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The map label for this gene is yufP [H]

Identifier: 119718365

GI number: 119718365

Start: 4379574

End: 4380674

Strand: Reverse

Name: yufP [H]

Synonym: Noca_4146

Alternate gene names: 119718365

Gene position: 4380674-4379574 (Counterclockwise)

Preceding gene: 119718366

Following gene: 119718364

Centisome position: 87.86

GC content: 72.66

Gene sequence:

>1101_bases
ATGAGGCTGGTCCTGCGTGGGCGCGAGCCGCGGTGGCTCCCACCCGTCGCGGTCGCGGTCGGCGTCCTGATCACCGTTGC
ACTGACCGCGATCCCGATCCGGCTGTCCGACGCGAATCCGCCGGCCGCCTTCGAGCGGTACCTCGTCACTCCGCTGACCT
CGACCACCGGGCTGTACGAGGTGCTGCTCACCGCCACCCCGCTGTTGTTCACGGGCGTCGCGGTCGCGCTCGCGTTCCGA
GCCGGGTACTGGAACATCGGTGCCGAAGGGCAGTTCCTCCTCGGCGCGATCGGAACCACCGCGATCGGCACCGGCTTGCC
CGACCTGCCCGCCGCGGTGGCGCTGCCGCTGGGCTTCGCCGCCGGGGCCGCAGGGGGGCTCGTGTGGGCCGTGGTGCCCG
CCTGGCTCAAGCGGCGGGCCGGGATCGACGAGGTCGTCACCACGCTGTTGCTCAACCCGGTCGCGCTGCTCCTGGTCCAG
GGGCTGCTCAACGGGCCGTGGCGCAACTCCGAGAGCGGGTTCACCGACTCCGACCGGCTCGGCCCGTCCTACGACCTGCC
CGCGCTGGTTCCCGGAAGCCGGCTGCACTGGGGCTTCGGGGTCGCCGTACTGGTCGTCGTGGCGGTGGGGATCGTGCTGA
CCCGCACCGCCACCGGGATCCGGATCCGGGCAGCCGGCCAGGCTCCCCGGGCCGCGGAGTTCAGCGGGATCGCGGTCGGT
CGCCTGCAGTTCCGGTGCGCGCTCGTGTCCGGCGGCATCGCCGGGATCGGCGGCGCGTCGCAGGTGATGGGCGTCCAGCA
CCAGTTGACCGGGGGCATCAGCAACAGCTACGGCTACACGGGTGTCATCGTCGCCACCCTCGGCGGCCTCGGTGCACTCG
GGGTGTTCCTGGTCGCGTTCCTGCTCGGCGACCTGTCCGTGGGCGCGCAGAACGTGTCGCTGGTGCTGCAGGTGCCCGCC
CAGCTCGGCGCGATGTTCAGCGCGCTGTTGCTGCTGGCGGTGCTGTCGGCGATGACCTGGCGCCGCTACCGGGTCCAGTG
GCGTGGGTCGGCGACACCGCCCGCTCCGGCACGCACTCCGGAACGGGAGTCGGCCCGATGA

Upstream 100 bases:

>100_bases
GGATGGTGGTGCTGCTGCGGGGCGAGGTCGTCGGTGAGGTGGCCTCGGCGGACGCTTCGGCGGAGCGGGTAGGCGTGATG
ATGGCGGGAGGGATCCCGGC

Downstream 100 bases:

>100_bases
GCCTCAACGTCTTGGCCCTGATCGGGGCCATGCTCACCATCGCGACGCCGCTCGTCTGGGCCGGCATCGGCGAGGTCATC
GTCGAGCGCAGCGGCGTCCT

Product: inner-membrane translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MRLVLRGREPRWLPPVAVAVGVLITVALTAIPIRLSDANPPAAFERYLVTPLTSTTGLYEVLLTATPLLFTGVAVALAFR
AGYWNIGAEGQFLLGAIGTTAIGTGLPDLPAAVALPLGFAAGAAGGLVWAVVPAWLKRRAGIDEVVTTLLLNPVALLLVQ
GLLNGPWRNSESGFTDSDRLGPSYDLPALVPGSRLHWGFGVAVLVVVAVGIVLTRTATGIRIRAAGQAPRAAEFSGIAVG
RLQFRCALVSGGIAGIGGASQVMGVQHQLTGGISNSYGYTGVIVATLGGLGALGVFLVAFLLGDLSVGAQNVSLVLQVPA
QLGAMFSALLLLAVLSAMTWRRYRVQWRGSATPPAPARTPERESAR

Sequences:

>Translated_366_residues
MRLVLRGREPRWLPPVAVAVGVLITVALTAIPIRLSDANPPAAFERYLVTPLTSTTGLYEVLLTATPLLFTGVAVALAFR
AGYWNIGAEGQFLLGAIGTTAIGTGLPDLPAAVALPLGFAAGAAGGLVWAVVPAWLKRRAGIDEVVTTLLLNPVALLLVQ
GLLNGPWRNSESGFTDSDRLGPSYDLPALVPGSRLHWGFGVAVLVVVAVGIVLTRTATGIRIRAAGQAPRAAEFSGIAVG
RLQFRCALVSGGIAGIGGASQVMGVQHQLTGGISNSYGYTGVIVATLGGLGALGVFLVAFLLGDLSVGAQNVSLVLQVPA
QLGAMFSALLLLAVLSAMTWRRYRVQWRGSATPPAPARTPERESAR
>Mature_366_residues
MRLVLRGREPRWLPPVAVAVGVLITVALTAIPIRLSDANPPAAFERYLVTPLTSTTGLYEVLLTATPLLFTGVAVALAFR
AGYWNIGAEGQFLLGAIGTTAIGTGLPDLPAAVALPLGFAAGAAGGLVWAVVPAWLKRRAGIDEVVTTLLLNPVALLLVQ
GLLNGPWRNSESGFTDSDRLGPSYDLPALVPGSRLHWGFGVAVLVVVAVGIVLTRTATGIRIRAAGQAPRAAEFSGIAVG
RLQFRCALVSGGIAGIGGASQVMGVQHQLTGGISNSYGYTGVIVATLGGLGALGVFLVAFLLGDLSVGAQNVSLVLQVPA
QLGAMFSALLLLAVLSAMTWRRYRVQWRGSATPPAPARTPERESAR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 37849; Mature: 37849

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVLRGREPRWLPPVAVAVGVLITVALTAIPIRLSDANPPAAFERYLVTPLTSTTGLYE
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCHHHHHH
VLLTATPLLFTGVAVALAFRAGYWNIGAEGQFLLGAIGTTAIGTGLPDLPAAVALPLGFA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCHHHHHHHHHH
AGAAGGLVWAVVPAWLKRRAGIDEVVTTLLLNPVALLLVQGLLNGPWRNSESGFTDSDRL
HCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GPSYDLPALVPGSRLHWGFGVAVLVVVAVGIVLTRTATGIRIRAAGQAPRAAEFSGIAVG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEE
RLQFRCALVSGGIAGIGGASQVMGVQHQLTGGISNSYGYTGVIVATLGGLGALGVFLVAF
HHEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
LLGDLSVGAQNVSLVLQVPAQLGAMFSALLLLAVLSAMTWRRYRVQWRGSATPPAPARTP
HHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCC
ERESAR
CCCCCC
>Mature Secondary Structure
MRLVLRGREPRWLPPVAVAVGVLITVALTAIPIRLSDANPPAAFERYLVTPLTSTTGLYE
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCHHHHHH
VLLTATPLLFTGVAVALAFRAGYWNIGAEGQFLLGAIGTTAIGTGLPDLPAAVALPLGFA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCHHHHHHHHHH
AGAAGGLVWAVVPAWLKRRAGIDEVVTTLLLNPVALLLVQGLLNGPWRNSESGFTDSDRL
HCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GPSYDLPALVPGSRLHWGFGVAVLVVVAVGIVLTRTATGIRIRAAGQAPRAAEFSGIAVG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEE
RLQFRCALVSGGIAGIGGASQVMGVQHQLTGGISNSYGYTGVIVATLGGLGALGVFLVAF
HHEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
LLGDLSVGAQNVSLVLQVPAQLGAMFSALLLLAVLSAMTWRRYRVQWRGSATPPAPARTP
HHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCC
ERESAR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]