| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718423
Identifier: 119718423
GI number: 119718423
Start: 4443092
End: 4444066
Strand: Reverse
Name: 119718423
Synonym: Noca_4204
Alternate gene names: NA
Gene position: 4444066-4443092 (Counterclockwise)
Preceding gene: 119718435
Following gene: 119718422
Centisome position: 89.13
GC content: 73.64
Gene sequence:
>975_bases ATGTCTTCACCCGTTGTCGCCGAGGTCGTTCGTTCCGGGTTCGTGGAGGGCCACCACTACGGCTCCCTGGTCGCGCTGGC CGCTGACGGGTCCGTCGACTGGCGGGTCGGCGAGGTCGAGGCTCCGGTGCTGCCACGCTCGTGCAACAAGCCGGTGCAGG CGCTCGGCATGGTGCGGCTGGGCCTCGACCTGCCGCCTGAGCTGCTGGCGCTGGCGTGCGCGTCGCACTCGGGCGAGCAG ATCCACCTCGAGCGCGTGCAACGGATCCTGGCCGGTGCCGGGCTGGACGAGTCCGCGCTGCAGATGCCGCCGGACTATCC GCTCGACGACGACGAGCGGGATGCGGTCCTGCGGGCCGGGGGCGGGCGCACGTCGCTGCAGATGAACTGCTCGGGCAAGC ACGCGGCGATGCTGGCCACGTGCGTGCTGAACGGGTGGGACACCGCGACGTACCTCTCACCCGACCATCCGCTCCAGCAG GGGATCCGGACGACCTTCGCCGAGCTCACCGGCGAGCCGGTGGTCGTCGACGCCACCGACGGCTGTGGCGCGCCGCTGCT GTCCACGTCCCTCGTCGGCCTGGCGACGGCGTTCCGGCGGATCGCGCTGGGGGTCGACGGTGCTGGGCATCCGGACGCCG GCGCGGCGCGGATCGCGGACGCGATCCGGCGGCACCCGGAGCTCGTGTCGGGCACCCGCCGTGACGAGCGGGCCCTGCTC ACCGCGATCCCGGGCGCGATCGGGAAGGCCGGAGCGGAGTCGTGCTACGCGGTCGCGCTGCCCGATGGTCGGGCGTTCGC GCTGAAGACCGATGACGGGGCTGCGCGGGCGCGGCCGGTGCTGATGGCGGCTGCGCTGGTGCGGTCCGGCGTGGACCGGG AATCGGGTGTTGACGGCGAGGCGGTGCGGCGGACCGGGGAGTCGGTGCTGCTCGGCGGCGGGAAGCCGGTGGGGGAGATC CGGGCCTGCTTCTGA
Upstream 100 bases:
>100_bases TCGAGGTCGTCGAGCTCGCGGGGGGTGGGGCAGTACTGCGGGACGGGCGGCATCGGCACGGGAGTAATCGTGCCATCCCA CTGAAGTTAATCTGCGGGCT
Downstream 100 bases:
>100_bases GGTGTCAGCGCCCTGCGTGGGTGCGGGGATCTCGACGACGCTCGCTGGCGCTCGCTGCTCGATCACCGGGGACGCAGCTC GATCACCGGGGGCCTGGCTT
Product: L-asparaginase II
Products: NA
Alternate protein names: L-Asparaginase; Asparaginase; L-Asparaginase Rmolabile; L-Asparaginase II Protein; L-Asparaginase Rmolabile Subfamily; L-Asparaginase Rmolabile Family; Fumarate Lyase; Asparaginase-Related Protein
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSSPVVAEVVRSGFVEGHHYGSLVALAADGSVDWRVGEVEAPVLPRSCNKPVQALGMVRLGLDLPPELLALACASHSGEQ IHLERVQRILAGAGLDESALQMPPDYPLDDDERDAVLRAGGGRTSLQMNCSGKHAAMLATCVLNGWDTATYLSPDHPLQQ GIRTTFAELTGEPVVVDATDGCGAPLLSTSLVGLATAFRRIALGVDGAGHPDAGAARIADAIRRHPELVSGTRRDERALL TAIPGAIGKAGAESCYAVALPDGRAFALKTDDGAARARPVLMAAALVRSGVDRESGVDGEAVRRTGESVLLGGGKPVGEI RACF
Sequences:
>Translated_324_residues MSSPVVAEVVRSGFVEGHHYGSLVALAADGSVDWRVGEVEAPVLPRSCNKPVQALGMVRLGLDLPPELLALACASHSGEQ IHLERVQRILAGAGLDESALQMPPDYPLDDDERDAVLRAGGGRTSLQMNCSGKHAAMLATCVLNGWDTATYLSPDHPLQQ GIRTTFAELTGEPVVVDATDGCGAPLLSTSLVGLATAFRRIALGVDGAGHPDAGAARIADAIRRHPELVSGTRRDERALL TAIPGAIGKAGAESCYAVALPDGRAFALKTDDGAARARPVLMAAALVRSGVDRESGVDGEAVRRTGESVLLGGGKPVGEI RACF >Mature_323_residues SSPVVAEVVRSGFVEGHHYGSLVALAADGSVDWRVGEVEAPVLPRSCNKPVQALGMVRLGLDLPPELLALACASHSGEQI HLERVQRILAGAGLDESALQMPPDYPLDDDERDAVLRAGGGRTSLQMNCSGKHAAMLATCVLNGWDTATYLSPDHPLQQG IRTTFAELTGEPVVVDATDGCGAPLLSTSLVGLATAFRRIALGVDGAGHPDAGAARIADAIRRHPELVSGTRRDERALLT AIPGAIGKAGAESCYAVALPDGRAFALKTDDGAARARPVLMAAALVRSGVDRESGVDGEAVRRTGESVLLGGGKPVGEIR ACF
Specific function: Unknown
COG id: COG4448
COG function: function code E; L-asparaginase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33574; Mature: 33442
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPVVAEVVRSGFVEGHHYGSLVALAADGSVDWRVGEVEAPVLPRSCNKPVQALGMVRL CCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHH GLDLPPELLALACASHSGEQIHLERVQRILAGAGLDESALQMPPDYPLDDDERDAVLRAG CCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCEEECC GGRTSLQMNCSGKHAAMLATCVLNGWDTATYLSPDHPLQQGIRTTFAELTGEPVVVDATD CCCCEEEEECCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEECCC GCGAPLLSTSLVGLATAFRRIALGVDGAGHPDAGAARIADAIRRHPELVSGTRRDERALL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHCCCCCHHHHHH TAIPGAIGKAGAESCYAVALPDGRAFALKTDDGAARARPVLMAAALVRSGVDRESGVDGE HHCCCHHCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH AVRRTGESVLLGGGKPVGEIRACF HHHHCCCEEEEECCCCHHHHCCCC >Mature Secondary Structure SSPVVAEVVRSGFVEGHHYGSLVALAADGSVDWRVGEVEAPVLPRSCNKPVQALGMVRL CCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHH GLDLPPELLALACASHSGEQIHLERVQRILAGAGLDESALQMPPDYPLDDDERDAVLRAG CCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCEEECC GGRTSLQMNCSGKHAAMLATCVLNGWDTATYLSPDHPLQQGIRTTFAELTGEPVVVDATD CCCCEEEEECCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEECCC GCGAPLLSTSLVGLATAFRRIALGVDGAGHPDAGAARIADAIRRHPELVSGTRRDERALL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHCCCCCHHHHHH TAIPGAIGKAGAESCYAVALPDGRAFALKTDDGAARARPVLMAAALVRSGVDRESGVDGE HHCCCHHCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH AVRRTGESVLLGGGKPVGEIRACF HHHHCCCEEEEECCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA