Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718193

Identifier: 119718193

GI number: 119718193

Start: 4193625

End: 4194737

Strand: Reverse

Name: 119718193

Synonym: Noca_3974

Alternate gene names: NA

Gene position: 4194737-4193625 (Counterclockwise)

Preceding gene: 119718194

Following gene: 119718192

Centisome position: 84.13

GC content: 76.73

Gene sequence:

>1113_bases
ATGACCGACCGGCTGCCGGACGAGATCCTCCTCGCCTTCGCCCGGGCGCTGCGGGCCGCAGGCGTCCCCGTGACCCACGA
CCGCGCCCAGGGGTTCCTGGCGGCGGCCGCCGAGCTCGGCGTGGCCGACCAGCGCGCGACCTACCTCGCCGGCCGCGCGA
CGCTGTGCGCCGGGCCGGACGACCTCGAGCGCTACGACCAGGTCTTCCACGCGTTCTTCAACGCCCGCGACGGGCTGCCC
CGGTCGCGTCCGGCCCACCCCGGGGCACCGTTCGCCGGGCTGCCGCTGGAGGAGTCCACCGGCACCGGCGAGGGCCAGGA
CGAGGAGGTGCTGCGGGCCCTGGCCAGCGAGACCGAGGTGCTGCGCCAGCGCGACGTCGCCTCGCTCAGCGCGGCTGAGA
AGCACCGGCTCGCGGGCATGTTCGCGACCCTGCGGCCGCGACCACCGACGCGGCGTACCGCCCGCCACCAGGCGTGGCAC
CGCGGCGAGGTCGACGCCTCGCGCACGCTGCGGGCCTCGCTGCGCCGGATGGGCGAGCCGGCCGACATCGCCTGGCGGCG
CCGCCGCCGGCGGCCGCGACGGGTGGTGCTGCTCGTGGACGTGTCCGGCTCGATGAGCGGGTACGCCGACGCGCTGCTGC
GCCTGGCGCACCGGTTCACCCAGGTGGGGCGCGAGAGCGGCGGCGTGGTCGAGACGTTCACCGTCGGGACCCGGCTGACC
CACCTGACGCGCGCGATGCGGGTCCGCGACCCCGAGCGGGCGCTGGTCGCGGCCGGTGAGACCGTGCCCGACTGGTCGGG
CGGCACCCGCCTGGGCGAGACGTTGCGGATCTTCCTGGACCGGTGGGGCCAGCGCGGCCTGGCGCGCGGCGCGGTCGTCG
TCGTGTTCAGCGACGGCTGGGAGCGCGGCGACCCGACGCTGCTCGGCGAGCAGATGGCGCGGCTGCAGCGGGTCGCGCAC
CGGGTGGTGTGGGTCAACCCGCACCGCGGCAAGGACGGCTACGAGCCCGTGCAGCAGGGCGTGGTCGCCGCGCTGCCGCA
CTGCGACGACTTCGTCGCCGGGCACTCCCTGGCGACCTTCGCGGAGCTGGTGGAGGTGGTGTCCCGTGCGTGA

Upstream 100 bases:

>100_bases
CACCGCCGGCCGGGCGGCGGGCGGGCGAGCGGTGCGCAGGCAACCGTTGCGGCACGCGACTCGGTGGCTGGCTCTCCGCC
GGCCGGGTGGTGGGGGGCCG

Downstream 100 bases:

>100_bases
CGTGCTGCCCGAGCTGCTGCAGTGGTGGCGGTCCGGTGAGACGGTCGGTGTCGGCACGGTCGTGGCGACGTTCCGGTCCG
CGCCGCGCCCGCCCGGCGCC

Product: VWA containing CoxE family protein

Products: NA

Alternate protein names: VWA Containing CoxE-Like; VWA Containing CoxE-Like Protein; VWA Domain Containing CoxE-Like Protein; Carbon Monoxide Dehydrogenase E Protein; VWA Domain CoxE-Like Family Protein; Carbon Monoxide Dehydrogenase CoxE Subunit; Von Willebrand Factor Type A Domain-Containing Protein; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; Carbon Monoxide Dehydrogenase Accessory Protein; CoxE Protein; Vwa Domain Coxe-Like Protein; VWA Domain-Containing CoxE-Like Family Protein; CoxE-Like Protein

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MTDRLPDEILLAFARALRAAGVPVTHDRAQGFLAAAAELGVADQRATYLAGRATLCAGPDDLERYDQVFHAFFNARDGLP
RSRPAHPGAPFAGLPLEESTGTGEGQDEEVLRALASETEVLRQRDVASLSAAEKHRLAGMFATLRPRPPTRRTARHQAWH
RGEVDASRTLRASLRRMGEPADIAWRRRRRRPRRVVLLVDVSGSMSGYADALLRLAHRFTQVGRESGGVVETFTVGTRLT
HLTRAMRVRDPERALVAAGETVPDWSGGTRLGETLRIFLDRWGQRGLARGAVVVVFSDGWERGDPTLLGEQMARLQRVAH
RVVWVNPHRGKDGYEPVQQGVVAALPHCDDFVAGHSLATFAELVEVVSRA

Sequences:

>Translated_370_residues
MTDRLPDEILLAFARALRAAGVPVTHDRAQGFLAAAAELGVADQRATYLAGRATLCAGPDDLERYDQVFHAFFNARDGLP
RSRPAHPGAPFAGLPLEESTGTGEGQDEEVLRALASETEVLRQRDVASLSAAEKHRLAGMFATLRPRPPTRRTARHQAWH
RGEVDASRTLRASLRRMGEPADIAWRRRRRRPRRVVLLVDVSGSMSGYADALLRLAHRFTQVGRESGGVVETFTVGTRLT
HLTRAMRVRDPERALVAAGETVPDWSGGTRLGETLRIFLDRWGQRGLARGAVVVVFSDGWERGDPTLLGEQMARLQRVAH
RVVWVNPHRGKDGYEPVQQGVVAALPHCDDFVAGHSLATFAELVEVVSRA
>Mature_369_residues
TDRLPDEILLAFARALRAAGVPVTHDRAQGFLAAAAELGVADQRATYLAGRATLCAGPDDLERYDQVFHAFFNARDGLPR
SRPAHPGAPFAGLPLEESTGTGEGQDEEVLRALASETEVLRQRDVASLSAAEKHRLAGMFATLRPRPPTRRTARHQAWHR
GEVDASRTLRASLRRMGEPADIAWRRRRRRPRRVVLLVDVSGSMSGYADALLRLAHRFTQVGRESGGVVETFTVGTRLTH
LTRAMRVRDPERALVAAGETVPDWSGGTRLGETLRIFLDRWGQRGLARGAVVVVFSDGWERGDPTLLGEQMARLQRVAHR
VVWVNPHRGKDGYEPVQQGVVAALPHCDDFVAGHSLATFAELVEVVSRA

Specific function: Unknown

COG id: COG3552

COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40710; Mature: 40578

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRLPDEILLAFARALRAAGVPVTHDRAQGFLAAAAELGVADQRATYLAGRATLCAGPD
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCHH
DLERYDQVFHAFFNARDGLPRSRPAHPGAPFAGLPLEESTGTGEGQDEEVLRALASETEV
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LRQRDVASLSAAEKHRLAGMFATLRPRPPTRRTARHQAWHRGEVDASRTLRASLRRMGEP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
ADIAWRRRRRRPRRVVLLVDVSGSMSGYADALLRLAHRFTQVGRESGGVVETFTVGTRLT
HHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHH
HLTRAMRVRDPERALVAAGETVPDWSGGTRLGETLRIFLDRWGQRGLARGAVVVVFSDGW
HHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC
ERGDPTLLGEQMARLQRVAHRVVWVNPHRGKDGYEPVQQGVVAALPHCDDFVAGHSLATF
CCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCHHHHH
AELVEVVSRA
HHHHHHHHCC
>Mature Secondary Structure 
TDRLPDEILLAFARALRAAGVPVTHDRAQGFLAAAAELGVADQRATYLAGRATLCAGPD
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCHH
DLERYDQVFHAFFNARDGLPRSRPAHPGAPFAGLPLEESTGTGEGQDEEVLRALASETEV
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LRQRDVASLSAAEKHRLAGMFATLRPRPPTRRTARHQAWHRGEVDASRTLRASLRRMGEP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
ADIAWRRRRRRPRRVVLLVDVSGSMSGYADALLRLAHRFTQVGRESGGVVETFTVGTRLT
HHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHH
HLTRAMRVRDPERALVAAGETVPDWSGGTRLGETLRIFLDRWGQRGLARGAVVVVFSDGW
HHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC
ERGDPTLLGEQMARLQRVAHRVVWVNPHRGKDGYEPVQQGVVAALPHCDDFVAGHSLATF
CCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCHHHHH
AELVEVVSRA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA