| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is cutL [H]
Identifier: 119718188
GI number: 119718188
Start: 4184733
End: 4187240
Strand: Reverse
Name: cutL [H]
Synonym: Noca_3969
Alternate gene names: 119718188
Gene position: 4187240-4184733 (Counterclockwise)
Preceding gene: 119718189
Following gene: 119718187
Centisome position: 83.98
GC content: 71.21
Gene sequence:
>2508_bases ATGAGCACCACCCAGGAGCGACCCGCCGACGCCGTCGAGCGCGAGATCGGCCGTGACCGCCGCCGCAAGGAGGACCAGCG GCTGATCACCGGCCGGACCCGCTGGACCGACAACATGACGCTGCCGGGCATGGTGCACCTCGCGATGGTGCGCAGCCCGT TCGCCCACGCGCGGATCGTCGCGATCGACACCGCCGCGGCCAAGCAGTCGCCGAACGTCGTCGACGTCCTCACCGGCGCC GACCTCGGCGAGTCGCTCGGCGTGAACATCAACGCCTGGCCGATCACCCCCGACCAGGTCACGCCGACGCACTCCCCGAT GCCGAGCGACCGGGTCGCGTTCGCCGGCGAGATCGTCGCCGTCGTCGTCGCGCGCAGCGCCGCCGAGGCCCGCGACGCCG CCGAGCTCGTCGACGTGGAGTACGACGAGCTCCCGGCGGCCCTCGACCTGAAGGAGGCGGCGGCCGCCAGCAGTGAGCAG GGCGTGCTGGCCCACCCCGACCTGGGCACCAACAAGTCGGCGTACTGGGTCTTCGACTCCGGCGAGGCCGGCACCGGTGG CTCCGTGGAGGACGCCATCGCGAAGGCCCGCACCGACGGCATCGTGATCGAGCGGGAGTACCGCCAGCAGCGGCTGATCC CGGCGTTCATGGAGCCGCGGTCCACCGTCGTCGACCCGACCGGCGAGCAGCTGACGATGTGGACGGCCACCCAGATCCCG CACATCCTGCGGTTCGCCCTCGCGGCGACGACCGGGGTGCCGGAGTCCAAGATCCGGGTGATCGCGCCCGACGTGGGCGG CGGCTTCGGCGGCAAGCTGCAGACGACGCCCGAGGAATGGATCACCTGGGCAGTGGCCCGCCGGCTCGGCAAACCGGCCA AGTACACCGAGACCCGCTCCGAGAGCCTGATGTCCGGCCACCACGGCCGCGACCAGTGGCAGAAGCTCACCCTCGCGGCC GAGAAGGACGGCACCGTCACCGGCTTCAAGGTCGACCTGCTCGCCGACCTGGGCGCGTACGTGTCGCTGGTCGGCGGCGG CGTCCCGGTGCTCGGGGCGTTCATGTTCAACTCGATCTACAAGTTCCCGGCCTACCGGTTCGCGGTGCAGACGGTGCTCA CGAACAAGACCTGGACCGACGCCTACCGGGGCGCCGGGCGGCCGGAGGCGACGTACGCCATCGAGCGGATGATGAACGAG CTCGCCGCCGAGGTCGGCGTCGACCCGCTCGAGATCCGCGAGAAGAACTGGATCAAGCACGAGGAGTTCCCGTTCACCAC GGTCGCCGGCCTCGAGTACGACTCCGGCAACTACGAGGCCGCCACCGCGCGCGCCAAGGAGATGCTCGGGTACGACGAGC TCCGGGCCGAGCAGCGTCGCCGCCGCGAGGCGGGCGACCCGGTGCAGCTGGGGATCGGCGTCTCGACCTTCACCGAGATG TGCGGCCTGGCACCCTCACGGGTCCTCGGGCAGCTCGACTACGGCGCCGGCGGGTGGGAGCACGCGAGCGTGCGGATGCT CGCCACCGGCAAGGTCGAGGTCGTCACCGGCACCTCGGCGCACGGGCAGGGCCACGAGACGGCGTTCAGCCAGATCGTCG CCGACCGGCTCGGGGTGGCCTTCGAGGACGTCGAGGTGCTCCACGGCGACACCCAGGTCGCCCCGAAGGGCCTGGACACC TACGGCTCCCGGTCGCTGGTCGTCGGCGGCGAGGCGATCGTCCGGGCCGCCGACAAGGTGATCGAGAAGGCGAAGCCGAT CGCGGCGCACCTGCTCGAGGCGTCGGTGGACGACGTCGAGTTCTCCGGCGGCCGGTTCTCGGTGCGCGGCACCGACCAGG GGATGGGCATCGGGGAGGTCGCGCTCGCGACCTTCGCCGCCCACAACCTGCCCGACGGCGTGGAGGCCTCGCTCGACTCG GACGCGACGTACGACCCGGTGGCCTTCAACTTCCCGCACGGCACCCACCTGTGCGCGGTCGAGGTGGACACCGAGACCGG CGCGCTGAAGCTGCGCAAGTACGTCTGCTGCGACGACATCGGCACGATCATCAACCCACTGATCGTCAGCGGGCAGGTGC ACGGCGGGCTGGTGCAGGGCATCGCGCAGGCGCTGTGGGAGGAGGCGGTGTACGACGACGCCGGGACGCTGGTGTCCGGG TCGTTCGTCGACTACCTGCTGCCGACCGCCGCCGACACGATCAGCTTCGAGATCGACCACACCACCTCGCCCAGCACCAC CAACTCGCTCGGCACCAAGGGCGTCGGCGAGGCCGGGACGATCGCCTCGACCCCGGCTGTGGTCAACGCGGTCGTCGATG CGGTCCGCCACCTCGGCATCAACGACATCCAGATGCCGTGCACCCCCGAGCGGGTGTGGAAGGCGATCACCGGCGCCGGT GCGGGTGGATCGACCGAAGGCGCCGCGATGCCGCACTTCGAGTCCGGTGGAGCGAGCGGCAACCAGGAGCAACCCGGCAC CTCGAGCACGGAAGGAGCGGGCGCATGA
Upstream 100 bases:
>100_bases AGGAGATCCGCCTGGGTCTCGAGGGCAACCTGTGCCGGTGCACGGGCTACCACAACATCGTGCGCGCGGTTCAGCAGGCG AGCGGGCAGGGAGCCCCGGC
Downstream 100 bases:
>100_bases TCGCCACCCCATTCACATCCTCACTTCGCTCCGGTCTGAACGGGGGCCCCGCATGATCCCCGCATCGTTCGACTACGTCG CCCCCGCCTCGGTCGAGGAC
Product: xanthine dehydrogenase, molybdenum binding subunit apoprotein
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 835; Mature: 834
Protein sequence:
>835_residues MSTTQERPADAVEREIGRDRRRKEDQRLITGRTRWTDNMTLPGMVHLAMVRSPFAHARIVAIDTAAAKQSPNVVDVLTGA DLGESLGVNINAWPITPDQVTPTHSPMPSDRVAFAGEIVAVVVARSAAEARDAAELVDVEYDELPAALDLKEAAAASSEQ GVLAHPDLGTNKSAYWVFDSGEAGTGGSVEDAIAKARTDGIVIEREYRQQRLIPAFMEPRSTVVDPTGEQLTMWTATQIP HILRFALAATTGVPESKIRVIAPDVGGGFGGKLQTTPEEWITWAVARRLGKPAKYTETRSESLMSGHHGRDQWQKLTLAA EKDGTVTGFKVDLLADLGAYVSLVGGGVPVLGAFMFNSIYKFPAYRFAVQTVLTNKTWTDAYRGAGRPEATYAIERMMNE LAAEVGVDPLEIREKNWIKHEEFPFTTVAGLEYDSGNYEAATARAKEMLGYDELRAEQRRRREAGDPVQLGIGVSTFTEM CGLAPSRVLGQLDYGAGGWEHASVRMLATGKVEVVTGTSAHGQGHETAFSQIVADRLGVAFEDVEVLHGDTQVAPKGLDT YGSRSLVVGGEAIVRAADKVIEKAKPIAAHLLEASVDDVEFSGGRFSVRGTDQGMGIGEVALATFAAHNLPDGVEASLDS DATYDPVAFNFPHGTHLCAVEVDTETGALKLRKYVCCDDIGTIINPLIVSGQVHGGLVQGIAQALWEEAVYDDAGTLVSG SFVDYLLPTAADTISFEIDHTTSPSTTNSLGTKGVGEAGTIASTPAVVNAVVDAVRHLGINDIQMPCTPERVWKAITGAG AGGSTEGAAMPHFESGGASGNQEQPGTSSTEGAGA
Sequences:
>Translated_835_residues MSTTQERPADAVEREIGRDRRRKEDQRLITGRTRWTDNMTLPGMVHLAMVRSPFAHARIVAIDTAAAKQSPNVVDVLTGA DLGESLGVNINAWPITPDQVTPTHSPMPSDRVAFAGEIVAVVVARSAAEARDAAELVDVEYDELPAALDLKEAAAASSEQ GVLAHPDLGTNKSAYWVFDSGEAGTGGSVEDAIAKARTDGIVIEREYRQQRLIPAFMEPRSTVVDPTGEQLTMWTATQIP HILRFALAATTGVPESKIRVIAPDVGGGFGGKLQTTPEEWITWAVARRLGKPAKYTETRSESLMSGHHGRDQWQKLTLAA EKDGTVTGFKVDLLADLGAYVSLVGGGVPVLGAFMFNSIYKFPAYRFAVQTVLTNKTWTDAYRGAGRPEATYAIERMMNE LAAEVGVDPLEIREKNWIKHEEFPFTTVAGLEYDSGNYEAATARAKEMLGYDELRAEQRRRREAGDPVQLGIGVSTFTEM CGLAPSRVLGQLDYGAGGWEHASVRMLATGKVEVVTGTSAHGQGHETAFSQIVADRLGVAFEDVEVLHGDTQVAPKGLDT YGSRSLVVGGEAIVRAADKVIEKAKPIAAHLLEASVDDVEFSGGRFSVRGTDQGMGIGEVALATFAAHNLPDGVEASLDS DATYDPVAFNFPHGTHLCAVEVDTETGALKLRKYVCCDDIGTIINPLIVSGQVHGGLVQGIAQALWEEAVYDDAGTLVSG SFVDYLLPTAADTISFEIDHTTSPSTTNSLGTKGVGEAGTIASTPAVVNAVVDAVRHLGINDIQMPCTPERVWKAITGAG AGGSTEGAAMPHFESGGASGNQEQPGTSSTEGAGA >Mature_834_residues STTQERPADAVEREIGRDRRRKEDQRLITGRTRWTDNMTLPGMVHLAMVRSPFAHARIVAIDTAAAKQSPNVVDVLTGAD LGESLGVNINAWPITPDQVTPTHSPMPSDRVAFAGEIVAVVVARSAAEARDAAELVDVEYDELPAALDLKEAAAASSEQG VLAHPDLGTNKSAYWVFDSGEAGTGGSVEDAIAKARTDGIVIEREYRQQRLIPAFMEPRSTVVDPTGEQLTMWTATQIPH ILRFALAATTGVPESKIRVIAPDVGGGFGGKLQTTPEEWITWAVARRLGKPAKYTETRSESLMSGHHGRDQWQKLTLAAE KDGTVTGFKVDLLADLGAYVSLVGGGVPVLGAFMFNSIYKFPAYRFAVQTVLTNKTWTDAYRGAGRPEATYAIERMMNEL AAEVGVDPLEIREKNWIKHEEFPFTTVAGLEYDSGNYEAATARAKEMLGYDELRAEQRRRREAGDPVQLGIGVSTFTEMC GLAPSRVLGQLDYGAGGWEHASVRMLATGKVEVVTGTSAHGQGHETAFSQIVADRLGVAFEDVEVLHGDTQVAPKGLDTY GSRSLVVGGEAIVRAADKVIEKAKPIAAHLLEASVDDVEFSGGRFSVRGTDQGMGIGEVALATFAAHNLPDGVEASLDSD ATYDPVAFNFPHGTHLCAVEVDTETGALKLRKYVCCDDIGTIINPLIVSGQVHGGLVQGIAQALWEEAVYDDAGTLVSGS FVDYLLPTAADTISFEIDHTTSPSTTNSLGTKGVGEAGTIASTPAVVNAVVDAVRHLGINDIQMPCTPERVWKAITGAGA GGSTEGAAMPHFESGGASGNQEQPGTSSTEGAGA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=802, Percent_Identity=25.0623441396509, Blast_Score=168, Evalue=2e-41, Organism=Homo sapiens, GI91823271, Length=783, Percent_Identity=25.0319284802043, Blast_Score=151, Evalue=2e-36, Organism=Escherichia coli, GI1789230, Length=780, Percent_Identity=28.4615384615385, Blast_Score=271, Evalue=1e-73, Organism=Escherichia coli, GI1789246, Length=820, Percent_Identity=26.5853658536585, Blast_Score=214, Evalue=2e-56, Organism=Escherichia coli, GI1786478, Length=801, Percent_Identity=24.2197253433208, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17539860, Length=790, Percent_Identity=24.4303797468354, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17540638, Length=814, Percent_Identity=23.7100737100737, Blast_Score=145, Evalue=8e-35, Organism=Caenorhabditis elegans, GI32566215, Length=783, Percent_Identity=22.9885057471264, Blast_Score=112, Evalue=1e-24, Organism=Drosophila melanogaster, GI17737937, Length=763, Percent_Identity=25.0327653997379, Blast_Score=137, Evalue=3e-32, Organism=Drosophila melanogaster, GI24647193, Length=775, Percent_Identity=22.5806451612903, Blast_Score=101, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 88724; Mature: 88593
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTQERPADAVEREIGRDRRRKEDQRLITGRTRWTDNMTLPGMVHLAMVRSPFAHARIV CCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEE AIDTAAAKQSPNVVDVLTGADLGESLGVNINAWPITPDQVTPTHSPMPSDRVAFAGEIVA EEEHHHHCCCCCEEEEECCCCCCHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH VVVARSAAEARDAAELVDVEYDELPAALDLKEAAAASSEQGVLAHPDLGTNKSAYWVFDS HHHHHHHHHHHHHHHHHCCCHHHCCCHHCHHHHHCCCCCCCEEECCCCCCCCCEEEEEEC GEAGTGGSVEDAIAKARTDGIVIEREYRQQRLIPAFMEPRSTVVDPTGEQLTMWTATQIP CCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHCCHHHHCCCCCEECCCCCEEEEEEHHHHH HILRFALAATTGVPESKIRVIAPDVGGGFGGKLQTTPEEWITWAVARRLGKPAKYTETRS HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH ESLMSGHHGRDQWQKLTLAAEKDGTVTGFKVDLLADLGAYVSLVGGGVPVLGAFMFNSIY HHHHCCCCCHHHHHEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH KFPAYRFAVQTVLTNKTWTDAYRGAGRPEATYAIERMMNELAAEVGVDPLEIREKNWIKH HCCHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC EEFPFTTVAGLEYDSGNYEAATARAKEMLGYDELRAEQRRRREAGDPVQLGIGVSTFTEM CCCCCEEEECEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEECCHHHHHHH CGLAPSRVLGQLDYGAGGWEHASVRMLATGKVEVVTGTSAHGQGHETAFSQIVADRLGVA HCCCHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHCCC FEDVEVLHGDTQVAPKGLDTYGSRSLVVGGEAIVRAADKVIEKAKPIAAHLLEASVDDVE HHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEE FSGGRFSVRGTDQGMGIGEVALATFAAHNLPDGVEASLDSDATYDPVAFNFPHGTHLCAV ECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEE EVDTETGALKLRKYVCCDDIGTIINPLIVSGQVHGGLVQGIAQALWEEAVYDDAGTLVSG EECCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECC SFVDYLLPTAADTISFEIDHTTSPSTTNSLGTKGVGEAGTIASTPAVVNAVVDAVRHLGI CHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC NDIQMPCTPERVWKAITGAGAGGSTEGAAMPHFESGGASGNQEQPGTSSTEGAGA CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STTQERPADAVEREIGRDRRRKEDQRLITGRTRWTDNMTLPGMVHLAMVRSPFAHARIV CCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEE AIDTAAAKQSPNVVDVLTGADLGESLGVNINAWPITPDQVTPTHSPMPSDRVAFAGEIVA EEEHHHHCCCCCEEEEECCCCCCHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH VVVARSAAEARDAAELVDVEYDELPAALDLKEAAAASSEQGVLAHPDLGTNKSAYWVFDS HHHHHHHHHHHHHHHHHCCCHHHCCCHHCHHHHHCCCCCCCEEECCCCCCCCCEEEEEEC GEAGTGGSVEDAIAKARTDGIVIEREYRQQRLIPAFMEPRSTVVDPTGEQLTMWTATQIP CCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHCCHHHHCCCCCEECCCCCEEEEEEHHHHH HILRFALAATTGVPESKIRVIAPDVGGGFGGKLQTTPEEWITWAVARRLGKPAKYTETRS HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH ESLMSGHHGRDQWQKLTLAAEKDGTVTGFKVDLLADLGAYVSLVGGGVPVLGAFMFNSIY HHHHCCCCCHHHHHEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH KFPAYRFAVQTVLTNKTWTDAYRGAGRPEATYAIERMMNELAAEVGVDPLEIREKNWIKH HCCHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC EEFPFTTVAGLEYDSGNYEAATARAKEMLGYDELRAEQRRRREAGDPVQLGIGVSTFTEM CCCCCEEEECEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEECCHHHHHHH CGLAPSRVLGQLDYGAGGWEHASVRMLATGKVEVVTGTSAHGQGHETAFSQIVADRLGVA HCCCHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHCCC FEDVEVLHGDTQVAPKGLDTYGSRSLVVGGEAIVRAADKVIEKAKPIAAHLLEASVDDVE HHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEE FSGGRFSVRGTDQGMGIGEVALATFAAHNLPDGVEASLDSDATYDPVAFNFPHGTHLCAV ECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEE EVDTETGALKLRKYVCCDDIGTIINPLIVSGQVHGGLVQGIAQALWEEAVYDDAGTLVSG EECCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECC SFVDYLLPTAADTISFEIDHTTSPSTTNSLGTKGVGEAGTIASTPAVVNAVVDAVRHLGI CHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC NDIQMPCTPERVWKAITGAGAGGSTEGAAMPHFESGGASGNQEQPGTSSTEGAGA CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]