Click here to switch to the map view.

The map label for this gene is 119718408

Identifier: 119718408

GI number: 119718408

Start: 4428222

End: 4429424

Strand: Reverse

Name: 119718408

Synonym: Noca_4189

Alternate gene names: NA

Gene position: 4429424-4428222 (Counterclockwise)

Preceding gene: 119718409

Following gene: 119718407

Centisome position: 88.84

GC content: 69.58

Gene sequence:

>1203_bases
ATGATCACACCCCAGGATCTGCTGCCTGAGGACGCCGACCAGGCGCTTCTCGTGGGCCGCGTGCACGACCCGGAGGTGGG
CGGACCGTGTGTCGTCGTCGTCACCGGCGGCCGCGCCATCGACATCTCTGACGTCGCCCCGACTGTGTCGGACCTCTTCG
AGCGCGACGACCTCCTCGACGCCCTGGCCGCGGCCACCGCCGCCGCGGCCGAGCGGCGCGGCTGGTCCATGACCGACCTC
GCTGCGGCCACCACCGACCAGGACGCTGCGCGCCCACGGCTGCTGGCCCCAGTCGATCTCCAGGTCGTCAAGGCCGCCGG
AGTCACCTTCGTGGAGAGCATGCTGGAGCGGGTGATCGAGGAGCGCGCTAAGGGCGATGCCGCCCGCGCGGCCGAGATCC
GCGCACAGCTCTCGGAGATCATCGGGGGGGCCATCTCGTCGGTGCGCCCCGGCAGCGAGAGCGCCGCGCGCGTCAAGGAG
CTGCTGATCGAGGAGGACCTGTGGTCCCAGTACCTCGAGGTCGGCATCGGCCCGGACCCGGAGATCTTCACCAAGGCGCC
GGTGCTGTCGGCTGTCGGATCCGGCGTGGAGATCGGCGTGCACAGCCGCTCGACGTGGAACAACCCCGAGCCCGAGGTCG
TGCTCGCGGTCCGGTCCGACGGTCGGGCGATCGGTGCCACGCTGGGCAACGACGTCAACCTCCGTGACTTCGAGGGGCGC
AGCGCCCTGTTGCTCACCGAGGCCAAGGACAACAACGCCTCGTGCGCACTGGGCCCGTTCATCCGTCTCTTCAACGACTC
ATTCACGATGGACGACATCCGTCAGATCGAGGTCCAGCTGACCGTCACCGGCGTCGACGACTTCGTGCTCGACGGCCGCA
GCTCGATGCGGAACATCAGCCGTGACCCGGAGGACCTAATCCATCACGCCTACGGTGACCACCACCAGTACCCGGACGGC
TTCATGCTCTTCACCGGCACCCTGTTCGCTCCCACCCAGGACCGGTTCGCCGAGGACGCCGGGTTTACCCACGTGCTCGG
CGACGTCGTCCGCATCGCCACCCCGCGACTCGGCGCCCTGGTCAACCGGGTCACCCACTCCGAGCAGGCCCCCCGCTGGG
AGTTCGGCATCCGTGCGCTGATGTCCAACCTCAGCGAGCGTGGCCTGCTCGCCCCGTCCGCGCCCGTCCCGGCGCAACTC
TGA

Upstream 100 bases:

>100_bases
GTCCCTGCGGGGAGTTCTGGGAGTACTTCGCCTGGCTCGAAGGCGGCAAGCCCGGCCAGTTGGGCGCCGCATCCACCACC
CATGACGAGAGGACGATTCC

Downstream 100 bases:

>100_bases
GAAGGAGAAGACGCAGTGTACGCCGTCACCAACCCGGCCACGGGCGAGCTGATCAGCGAGTTCGACACGGCAACCGACGC
GCAGGTTCGCGAGGCCGTCA

Product: putative fumarylacetoacetate hydrolase

Products: NA

Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Family Protein; Fumarylacetoacetate Hydrolase Family Protein-Like Protein; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomaerase; 2-Keto-3-Deoxy-D-Arabinonate Dehydratase; 2-Keto-3-Deoxyxylonate Dehydratase

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MITPQDLLPEDADQALLVGRVHDPEVGGPCVVVVTGGRAIDISDVAPTVSDLFERDDLLDALAAATAAAAERRGWSMTDL
AAATTDQDAARPRLLAPVDLQVVKAAGVTFVESMLERVIEERAKGDAARAAEIRAQLSEIIGGAISSVRPGSESAARVKE
LLIEEDLWSQYLEVGIGPDPEIFTKAPVLSAVGSGVEIGVHSRSTWNNPEPEVVLAVRSDGRAIGATLGNDVNLRDFEGR
SALLLTEAKDNNASCALGPFIRLFNDSFTMDDIRQIEVQLTVTGVDDFVLDGRSSMRNISRDPEDLIHHAYGDHHQYPDG
FMLFTGTLFAPTQDRFAEDAGFTHVLGDVVRIATPRLGALVNRVTHSEQAPRWEFGIRALMSNLSERGLLAPSAPVPAQL

Sequences:

>Translated_400_residues
MITPQDLLPEDADQALLVGRVHDPEVGGPCVVVVTGGRAIDISDVAPTVSDLFERDDLLDALAAATAAAAERRGWSMTDL
AAATTDQDAARPRLLAPVDLQVVKAAGVTFVESMLERVIEERAKGDAARAAEIRAQLSEIIGGAISSVRPGSESAARVKE
LLIEEDLWSQYLEVGIGPDPEIFTKAPVLSAVGSGVEIGVHSRSTWNNPEPEVVLAVRSDGRAIGATLGNDVNLRDFEGR
SALLLTEAKDNNASCALGPFIRLFNDSFTMDDIRQIEVQLTVTGVDDFVLDGRSSMRNISRDPEDLIHHAYGDHHQYPDG
FMLFTGTLFAPTQDRFAEDAGFTHVLGDVVRIATPRLGALVNRVTHSEQAPRWEFGIRALMSNLSERGLLAPSAPVPAQL
>Mature_400_residues
MITPQDLLPEDADQALLVGRVHDPEVGGPCVVVVTGGRAIDISDVAPTVSDLFERDDLLDALAAATAAAAERRGWSMTDL
AAATTDQDAARPRLLAPVDLQVVKAAGVTFVESMLERVIEERAKGDAARAAEIRAQLSEIIGGAISSVRPGSESAARVKE
LLIEEDLWSQYLEVGIGPDPEIFTKAPVLSAVGSGVEIGVHSRSTWNNPEPEVVLAVRSDGRAIGATLGNDVNLRDFEGR
SALLLTEAKDNNASCALGPFIRLFNDSFTMDDIRQIEVQLTVTGVDDFVLDGRSSMRNISRDPEDLIHHAYGDHHQYPDG
FMLFTGTLFAPTQDRFAEDAGFTHVLGDVVRIATPRLGALVNRVTHSEQAPRWEFGIRALMSNLSERGLLAPSAPVPAQL

Specific function: Unknown

COG id: COG3970

COG function: function code R; Fumarylacetoacetate (FAA) hydrolase family protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42986; Mature: 42986

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPQDLLPEDADQALLVGRVHDPEVGGPCVVVVTGGRAIDISDVAPTVSDLFERDDLLD
CCCCHHCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEECHHHHHHHHHHHHHHHHHH
ALAAATAAAAERRGWSMTDLAAATTDQDAARPRLLAPVDLQVVKAAGVTFVESMLERVIE
HHHHHHHHHHHHCCCCHHHHHHCCCCCHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHH
ERAKGDAARAAEIRAQLSEIIGGAISSVRPGSESAARVKELLIEEDLWSQYLEVGIGPDP
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EIFTKAPVLSAVGSGVEIGVHSRSTWNNPEPEVVLAVRSDGRAIGATLGNDVNLRDFEGR
CHHHCCHHHHHCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEHCCCCCCCCEECCCC
SALLLTEAKDNNASCALGPFIRLFNDSFTMDDIRQIEVQLTVTGVDDFVLDGRSSMRNIS
CEEEEEECCCCCCCEEHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHCCHHHHHHCC
RDPEDLIHHAYGDHHQYPDGFMLFTGTLFAPTQDRFAEDAGFTHVLGDVVRIATPRLGAL
CCHHHHHHHHCCCCCCCCCCEEEEECEEECCCHHHHHHHCCHHHHHHHHHHHCCCHHHHH
VNRVTHSEQAPRWEFGIRALMSNLSERGLLAPSAPVPAQL
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MITPQDLLPEDADQALLVGRVHDPEVGGPCVVVVTGGRAIDISDVAPTVSDLFERDDLLD
CCCCHHCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEECHHHHHHHHHHHHHHHHHH
ALAAATAAAAERRGWSMTDLAAATTDQDAARPRLLAPVDLQVVKAAGVTFVESMLERVIE
HHHHHHHHHHHHCCCCHHHHHHCCCCCHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHH
ERAKGDAARAAEIRAQLSEIIGGAISSVRPGSESAARVKELLIEEDLWSQYLEVGIGPDP
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EIFTKAPVLSAVGSGVEIGVHSRSTWNNPEPEVVLAVRSDGRAIGATLGNDVNLRDFEGR
CHHHCCHHHHHCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEHCCCCCCCCEECCCC
SALLLTEAKDNNASCALGPFIRLFNDSFTMDDIRQIEVQLTVTGVDDFVLDGRSSMRNIS
CEEEEEECCCCCCCEEHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHCCHHHHHHCC
RDPEDLIHHAYGDHHQYPDGFMLFTGTLFAPTQDRFAEDAGFTHVLGDVVRIATPRLGAL
CCHHHHHHHHCCCCCCCCCCEEEEECEEECCCHHHHHHHCCHHHHHHHHHHHCCCHHHHH
VNRVTHSEQAPRWEFGIRALMSNLSERGLLAPSAPVPAQL
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA