDHTVV
LYGGNNNWFAAYAYWYFKLYGHQDLKLLDGGRKKWELDSRELTEERPTRAKTSYTAQEQDLSIRAFRDDTVAAIGVKNLV
DVRSPDEYAGRLLAPAHLPQEQAQRAGHVPTSINVPWSKAANDDGTFKSDEELKALYADAGLDDAKETIALCRIGERSSH
TWFVLKELLGHQSVKNYDGSWTEYGSLVGVPVAIGDEPGEA

Specific function: May be a sulfotransferase involved in the formation of thiosulfate [H]

COG id: COG2897

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 rhodanese domains [H]

Homologues:

Organism=Homo sapiens, GI17402865, Length=277, Percent_Identity=25.9927797833935, Blast_Score=95, Evalue=5e-20,
Organism=Homo sapiens, GI194473668, Length=277, Percent_Identity=25.6317689530686, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI61835204, Length=277, Percent_Identity=25.6317689530686, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI194473681, Length=277, Percent_Identity=25.6317689530686, Blast_Score=93, Evalue=3e-19,
Organism=Escherichia coli, GI87082121, Length=281, Percent_Identity=27.7580071174377, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI87081967, Length=279, Percent_Identity=27.2401433691756, Blast_Score=77, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17561888, Length=294, Percent_Identity=25.1700680272109, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI71997283, Length=299, Percent_Identity=24.4147157190635, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI115534702, Length=216, Percent_Identity=26.3888888888889, Blast_Score=71, Evalue=8e-13,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001307 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: =2.8.1.1 [H]

Molecular weight: Translated: 31684; Mature: 31553

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00683 RHODANESE_2 ; PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRETSLVTAQWVEEHLDDPKVVLIEVDEDTTAYDKGHIKGAVKLDWTTDLQDQVRRDFV
CCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHC
NKQQFEALLSERGVANDHTVVLYGGNNNWFAAYAYWYFKLYGHQDLKLLDGGRKKWELDS
CHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCEEEECCCCCEECCCH
RELTEERPTRAKTSYTAQEQDLSIRAFRDDTVAAIGVKNLVDVRSPDEYAGRLLAPAHLP
HHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEHHHHHHHCCCCCHHHHCCCCCCCCCC
QEQAQRAGHVPTSINVPWSKAANDDGTFKSDEELKALYADAGLDDAKETIALCRIGERSS
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
HTWFVLKELLGHQSVKNYDGSWTEYGSLVGVPVAIGDEPGEA
CHHHHHHHHHCCCHHCCCCCCHHHCCCEEEEEEEECCCCCCC
>Mature Secondary Structure 
SRETSLVTAQWVEEHLDDPKVVLIEVDEDTTAYDKGHIKGAVKLDWTTDLQDQVRRDFV
CCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHC
NKQQFEALLSERGVANDHTVVLYGGNNNWFAAYAYWYFKLYGHQDLKLLDGGRKKWELDS
CHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCEEEECCCCCEECCCH
RELTEERPTRAKTSYTAQEQDLSIRAFRDDTVAAIGVKNLVDVRSPDEYAGRLLAPAHLP
HHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEHHHHHHHCCCCCHHHHCCCCCCCCCC
QEQAQRAGHVPTSINVPWSKAANDDGTFKSDEELKALYADAGLDDAKETIALCRIGERSS
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
HTWFVLKELLGHQSVKNYDGSWTEYGSLVGVPVAIGDEPGEA
CHHHHHHHHHCCCHHCCCCCCHHHCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA