Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718385

Identifier: 119718385

GI number: 119718385

Start: 4398409

End: 4399623

Strand: Reverse

Name: 119718385

Synonym: Noca_4166

Alternate gene names: NA

Gene position: 4399623-4398409 (Counterclockwise)

Preceding gene: 119718386

Following gene: 119718384

Centisome position: 88.24

GC content: 78.44

Gene sequence:

>1215_bases
GTGAGCGACGTCCTCGACACCCGCGTGTACGGCGACCCCGCGGCCTGCTCGGCCGCGGCCGGCGCCGTCGGCGGGGTGCG
GAGGGCGGTGGCGGACGCCGAGTCCGCGGCCGGCAAGGCCCGCTCGCTGGCGAGCTCGTGGCGCGGCCAGGCGGGCGCCG
CGTTCGAGGCCCGGGTCGACGCGACCATCACGGACCTGGCCGGGCTCGGCGAGCGGCTCGAGGCGATGCGGTCCGCGCTG
GGCGACTTCGCCGGCGAGCTCACCGTCGTTCGGGACCGGATGGCCCACGCCCGGGCCGTGGCCGCCGCGGGCGGCGTGAG
CGTCACCGGCACCGACGTACACCGCCCGGTCGCGCCGGAGGTCATGAGCCAGGGCCAGGCCGACGCGTTCACCACCCGGG
CCGAGGCCTGGAACGAGGCGGTCGGCATCGCCGAGGCGGCGCGCACCAAGGAGACCGAGGCGCACGACCACCTGCGCGAC
GGCCTGGACCGGACGACCGGCGACGGCTTCCTCGAGGACCTGCTCGAGCGGCTCGGCCTGCTGCCCGCCGACTTCGCCGA
CGGCGACGACATCGGGGCCTACCTGCTCGGCCTGGGCGGCCTCGGGTTCGGCGCGGCGACCGGCTACCTGGTCTCCAGCC
GCTACGGGATCTTCCAGCCGCGGGTCGCGGGCCGGTTCGCGAGCCCCGCCGGGCTCGACTTCTGGGGCCGGCTGCGGGCC
GGCGCGTCCGGCGACAGCTTCCACGCCCGCCCCTACACCGCGGGCGCGCGGGACTGGTGGGGCCGGGCCGGCAAGGTCGG
CGGGTACGCCGGCACCGCGCTCACCGGCGGCTTCGCGGCCTGGAACCAGTGGCAGGCCGACGCCGACGACCCGTCGCTGA
GCGACGCGAACAAGGCCGGCCGCGCCGGCGCGATGGGTGTGTCCACCGCCGCGGGCGCCTGGGCGGGCGCCGAGGCCGGC
GCCTGGGCCGGCGGCGCGATCGGCACCGCGATCTGCCCCGGCATCGGCACCGCCATCGGCGGCGTCGCCGGCGGCCTGGT
CGGTGGCGCGGTCGGCGGGTTCGTCGGCAGCGAGGTCGGCCAGGAGGTGATGGGCGCGGTCGGCGACGCCACCGAGGCCA
CCGTCGACTGGGTCGGCGACGCCGCGGGCGACGTGGGCGACTGGGCCGGCGACACCGGCGGCGACGTCGTCGACGCCGTC
ACGTTCTGGGACTGA

Upstream 100 bases:

>100_bases
CCAGGACCGGTGCGGCGAGCGGCCTGCTCACCGGCACCGACGACCTGATCGGCGCCCGGCTCGACTCCCACCTCGACGGC
GGCACGGGGCCGGTCGGGCC

Downstream 100 bases:

>100_bases
GGAGGAGTGCACGTGGTGACGCCGGTGCTGATGCTGCTCGCCGGGGTGGGCCTGGCCGCCTGGAACCTCTGGCAGCGGCG
CGGCCGCACCCCGGCCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MSDVLDTRVYGDPAACSAAAGAVGGVRRAVADAESAAGKARSLASSWRGQAGAAFEARVDATITDLAGLGERLEAMRSAL
GDFAGELTVVRDRMAHARAVAAAGGVSVTGTDVHRPVAPEVMSQGQADAFTTRAEAWNEAVGIAEAARTKETEAHDHLRD
GLDRTTGDGFLEDLLERLGLLPADFADGDDIGAYLLGLGGLGFGAATGYLVSSRYGIFQPRVAGRFASPAGLDFWGRLRA
GASGDSFHARPYTAGARDWWGRAGKVGGYAGTALTGGFAAWNQWQADADDPSLSDANKAGRAGAMGVSTAAGAWAGAEAG
AWAGGAIGTAICPGIGTAIGGVAGGLVGGAVGGFVGSEVGQEVMGAVGDATEATVDWVGDAAGDVGDWAGDTGGDVVDAV
TFWD

Sequences:

>Translated_404_residues
MSDVLDTRVYGDPAACSAAAGAVGGVRRAVADAESAAGKARSLASSWRGQAGAAFEARVDATITDLAGLGERLEAMRSAL
GDFAGELTVVRDRMAHARAVAAAGGVSVTGTDVHRPVAPEVMSQGQADAFTTRAEAWNEAVGIAEAARTKETEAHDHLRD
GLDRTTGDGFLEDLLERLGLLPADFADGDDIGAYLLGLGGLGFGAATGYLVSSRYGIFQPRVAGRFASPAGLDFWGRLRA
GASGDSFHARPYTAGARDWWGRAGKVGGYAGTALTGGFAAWNQWQADADDPSLSDANKAGRAGAMGVSTAAGAWAGAEAG
AWAGGAIGTAICPGIGTAIGGVAGGLVGGAVGGFVGSEVGQEVMGAVGDATEATVDWVGDAAGDVGDWAGDTGGDVVDAV
TFWD
>Mature_403_residues
SDVLDTRVYGDPAACSAAAGAVGGVRRAVADAESAAGKARSLASSWRGQAGAAFEARVDATITDLAGLGERLEAMRSALG
DFAGELTVVRDRMAHARAVAAAGGVSVTGTDVHRPVAPEVMSQGQADAFTTRAEAWNEAVGIAEAARTKETEAHDHLRDG
LDRTTGDGFLEDLLERLGLLPADFADGDDIGAYLLGLGGLGFGAATGYLVSSRYGIFQPRVAGRFASPAGLDFWGRLRAG
ASGDSFHARPYTAGARDWWGRAGKVGGYAGTALTGGFAAWNQWQADADDPSLSDANKAGRAGAMGVSTAAGAWAGAEAGA
WAGGAIGTAICPGIGTAIGGVAGGLVGGAVGGFVGSEVGQEVMGAVGDATEATVDWVGDAAGDVGDWAGDTGGDVVDAVT
FWD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40413; Mature: 40281

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVLDTRVYGDPAACSAAAGAVGGVRRAVADAESAAGKARSLASSWRGQAGAAFEARVD
CCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCC
ATITDLAGLGERLEAMRSALGDFAGELTVVRDRMAHARAVAAAGGVSVTGTDVHRPVAPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHH
VMSQGQADAFTTRAEAWNEAVGIAEAARTKETEAHDHLRDGLDRTTGDGFLEDLLERLGL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
LPADFADGDDIGAYLLGLGGLGFGAATGYLVSSRYGIFQPRVAGRFASPAGLDFWGRLRA
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHC
GASGDSFHARPYTAGARDWWGRAGKVGGYAGTALTGGFAAWNQWQADADDPSLSDANKAG
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCHHHCC
RAGAMGVSTAAGAWAGAEAGAWAGGAIGTAICPGIGTAIGGVAGGLVGGAVGGFVGSEVG
CCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEVMGAVGDATEATVDWVGDAAGDVGDWAGDTGGDVVDAVTFWD
HHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
SDVLDTRVYGDPAACSAAAGAVGGVRRAVADAESAAGKARSLASSWRGQAGAAFEARVD
CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCC
ATITDLAGLGERLEAMRSALGDFAGELTVVRDRMAHARAVAAAGGVSVTGTDVHRPVAPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHH
VMSQGQADAFTTRAEAWNEAVGIAEAARTKETEAHDHLRDGLDRTTGDGFLEDLLERLGL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
LPADFADGDDIGAYLLGLGGLGFGAATGYLVSSRYGIFQPRVAGRFASPAGLDFWGRLRA
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHC
GASGDSFHARPYTAGARDWWGRAGKVGGYAGTALTGGFAAWNQWQADADDPSLSDANKAG
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCHHHCC
RAGAMGVSTAAGAWAGAEAGAWAGGAIGTAICPGIGTAIGGVAGGLVGGAVGGFVGSEVG
CCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEVMGAVGDATEATVDWVGDAAGDVGDWAGDTGGDVVDAVTFWD
HHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA