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The map label for this gene is bbsG [H]

Identifier: 119718349

GI number: 119718349

Start: 4361843

End: 4363156

Strand: Reverse

Name: bbsG [H]

Synonym: Noca_4130

Alternate gene names: 119718349

Gene position: 4363156-4361843 (Counterclockwise)

Preceding gene: 119718350

Following gene: 119718348

Centisome position: 87.51

GC content: 70.4

Gene sequence:

>1314_bases
GTGTGGAGCTTCGAGACCGATGAGGACTACCAGAAGCAGCTGGACTGGGTGGACGAGTTCGTCCGCGCGGAGGTCGAGCC
CGTCGACCATGTCATCGAGCACGCCTGGGACGTGCGCGACCCGCTGCGCAACCGGCTGATCAAGCCGCTCCAGGAGCAGG
TCCGCGACCAGGAGCTGTGGGCCTGCCACCTCGGCCCCGAGCTCGGGGGACCGGGCTACGGCCAGCTCAAGCTGGCGCTG
CTCAACGAGATCCTCGGCCGCAGCCACAGTGCCCCGGTCGTCTTCGGCTGCCACGCCCCCGACTCCGGCAATGCCGAGAT
CCTCGCGCACTACGGCACCCCGGAGCTCAAGGAGCGCTACCTCGAGCCCCTGCTGGCCAACGACATCGTGTCCTGCTACT
CGATGACCGAGCCCACCGGCGGCTCGGACCCGACGGCGTTCGTGACCCGCGCCGAGCTGGACGGCGACGAGTGGGTGATC
AACGGCGAGAAGTGGTTCTCCTCGCACGCGAGCTTCGCGTCGTTCTTCATCACCATGGCCGTCACCGACCCGGACGCGGA
CCGGCACGGGCGGGCATCGATGTTCGTCGTCCCCGCCGACACCCCGGGCATCACGATCGTGCGCGACGTGGGGGTCTGGG
GCCACGACGAGGACGAGGGCCACCACACCTACCTGCGCTACGAGGACGTGCGCATCCCGCGGGACCACCTGCTCGGCGAA
CGTGGCCGGGGCTTCGCGGTCGCGCAGACCCGGCTCGGCGGCGGCCGCATCCACCACGCGATGCGCACGGTCGGGCTGGT
GCGGTCCTCGCTCGACATGATGCTCGAGCGCGCCGTCTCCCGACGCAGCGGCACCGGCACCCTCGCCGACCGCCAGCTCG
TGCAGGAGATGATCGCCGACTCCTGGATCCAGCTCGAGCAGTTCCGCCTGCTGGTGCTGCAGACCGCCTGGAAGATCGAC
CGCTACCAGGACTACCGGGCCGTCATCGCCGACATCAGCGCGGTCAAGGCCGCCATGCCGAAGGTGCTGCTCGACGTCGC
GGGCCGGGCCATCCAGCTGCACGGCTCGCTCGGCATCTCGACCGAGATGCCGTTCGGCAAGTGGGTGCTGGAGAGCTACC
ACATGGGCCTCGCCGACGGCGCGACCGAGCTGCACAAGGTCGCGGTCGCCAAGCAGCTGCTCAAGGGCGTCGCGCCGACC
CCCGGGCTGTTCCCCACCGGGCACCTGATCGCGGCGAAGGAAGCCGCCCGTGCCCGCTTCGCGACCGAGCTGGCCGAGCT
GGCGGAGCTCGACGAGCAGGTCCCGACGCCGTGA

Upstream 100 bases:

>100_bases
GGTGTACGGCGCTCCCGGCATCTCCGCATGCACCGTGCTCACGCGCTGATCCCTGAACCCACCGACGGCGTCGCCGTCAC
GAACCGAGGAGGCCACCGAC

Downstream 100 bases:

>100_bases
GGAGCGTGACGGAGGCCACCGACCACCCCGAGCTCGCGCCCGTGCGCGCGGGGGAGGACCTCGACTGGGCGGCCCTGGCG
GCGCACCTGCGCGCCCAGCT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MWSFETDEDYQKQLDWVDEFVRAEVEPVDHVIEHAWDVRDPLRNRLIKPLQEQVRDQELWACHLGPELGGPGYGQLKLAL
LNEILGRSHSAPVVFGCHAPDSGNAEILAHYGTPELKERYLEPLLANDIVSCYSMTEPTGGSDPTAFVTRAELDGDEWVI
NGEKWFSSHASFASFFITMAVTDPDADRHGRASMFVVPADTPGITIVRDVGVWGHDEDEGHHTYLRYEDVRIPRDHLLGE
RGRGFAVAQTRLGGGRIHHAMRTVGLVRSSLDMMLERAVSRRSGTGTLADRQLVQEMIADSWIQLEQFRLLVLQTAWKID
RYQDYRAVIADISAVKAAMPKVLLDVAGRAIQLHGSLGISTEMPFGKWVLESYHMGLADGATELHKVAVAKQLLKGVAPT
PGLFPTGHLIAAKEAARARFATELAELAELDEQVPTP

Sequences:

>Translated_437_residues
MWSFETDEDYQKQLDWVDEFVRAEVEPVDHVIEHAWDVRDPLRNRLIKPLQEQVRDQELWACHLGPELGGPGYGQLKLAL
LNEILGRSHSAPVVFGCHAPDSGNAEILAHYGTPELKERYLEPLLANDIVSCYSMTEPTGGSDPTAFVTRAELDGDEWVI
NGEKWFSSHASFASFFITMAVTDPDADRHGRASMFVVPADTPGITIVRDVGVWGHDEDEGHHTYLRYEDVRIPRDHLLGE
RGRGFAVAQTRLGGGRIHHAMRTVGLVRSSLDMMLERAVSRRSGTGTLADRQLVQEMIADSWIQLEQFRLLVLQTAWKID
RYQDYRAVIADISAVKAAMPKVLLDVAGRAIQLHGSLGISTEMPFGKWVLESYHMGLADGATELHKVAVAKQLLKGVAPT
PGLFPTGHLIAAKEAARARFATELAELAELDEQVPTP
>Mature_437_residues
MWSFETDEDYQKQLDWVDEFVRAEVEPVDHVIEHAWDVRDPLRNRLIKPLQEQVRDQELWACHLGPELGGPGYGQLKLAL
LNEILGRSHSAPVVFGCHAPDSGNAEILAHYGTPELKERYLEPLLANDIVSCYSMTEPTGGSDPTAFVTRAELDGDEWVI
NGEKWFSSHASFASFFITMAVTDPDADRHGRASMFVVPADTPGITIVRDVGVWGHDEDEGHHTYLRYEDVRIPRDHLLGE
RGRGFAVAQTRLGGGRIHHAMRTVGLVRSSLDMMLERAVSRRSGTGTLADRQLVQEMIADSWIQLEQFRLLVLQTAWKID
RYQDYRAVIADISAVKAAMPKVLLDVAGRAIQLHGSLGISTEMPFGKWVLESYHMGLADGATELHKVAVAKQLLKGVAPT
PGLFPTGHLIAAKEAARARFATELAELAELDEQVPTP

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI38505218, Length=395, Percent_Identity=35.4430379746835, Blast_Score=228, Evalue=7e-60,
Organism=Homo sapiens, GI211971008, Length=358, Percent_Identity=37.9888268156425, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI48976061, Length=358, Percent_Identity=37.9888268156425, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI4557233, Length=399, Percent_Identity=29.3233082706767, Blast_Score=153, Evalue=2e-37,
Organism=Homo sapiens, GI187960098, Length=403, Percent_Identity=28.0397022332506, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI4557231, Length=403, Percent_Identity=28.0397022332506, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI4501859, Length=388, Percent_Identity=26.8041237113402, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI21361497, Length=406, Percent_Identity=25.615763546798, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI7656849, Length=333, Percent_Identity=23.7237237237237, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI226958412, Length=394, Percent_Identity=24.8730964467005, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI226958414, Length=360, Percent_Identity=25.8333333333333, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI76496475, Length=367, Percent_Identity=27.2479564032698, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI4557235, Length=368, Percent_Identity=26.9021739130435, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI4501857, Length=387, Percent_Identity=26.0981912144703, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI4503943, Length=407, Percent_Identity=22.1130221130221, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI7669494, Length=376, Percent_Identity=23.4042553191489, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI87081958, Length=291, Percent_Identity=24.0549828178694, Blast_Score=79, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17562446, Length=402, Percent_Identity=32.8358208955224, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17534899, Length=392, Percent_Identity=30.6122448979592, Blast_Score=147, Evalue=7e-36,
Organism=Caenorhabditis elegans, GI17569725, Length=332, Percent_Identity=30.7228915662651, Blast_Score=144, Evalue=8e-35,
Organism=Caenorhabditis elegans, GI17570075, Length=425, Percent_Identity=26.8235294117647, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI71982178, Length=290, Percent_Identity=28.9655172413793, Blast_Score=118, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17506239, Length=395, Percent_Identity=25.3164556962025, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71985184, Length=407, Percent_Identity=26.7813267813268, Blast_Score=111, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=387, Percent_Identity=23.7726098191214, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17538396, Length=386, Percent_Identity=24.0932642487047, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17533517, Length=393, Percent_Identity=24.1730279898219, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI71985192, Length=298, Percent_Identity=28.8590604026846, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17505929, Length=341, Percent_Identity=25.8064516129032, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71990804, Length=214, Percent_Identity=30.3738317757009, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17551932, Length=266, Percent_Identity=28.9473684210526, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI32563615, Length=239, Percent_Identity=27.1966527196653, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24660351, Length=399, Percent_Identity=28.5714285714286, Blast_Score=148, Evalue=7e-36,
Organism=Drosophila melanogaster, GI21356377, Length=337, Percent_Identity=29.9703264094956, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24646207, Length=350, Percent_Identity=28.5714285714286, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI21355753, Length=398, Percent_Identity=27.6381909547739, Blast_Score=125, Evalue=8e-29,
Organism=Drosophila melanogaster, GI24666513, Length=402, Percent_Identity=24.3781094527363, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281363737, Length=358, Percent_Identity=25.9776536312849, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI19920834, Length=287, Percent_Identity=23.6933797909408, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 48579; Mature: 48579

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSFETDEDYQKQLDWVDEFVRAEVEPVDHVIEHAWDVRDPLRNRLIKPLQEQVRDQELW
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHE
ACHLGPELGGPGYGQLKLALLNEILGRSHSAPVVFGCHAPDSGNAEILAHYGTPELKERY
EEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHH
LEPLLANDIVSCYSMTEPTGGSDPTAFVTRAELDGDEWVINGEKWFSSHASFASFFITMA
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHEEEEEE
VTDPDADRHGRASMFVVPADTPGITIVRDVGVWGHDEDEGHHTYLRYEDVRIPRDHLLGE
EECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHCCC
RGRGFAVAQTRLGGGRIHHAMRTVGLVRSSLDMMLERAVSRRSGTGTLADRQLVQEMIAD
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SWIQLEQFRLLVLQTAWKIDRYQDYRAVIADISAVKAAMPKVLLDVAGRAIQLHGSLGIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
TEMPFGKWVLESYHMGLADGATELHKVAVAKQLLKGVAPTPGLFPTGHLIAAKEAARARF
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHH
ATELAELAELDEQVPTP
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MWSFETDEDYQKQLDWVDEFVRAEVEPVDHVIEHAWDVRDPLRNRLIKPLQEQVRDQELW
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHE
ACHLGPELGGPGYGQLKLALLNEILGRSHSAPVVFGCHAPDSGNAEILAHYGTPELKERY
EEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHH
LEPLLANDIVSCYSMTEPTGGSDPTAFVTRAELDGDEWVINGEKWFSSHASFASFFITMA
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHEEEEEE
VTDPDADRHGRASMFVVPADTPGITIVRDVGVWGHDEDEGHHTYLRYEDVRIPRDHLLGE
EECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHCCC
RGRGFAVAQTRLGGGRIHHAMRTVGLVRSSLDMMLERAVSRRSGTGTLADRQLVQEMIAD
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SWIQLEQFRLLVLQTAWKIDRYQDYRAVIADISAVKAAMPKVLLDVAGRAIQLHGSLGIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
TEMPFGKWVLESYHMGLADGATELHKVAVAKQLLKGVAPTPGLFPTGHLIAAKEAARARF
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHH
ATELAELAELDEQVPTP
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]