| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is pckG [H]
Identifier: 119718387
GI number: 119718387
Start: 4400083
End: 4401927
Strand: Reverse
Name: pckG [H]
Synonym: Noca_4168
Alternate gene names: 119718387
Gene position: 4401927-4400083 (Counterclockwise)
Preceding gene: 119718389
Following gene: 119718386
Centisome position: 88.29
GC content: 71.11
Gene sequence:
>1845_bases GTGGTTGATGTGGTGATGGACCTGGAGAGCGTGCTGGACGCCGCGGGGCTGACGAACCCGCACGTGCGGGAGTACGTCGC CCGCTGGGCCGCGATCACCGGCGCGGAGCGCGTCGAGGTGGTCGACGCGTCCGACGACGCGCGGCTGGTCAAGGAGGCAC TCGAGGCCGGGGAGCTGCAGCCGGTCGGCGACGGCTGCTACTACTCGCGCAGCTACTCCAAGGACACGGCCCGCTCCGAG GAGCGGACGATCGTCGCGACCAACGACCCGGCCGACAAGGGCACCTACAACAACTGGCGGCCCGCCGGGGAGATGAAGGA GCTGCTCGAGGGGCTGATGCGCGGCGCCTCGACCGGCAAGACGATGTACGTGATCCCCTACCTGATGGCGCCTCCCGGCT CCCCGATGGAGCGGTTCGCCGCCGGCGTCCAGGTCACCGACTGCCGGCCGGTGGTGCTGCACATGATCCGGATGTCGCGC GTCGGCGTGCACCACATCAACGACCTCGCGGACCCGAACAGCTTCGTCCGCGCCGTGCACGTCACCGGCGACCTGGAGAA CCTCGGCCAGGGCACGCCCGACGACCAGCGGTACTTCGTGACCGTCGCCGACGAGCGGACCATCCTCCACTACGGCTCGT CGTACGGCGGCAACGCGCTGCTCGGCAAGATCGCCCACGGCCTGCGCCAGGCGGCGTACGACGGCCAGGCGTCCCGGGAG TTCCTCGCCGAGCAGTTCATGCTGCTCGGGATCATCGACAACGAGACCGGCCAGCGCTTCCACGTCGCCGGCGGCTTCCC CAGCGCCTCCGGCAAGACGAACCTCGCGATGACGCTGGCGCCCGAGGCGCTCGGCGAGCGCTACCGCGTGGAGTTCTACG GCGACGACATCACCTGGCTGTGGATCGACTCCCAGGACGGGCGCCTCTACGGCATGAACCCGGAGTTCGGCGTCTTCGGC GTCGCGAAGGACACCAACGAGTCGACCAACCCGACCGCGCTGGACTCGGTGCGGCCCGGCACCGGCGCGATCTTCACCAA CGTCGCCTACAACCCGCGCACCCAGGAGGTGTGGTGGGAGGGGCGCACGCCGGAGCCGCCCTCGGACCTGGACGGCTGGC TGGACTGGAAGGGCGAGCCGATCGCGGCGCGCGCGCCGGGTGACGAGTCGCCGTGGGCGCACCCGAACAGCCGGTTCACC ACGACGCTGGCGAACGTGCCGAACGTCGCCGCCGACTTCGAGGAGCCGCGCGGCGTCCCGATCGATGCGATCATCTTCGG CGGCCGGACCCGCGACCGGGAGCCGCTGGTGCGCGCGATCACCGACCTCGCCGAGGGCGTGTACGACGGCCTCACGCTGG GCGCCGAGGCGACCTTCGCCGCCGACGGGGTGGACGGGCAGCTGCGCTACGACCCGATGTCGATGCGGCCGTTCATGTCC TACCCCGAGGCCCGCTACGCCGCCCACTGGCTCGACGTGGTCGGCCGGGCCAGCGACCAGCCGATCTTCGCGCACGTGAA CTGGTTCCAGCGCGACCCGGAGGACGGCCACTTCCTGTGGCCCGGCTACCGCGAGAACCTGCGCGCGCTGCTATGGCTGG CCCGGCTCAAGGAGGGCTCGGTCACCGGGGTGCAGACCGCGGTCGGCATCCTGCCCAAGGAGGACGAGCTGCACCTCGCC GACCTCGACCTGCCCGAGGCCGACAAGGAGCGGATCCTCTCCATCGACAAGGACCGCTGGTGCCAGGAGATGGGCTTCCG CGAGACCCACCTCGCCCAGTTCGACGGCCTCCCCGAGGAGATCTGGGAGGCCCACCGGCGGGTCGCCCGCGACCTCGACT GCTGA
Upstream 100 bases:
>100_bases ACCTGAAGACTACACAACTTGCACACTTCTTCAAGTCGTGTAGCGTCCCGGGCCATCCGGGATGCGAGCATGGACCCAGT CGAGGACAACGGAGGACCTG
Downstream 100 bases:
>100_bases TCCCCGGTCCGAGAATTTTCGATAGTCCCTGACGGAACTGTGGTGTGGGCACGCTCCCACACCACACAAACGTCAGGGAC TATCGTTCCGGGGTCCTGGG
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MVDVVMDLESVLDAAGLTNPHVREYVARWAAITGAERVEVVDASDDARLVKEALEAGELQPVGDGCYYSRSYSKDTARSE ERTIVATNDPADKGTYNNWRPAGEMKELLEGLMRGASTGKTMYVIPYLMAPPGSPMERFAAGVQVTDCRPVVLHMIRMSR VGVHHINDLADPNSFVRAVHVTGDLENLGQGTPDDQRYFVTVADERTILHYGSSYGGNALLGKIAHGLRQAAYDGQASRE FLAEQFMLLGIIDNETGQRFHVAGGFPSASGKTNLAMTLAPEALGERYRVEFYGDDITWLWIDSQDGRLYGMNPEFGVFG VAKDTNESTNPTALDSVRPGTGAIFTNVAYNPRTQEVWWEGRTPEPPSDLDGWLDWKGEPIAARAPGDESPWAHPNSRFT TTLANVPNVAADFEEPRGVPIDAIIFGGRTRDREPLVRAITDLAEGVYDGLTLGAEATFAADGVDGQLRYDPMSMRPFMS YPEARYAAHWLDVVGRASDQPIFAHVNWFQRDPEDGHFLWPGYRENLRALLWLARLKEGSVTGVQTAVGILPKEDELHLA DLDLPEADKERILSIDKDRWCQEMGFRETHLAQFDGLPEEIWEAHRRVARDLDC
Sequences:
>Translated_614_residues MVDVVMDLESVLDAAGLTNPHVREYVARWAAITGAERVEVVDASDDARLVKEALEAGELQPVGDGCYYSRSYSKDTARSE ERTIVATNDPADKGTYNNWRPAGEMKELLEGLMRGASTGKTMYVIPYLMAPPGSPMERFAAGVQVTDCRPVVLHMIRMSR VGVHHINDLADPNSFVRAVHVTGDLENLGQGTPDDQRYFVTVADERTILHYGSSYGGNALLGKIAHGLRQAAYDGQASRE FLAEQFMLLGIIDNETGQRFHVAGGFPSASGKTNLAMTLAPEALGERYRVEFYGDDITWLWIDSQDGRLYGMNPEFGVFG VAKDTNESTNPTALDSVRPGTGAIFTNVAYNPRTQEVWWEGRTPEPPSDLDGWLDWKGEPIAARAPGDESPWAHPNSRFT TTLANVPNVAADFEEPRGVPIDAIIFGGRTRDREPLVRAITDLAEGVYDGLTLGAEATFAADGVDGQLRYDPMSMRPFMS YPEARYAAHWLDVVGRASDQPIFAHVNWFQRDPEDGHFLWPGYRENLRALLWLARLKEGSVTGVQTAVGILPKEDELHLA DLDLPEADKERILSIDKDRWCQEMGFRETHLAQFDGLPEEIWEAHRRVARDLDC >Mature_614_residues MVDVVMDLESVLDAAGLTNPHVREYVARWAAITGAERVEVVDASDDARLVKEALEAGELQPVGDGCYYSRSYSKDTARSE ERTIVATNDPADKGTYNNWRPAGEMKELLEGLMRGASTGKTMYVIPYLMAPPGSPMERFAAGVQVTDCRPVVLHMIRMSR VGVHHINDLADPNSFVRAVHVTGDLENLGQGTPDDQRYFVTVADERTILHYGSSYGGNALLGKIAHGLRQAAYDGQASRE FLAEQFMLLGIIDNETGQRFHVAGGFPSASGKTNLAMTLAPEALGERYRVEFYGDDITWLWIDSQDGRLYGMNPEFGVFG VAKDTNESTNPTALDSVRPGTGAIFTNVAYNPRTQEVWWEGRTPEPPSDLDGWLDWKGEPIAARAPGDESPWAHPNSRFT TTLANVPNVAADFEEPRGVPIDAIIFGGRTRDREPLVRAITDLAEGVYDGLTLGAEATFAADGVDGQLRYDPMSMRPFMS YPEARYAAHWLDVVGRASDQPIFAHVNWFQRDPEDGHFLWPGYRENLRALLWLARLKEGSVTGVQTAVGILPKEDELHLA DLDLPEADKERILSIDKDRWCQEMGFRETHLAQFDGLPEEIWEAHRRVARDLDC
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI66346721, Length=603, Percent_Identity=37.8109452736318, Blast_Score=344, Evalue=2e-94, Organism=Homo sapiens, GI187281517, Length=590, Percent_Identity=35.9322033898305, Blast_Score=318, Evalue=1e-86, Organism=Homo sapiens, GI66346723, Length=380, Percent_Identity=36.3157894736842, Blast_Score=191, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17555492, Length=603, Percent_Identity=36.1525704809287, Blast_Score=318, Evalue=4e-87, Organism=Caenorhabditis elegans, GI71989645, Length=588, Percent_Identity=35.0340136054422, Blast_Score=304, Evalue=1e-82, Organism=Caenorhabditis elegans, GI71989658, Length=588, Percent_Identity=35.0340136054422, Blast_Score=303, Evalue=2e-82, Organism=Caenorhabditis elegans, GI71989653, Length=559, Percent_Identity=35.9570661896243, Blast_Score=300, Evalue=1e-81, Organism=Caenorhabditis elegans, GI32564411, Length=572, Percent_Identity=36.013986013986, Blast_Score=300, Evalue=2e-81, Organism=Caenorhabditis elegans, GI32564407, Length=494, Percent_Identity=38.8663967611336, Blast_Score=297, Evalue=1e-80, Organism=Caenorhabditis elegans, GI71989649, Length=500, Percent_Identity=35.8, Blast_Score=251, Evalue=8e-67, Organism=Caenorhabditis elegans, GI32564409, Length=348, Percent_Identity=40.8045977011494, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24655085, Length=617, Percent_Identity=37.2771474878444, Blast_Score=342, Evalue=4e-94, Organism=Drosophila melanogaster, GI24655082, Length=623, Percent_Identity=36.5971107544141, Blast_Score=324, Evalue=1e-88, Organism=Drosophila melanogaster, GI161077226, Length=582, Percent_Identity=37.4570446735395, Blast_Score=308, Evalue=9e-84, Organism=Drosophila melanogaster, GI24655088, Length=506, Percent_Identity=39.1304347826087, Blast_Score=302, Evalue=4e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 68145; Mature: 68145
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDVVMDLESVLDAAGLTNPHVREYVARWAAITGAERVEVVDASDDARLVKEALEAGELQ CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCC PVGDGCYYSRSYSKDTARSEERTIVATNDPADKGTYNNWRPAGEMKELLEGLMRGASTGK CCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC TMYVIPYLMAPPGSPMERFAAGVQVTDCRPVVLHMIRMSRVGVHHINDLADPNSFVRAVH EEEEEEEEECCCCCHHHHHHCCCEEECCCHHHHHHHHHHHCCHHHHHHCCCCCHHEEEEE VTGDLENLGQGTPDDQRYFVTVADERTILHYGSSYGGNALLGKIAHGLRQAAYDGQASRE EECCHHHHCCCCCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHH FLAEQFMLLGIIDNETGQRFHVAGGFPSASGKTNLAMTLAPEALGERYRVEFYGDDITWL HHHHHEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEECHHHHCCEEEEEEECCCEEEE WIDSQDGRLYGMNPEFGVFGVAKDTNESTNPTALDSVRPGTGAIFTNVAYNPRTQEVWWE EEECCCCEEEECCCCCCEEEEECCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCEEEEC GRTPEPPSDLDGWLDWKGEPIAARAPGDESPWAHPNSRFTTTLANVPNVAADFEEPRGVP CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCC IDAIIFGGRTRDREPLVRAITDLAEGVYDGLTLGAEATFAADGVDGQLRYDPMSMRPFMS EEEEEECCCCCCCCHHHHHHHHHHHHHHHCEEECCCCEEEECCCCCEEEECCCCCCCCCC YPEARYAAHWLDVVGRASDQPIFAHVNWFQRDPEDGHFLWPGYRENLRALLWLARLKEGS CCHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCEECCCHHHHHHHHHHHHHHCCCC VTGVQTAVGILPKEDELHLADLDLPEADKERILSIDKDRWCQEMGFRETHLAQFDGLPEE CCHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCHH IWEAHRRVARDLDC HHHHHHHHHHHCCC >Mature Secondary Structure MVDVVMDLESVLDAAGLTNPHVREYVARWAAITGAERVEVVDASDDARLVKEALEAGELQ CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCC PVGDGCYYSRSYSKDTARSEERTIVATNDPADKGTYNNWRPAGEMKELLEGLMRGASTGK CCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC TMYVIPYLMAPPGSPMERFAAGVQVTDCRPVVLHMIRMSRVGVHHINDLADPNSFVRAVH EEEEEEEEECCCCCHHHHHHCCCEEECCCHHHHHHHHHHHCCHHHHHHCCCCCHHEEEEE VTGDLENLGQGTPDDQRYFVTVADERTILHYGSSYGGNALLGKIAHGLRQAAYDGQASRE EECCHHHHCCCCCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHH FLAEQFMLLGIIDNETGQRFHVAGGFPSASGKTNLAMTLAPEALGERYRVEFYGDDITWL HHHHHEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEECHHHHCCEEEEEEECCCEEEE WIDSQDGRLYGMNPEFGVFGVAKDTNESTNPTALDSVRPGTGAIFTNVAYNPRTQEVWWE EEECCCCEEEECCCCCCEEEEECCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCEEEEC GRTPEPPSDLDGWLDWKGEPIAARAPGDESPWAHPNSRFTTTLANVPNVAADFEEPRGVP CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCC IDAIIFGGRTRDREPLVRAITDLAEGVYDGLTLGAEATFAADGVDGQLRYDPMSMRPFMS EEEEEECCCCCCCCHHHHHHHHHHHHHHHCEEECCCCEEEECCCCCEEEECCCCCCCCCC YPEARYAAHWLDVVGRASDQPIFAHVNWFQRDPEDGHFLWPGYRENLRALLWLARLKEGS CCHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCEECCCHHHHHHHHHHHHHHCCCC VTGVQTAVGILPKEDELHLADLDLPEADKERILSIDKDRWCQEMGFRETHLAQFDGLPEE CCHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCHH IWEAHRRVARDLDC HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA