Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is pckG [H]

Identifier: 119718387

GI number: 119718387

Start: 4400083

End: 4401927

Strand: Reverse

Name: pckG [H]

Synonym: Noca_4168

Alternate gene names: 119718387

Gene position: 4401927-4400083 (Counterclockwise)

Preceding gene: 119718389

Following gene: 119718386

Centisome position: 88.29

GC content: 71.11

Gene sequence:

>1845_bases
GTGGTTGATGTGGTGATGGACCTGGAGAGCGTGCTGGACGCCGCGGGGCTGACGAACCCGCACGTGCGGGAGTACGTCGC
CCGCTGGGCCGCGATCACCGGCGCGGAGCGCGTCGAGGTGGTCGACGCGTCCGACGACGCGCGGCTGGTCAAGGAGGCAC
TCGAGGCCGGGGAGCTGCAGCCGGTCGGCGACGGCTGCTACTACTCGCGCAGCTACTCCAAGGACACGGCCCGCTCCGAG
GAGCGGACGATCGTCGCGACCAACGACCCGGCCGACAAGGGCACCTACAACAACTGGCGGCCCGCCGGGGAGATGAAGGA
GCTGCTCGAGGGGCTGATGCGCGGCGCCTCGACCGGCAAGACGATGTACGTGATCCCCTACCTGATGGCGCCTCCCGGCT
CCCCGATGGAGCGGTTCGCCGCCGGCGTCCAGGTCACCGACTGCCGGCCGGTGGTGCTGCACATGATCCGGATGTCGCGC
GTCGGCGTGCACCACATCAACGACCTCGCGGACCCGAACAGCTTCGTCCGCGCCGTGCACGTCACCGGCGACCTGGAGAA
CCTCGGCCAGGGCACGCCCGACGACCAGCGGTACTTCGTGACCGTCGCCGACGAGCGGACCATCCTCCACTACGGCTCGT
CGTACGGCGGCAACGCGCTGCTCGGCAAGATCGCCCACGGCCTGCGCCAGGCGGCGTACGACGGCCAGGCGTCCCGGGAG
TTCCTCGCCGAGCAGTTCATGCTGCTCGGGATCATCGACAACGAGACCGGCCAGCGCTTCCACGTCGCCGGCGGCTTCCC
CAGCGCCTCCGGCAAGACGAACCTCGCGATGACGCTGGCGCCCGAGGCGCTCGGCGAGCGCTACCGCGTGGAGTTCTACG
GCGACGACATCACCTGGCTGTGGATCGACTCCCAGGACGGGCGCCTCTACGGCATGAACCCGGAGTTCGGCGTCTTCGGC
GTCGCGAAGGACACCAACGAGTCGACCAACCCGACCGCGCTGGACTCGGTGCGGCCCGGCACCGGCGCGATCTTCACCAA
CGTCGCCTACAACCCGCGCACCCAGGAGGTGTGGTGGGAGGGGCGCACGCCGGAGCCGCCCTCGGACCTGGACGGCTGGC
TGGACTGGAAGGGCGAGCCGATCGCGGCGCGCGCGCCGGGTGACGAGTCGCCGTGGGCGCACCCGAACAGCCGGTTCACC
ACGACGCTGGCGAACGTGCCGAACGTCGCCGCCGACTTCGAGGAGCCGCGCGGCGTCCCGATCGATGCGATCATCTTCGG
CGGCCGGACCCGCGACCGGGAGCCGCTGGTGCGCGCGATCACCGACCTCGCCGAGGGCGTGTACGACGGCCTCACGCTGG
GCGCCGAGGCGACCTTCGCCGCCGACGGGGTGGACGGGCAGCTGCGCTACGACCCGATGTCGATGCGGCCGTTCATGTCC
TACCCCGAGGCCCGCTACGCCGCCCACTGGCTCGACGTGGTCGGCCGGGCCAGCGACCAGCCGATCTTCGCGCACGTGAA
CTGGTTCCAGCGCGACCCGGAGGACGGCCACTTCCTGTGGCCCGGCTACCGCGAGAACCTGCGCGCGCTGCTATGGCTGG
CCCGGCTCAAGGAGGGCTCGGTCACCGGGGTGCAGACCGCGGTCGGCATCCTGCCCAAGGAGGACGAGCTGCACCTCGCC
GACCTCGACCTGCCCGAGGCCGACAAGGAGCGGATCCTCTCCATCGACAAGGACCGCTGGTGCCAGGAGATGGGCTTCCG
CGAGACCCACCTCGCCCAGTTCGACGGCCTCCCCGAGGAGATCTGGGAGGCCCACCGGCGGGTCGCCCGCGACCTCGACT
GCTGA

Upstream 100 bases:

>100_bases
ACCTGAAGACTACACAACTTGCACACTTCTTCAAGTCGTGTAGCGTCCCGGGCCATCCGGGATGCGAGCATGGACCCAGT
CGAGGACAACGGAGGACCTG

Downstream 100 bases:

>100_bases
TCCCCGGTCCGAGAATTTTCGATAGTCCCTGACGGAACTGTGGTGTGGGCACGCTCCCACACCACACAAACGTCAGGGAC
TATCGTTCCGGGGTCCTGGG

Product: phosphoenolpyruvate carboxykinase

Products: NA

Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]

Number of amino acids: Translated: 614; Mature: 614

Protein sequence:

>614_residues
MVDVVMDLESVLDAAGLTNPHVREYVARWAAITGAERVEVVDASDDARLVKEALEAGELQPVGDGCYYSRSYSKDTARSE
ERTIVATNDPADKGTYNNWRPAGEMKELLEGLMRGASTGKTMYVIPYLMAPPGSPMERFAAGVQVTDCRPVVLHMIRMSR
VGVHHINDLADPNSFVRAVHVTGDLENLGQGTPDDQRYFVTVADERTILHYGSSYGGNALLGKIAHGLRQAAYDGQASRE
FLAEQFMLLGIIDNETGQRFHVAGGFPSASGKTNLAMTLAPEALGERYRVEFYGDDITWLWIDSQDGRLYGMNPEFGVFG
VAKDTNESTNPTALDSVRPGTGAIFTNVAYNPRTQEVWWEGRTPEPPSDLDGWLDWKGEPIAARAPGDESPWAHPNSRFT
TTLANVPNVAADFEEPRGVPIDAIIFGGRTRDREPLVRAITDLAEGVYDGLTLGAEATFAADGVDGQLRYDPMSMRPFMS
YPEARYAAHWLDVVGRASDQPIFAHVNWFQRDPEDGHFLWPGYRENLRALLWLARLKEGSVTGVQTAVGILPKEDELHLA
DLDLPEADKERILSIDKDRWCQEMGFRETHLAQFDGLPEEIWEAHRRVARDLDC

Sequences:

>Translated_614_residues
MVDVVMDLESVLDAAGLTNPHVREYVARWAAITGAERVEVVDASDDARLVKEALEAGELQPVGDGCYYSRSYSKDTARSE
ERTIVATNDPADKGTYNNWRPAGEMKELLEGLMRGASTGKTMYVIPYLMAPPGSPMERFAAGVQVTDCRPVVLHMIRMSR
VGVHHINDLADPNSFVRAVHVTGDLENLGQGTPDDQRYFVTVADERTILHYGSSYGGNALLGKIAHGLRQAAYDGQASRE
FLAEQFMLLGIIDNETGQRFHVAGGFPSASGKTNLAMTLAPEALGERYRVEFYGDDITWLWIDSQDGRLYGMNPEFGVFG
VAKDTNESTNPTALDSVRPGTGAIFTNVAYNPRTQEVWWEGRTPEPPSDLDGWLDWKGEPIAARAPGDESPWAHPNSRFT
TTLANVPNVAADFEEPRGVPIDAIIFGGRTRDREPLVRAITDLAEGVYDGLTLGAEATFAADGVDGQLRYDPMSMRPFMS
YPEARYAAHWLDVVGRASDQPIFAHVNWFQRDPEDGHFLWPGYRENLRALLWLARLKEGSVTGVQTAVGILPKEDELHLA
DLDLPEADKERILSIDKDRWCQEMGFRETHLAQFDGLPEEIWEAHRRVARDLDC
>Mature_614_residues
MVDVVMDLESVLDAAGLTNPHVREYVARWAAITGAERVEVVDASDDARLVKEALEAGELQPVGDGCYYSRSYSKDTARSE
ERTIVATNDPADKGTYNNWRPAGEMKELLEGLMRGASTGKTMYVIPYLMAPPGSPMERFAAGVQVTDCRPVVLHMIRMSR
VGVHHINDLADPNSFVRAVHVTGDLENLGQGTPDDQRYFVTVADERTILHYGSSYGGNALLGKIAHGLRQAAYDGQASRE
FLAEQFMLLGIIDNETGQRFHVAGGFPSASGKTNLAMTLAPEALGERYRVEFYGDDITWLWIDSQDGRLYGMNPEFGVFG
VAKDTNESTNPTALDSVRPGTGAIFTNVAYNPRTQEVWWEGRTPEPPSDLDGWLDWKGEPIAARAPGDESPWAHPNSRFT
TTLANVPNVAADFEEPRGVPIDAIIFGGRTRDREPLVRAITDLAEGVYDGLTLGAEATFAADGVDGQLRYDPMSMRPFMS
YPEARYAAHWLDVVGRASDQPIFAHVNWFQRDPEDGHFLWPGYRENLRALLWLARLKEGSVTGVQTAVGILPKEDELHLA
DLDLPEADKERILSIDKDRWCQEMGFRETHLAQFDGLPEEIWEAHRRVARDLDC

Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]

COG id: COG1274

COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]

Homologues:

Organism=Homo sapiens, GI66346721, Length=603, Percent_Identity=37.8109452736318, Blast_Score=344, Evalue=2e-94,
Organism=Homo sapiens, GI187281517, Length=590, Percent_Identity=35.9322033898305, Blast_Score=318, Evalue=1e-86,
Organism=Homo sapiens, GI66346723, Length=380, Percent_Identity=36.3157894736842, Blast_Score=191, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17555492, Length=603, Percent_Identity=36.1525704809287, Blast_Score=318, Evalue=4e-87,
Organism=Caenorhabditis elegans, GI71989645, Length=588, Percent_Identity=35.0340136054422, Blast_Score=304, Evalue=1e-82,
Organism=Caenorhabditis elegans, GI71989658, Length=588, Percent_Identity=35.0340136054422, Blast_Score=303, Evalue=2e-82,
Organism=Caenorhabditis elegans, GI71989653, Length=559, Percent_Identity=35.9570661896243, Blast_Score=300, Evalue=1e-81,
Organism=Caenorhabditis elegans, GI32564411, Length=572, Percent_Identity=36.013986013986, Blast_Score=300, Evalue=2e-81,
Organism=Caenorhabditis elegans, GI32564407, Length=494, Percent_Identity=38.8663967611336, Blast_Score=297, Evalue=1e-80,
Organism=Caenorhabditis elegans, GI71989649, Length=500, Percent_Identity=35.8, Blast_Score=251, Evalue=8e-67,
Organism=Caenorhabditis elegans, GI32564409, Length=348, Percent_Identity=40.8045977011494, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24655085, Length=617, Percent_Identity=37.2771474878444, Blast_Score=342, Evalue=4e-94,
Organism=Drosophila melanogaster, GI24655082, Length=623, Percent_Identity=36.5971107544141, Blast_Score=324, Evalue=1e-88,
Organism=Drosophila melanogaster, GI161077226, Length=582, Percent_Identity=37.4570446735395, Blast_Score=308, Evalue=9e-84,
Organism=Drosophila melanogaster, GI24655088, Length=506, Percent_Identity=39.1304347826087, Blast_Score=302, Evalue=4e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018091
- InterPro:   IPR013035
- InterPro:   IPR008209
- InterPro:   IPR008210 [H]

Pfam domain/function: PF00821 PEPCK [H]

EC number: =4.1.1.32 [H]

Molecular weight: Translated: 68145; Mature: 68145

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDVVMDLESVLDAAGLTNPHVREYVARWAAITGAERVEVVDASDDARLVKEALEAGELQ
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCC
PVGDGCYYSRSYSKDTARSEERTIVATNDPADKGTYNNWRPAGEMKELLEGLMRGASTGK
CCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
TMYVIPYLMAPPGSPMERFAAGVQVTDCRPVVLHMIRMSRVGVHHINDLADPNSFVRAVH
EEEEEEEEECCCCCHHHHHHCCCEEECCCHHHHHHHHHHHCCHHHHHHCCCCCHHEEEEE
VTGDLENLGQGTPDDQRYFVTVADERTILHYGSSYGGNALLGKIAHGLRQAAYDGQASRE
EECCHHHHCCCCCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHH
FLAEQFMLLGIIDNETGQRFHVAGGFPSASGKTNLAMTLAPEALGERYRVEFYGDDITWL
HHHHHEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEECHHHHCCEEEEEEECCCEEEE
WIDSQDGRLYGMNPEFGVFGVAKDTNESTNPTALDSVRPGTGAIFTNVAYNPRTQEVWWE
EEECCCCEEEECCCCCCEEEEECCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCEEEEC
GRTPEPPSDLDGWLDWKGEPIAARAPGDESPWAHPNSRFTTTLANVPNVAADFEEPRGVP
CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCC
IDAIIFGGRTRDREPLVRAITDLAEGVYDGLTLGAEATFAADGVDGQLRYDPMSMRPFMS
EEEEEECCCCCCCCHHHHHHHHHHHHHHHCEEECCCCEEEECCCCCEEEECCCCCCCCCC
YPEARYAAHWLDVVGRASDQPIFAHVNWFQRDPEDGHFLWPGYRENLRALLWLARLKEGS
CCHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCEECCCHHHHHHHHHHHHHHCCCC
VTGVQTAVGILPKEDELHLADLDLPEADKERILSIDKDRWCQEMGFRETHLAQFDGLPEE
CCHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCHH
IWEAHRRVARDLDC
HHHHHHHHHHHCCC
>Mature Secondary Structure
MVDVVMDLESVLDAAGLTNPHVREYVARWAAITGAERVEVVDASDDARLVKEALEAGELQ
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCC
PVGDGCYYSRSYSKDTARSEERTIVATNDPADKGTYNNWRPAGEMKELLEGLMRGASTGK
CCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
TMYVIPYLMAPPGSPMERFAAGVQVTDCRPVVLHMIRMSRVGVHHINDLADPNSFVRAVH
EEEEEEEEECCCCCHHHHHHCCCEEECCCHHHHHHHHHHHCCHHHHHHCCCCCHHEEEEE
VTGDLENLGQGTPDDQRYFVTVADERTILHYGSSYGGNALLGKIAHGLRQAAYDGQASRE
EECCHHHHCCCCCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHH
FLAEQFMLLGIIDNETGQRFHVAGGFPSASGKTNLAMTLAPEALGERYRVEFYGDDITWL
HHHHHEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEECHHHHCCEEEEEEECCCEEEE
WIDSQDGRLYGMNPEFGVFGVAKDTNESTNPTALDSVRPGTGAIFTNVAYNPRTQEVWWE
EEECCCCEEEECCCCCCEEEEECCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCEEEEC
GRTPEPPSDLDGWLDWKGEPIAARAPGDESPWAHPNSRFTTTLANVPNVAADFEEPRGVP
CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCC
IDAIIFGGRTRDREPLVRAITDLAEGVYDGLTLGAEATFAADGVDGQLRYDPMSMRPFMS
EEEEEECCCCCCCCHHHHHHHHHHHHHHHCEEECCCCEEEECCCCCEEEECCCCCCCCCC
YPEARYAAHWLDVVGRASDQPIFAHVNWFQRDPEDGHFLWPGYRENLRALLWLARLKEGS
CCHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCEECCCHHHHHHHHHHHHHHCCCC
VTGVQTAVGILPKEDELHLADLDLPEADKERILSIDKDRWCQEMGFRETHLAQFDGLPEE
CCHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCHH
IWEAHRRVARDLDC
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA