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The map label for this gene is ybjZ [C]

Identifier: 119718179

GI number: 119718179

Start: 4172778

End: 4175315

Strand: Reverse

Name: ybjZ [C]

Synonym: Noca_3960

Alternate gene names: 119718179

Gene position: 4175315-4172778 (Counterclockwise)

Preceding gene: 119718180

Following gene: 119718178

Centisome position: 83.74

GC content: 71.99

Gene sequence:

>2538_bases
ATGATCAAGGCCGCCCTCAGGAGCCTGCTCGGGCGCAAGCTGCGCCTGCTGATGAGCACCTTCGCGATCGTGCTCGGGGT
CGCGTTCGTCGCCGGCTCGCTGATCTTCTCCGACATGCTCAACCGGAGCTTCACCGCGATCTTCGCCTCGACGGTCGGCG
ACGTGATCGTGCGCCCGGAGGGTGGCGCGTCCCTCGACGGCACCCCCTCCACGCTCACGGTCCCGTCCGACCTGCTCCCG
CGGCTCGAGTCGGTCCCCGGCGCCGCCCGGGTGGACGGCAACGTCAGCGCCGTCGGCGTGTTCGTGGTCAGCCGCGAGAA
CAAGCTGATCGGCGGCAACGGCGCGCCCGGCATCGGCGTCAACTGGAACGACGCCCCTGCGGGCCACGGTCTCGAGGGGC
TCTCGGTCGTCGAGGGCCGGGTGCCGGAGGGCGCCGACGAGGTGGCCCTCGACGTCGCGGCCGCCGACAAGGCGGGGTAC
GCCGTCGGCGACACGATCCGGGTGATCACCTCGACCGACACCCCGGTGCTGCAGCCCGAGCTGGTCGGCCTGGTCGACTT
CGCGGACGGCGGCTCGCTCAACGGCGCCACGCTCACGGTCTTCGACACGACCACGGCCCGGGACCTGTTCCTCGGGGGCG
AGGACGCCTACACCGACGTGTGGGTCACCGCCGAGGGTGGCACCTCCCAGGCCGAGCTGCGCGACCGGGTGCGCGAGGTG
CTGCCCGGCGACCTGGAGGCGATCACCGGCGACGACGCGGCCGACGAGAGCGGCAACCTGCTGCTCGAGGCCGTCTCGTT
CATCACGACCTTCCTGCTGATCTTCGCCGGCATCGCGCTCGTGGTGGGCGCGTTCCTCATCGCCAACACGTTCTCGATCC
TGGTCGCGCAGCGCAGCCGCGAGCTGGCGCTGCTGCGCGCCCTGGGCGCCTCCCAGCGGCAGGTCACCCGCTCGGTCCTG
GTCGAGGCCGCCGTCGTCGGGGCGCTGGGTTCCACGCTGGGACTCGGCCTCGGGGTGCTGCTCGCGCTGGCGATCCGGGC
GATGTTCGAGCAGGTCGGCCTGGACCTCTCCGGCCAGGGGATCATCTTCGCCCCGCGCACGGTGATCGCCGGCTACGCCG
TGGGCGTGCTGATCACGATGGCGGCCGCCTGGCTGCCGGCTCGCCGTACGGCGCGGATCGCGCCGGTGCAGGCGCTCCGC
GACGACGTGGCGCTCCCGGAATCCTCGATCCACCGGCGCCTGGTGGCCGGGGTCGTGCAGCTGGTCGTGGGCGCGGTCGC
GCTCACCGCCGGGCTGTTCTTCGACGTCCCGCGGGCCGGGTGGCTGGTCGGCGTCGGCGTGCTGCTGATCTTCCTCGGGG
TGGCCACGGCCAGCCCGGTGATCGCGCGGCCGGTGCTGCACCTGTTCGGCGTGCTGTACCGCCGCGCGTTCGGCCCGGTC
GGCAACCTGGCGGGGGAGAATGCGCGGCGCAACCCCCGGCGTACCACCGCGACCGCCTCGGCGTTGATGATCGGCCTCGC
GCTGGCCACGACGATGGCAATCCTCGGCGCCTCGGCGAAGGCCAGTGTCGACCGCATCATCGAGGACAACTTCGTCGGCG
ACTTCGTCGTCGGCAACGTGGTCGGCCAGGGCTTCTCGCCCGCGATCGGCGACCAGATGGCGCGGGTCGACGGGGTCGAG
GCCGTCGTGCGGCAGCGCTACGTGCCGATGGAGGTCGACGGCGACGACACCTACGTGTCCGGCGTCGACCCGCACGACCT
CTCCGGGCTGCTCGACCTGACGATGACCGAGGGCAGCCGCGACGACCTGGTCGACGGGTCCGTGCTGGTGTCCGAGGAGT
ACGCCGCCGACCACGGCGTGGCCGTCGGCGACCAGATCGAGCTCGACACGCCCGCCGGCACCGACAGGCACCCCGTCGTG
GGCGAGTTCGAGGAGAACCCGCTGATCGGCACCGGCATCGTCACGACGCTGCCGACCCTGGTCGCGGCCGGCTACCCCGA
GAGCGACAACCAGCTGATCATCGACACCGACGGGTCGCCGGGGGTCCACGAGCGGCTCGACGCGGTGGTCGCGGACCTGC
CGGTCGTCTCGGTCAAGGACCAGGCGGAGTTCGCGGCGGAGCAGCGCGAGCCCATCGACCAGCTGGTGCTGATGATCTAC
GCGCTGCTCGGGCTGGCCCTGGTGATCGCGGTGCTCGGCATCGTCAACACCCTCGCGCTCTCGGTCATCGAGCGCACCCG
CGAGCTCGGGCTGCTGCGGGCGATCGGCGTCAGCCGCCGTCAGCTGCGCCGGATGATCGGCCTCGAGTCGGTGGTGATCG
CGGTGCTCGGGGCGGTGCTCGGGCTGCTCCTCGGCCTGTGCTTCGGTGTGGTGCTGATGTACGCCCTGCGCGACGAGGGG
CTCGAGGTGATCAGCGTCCCGGGCGTCCAGCTCGTGGTTTTCTTGGTGCTCTCGATCGTCATCGGGTTCCTGGCCGCCGT
GTTCCCGGCCCGCCGGGCCGCACGTCTCGACGTACTGCAGGCAATTGCGGCAGAGTGA

Upstream 100 bases:

>100_bases
TCCGGCCCGCACTTCCGCGGGGACCCCGCATGAACACCCCACGAAACTGCGCACTTCCCCCGCTGCGCTCCTCCGGCCCG
CACTTCCGCGGGGACCCCGC

Downstream 100 bases:

>100_bases
GCCCTGATGATGCGACGGATCCCTCGGTCTTGATCCCTCGAGTCCACGTCGTTCCCCCCGATCTGGGGACGCGGAGGTCG
ATGTCTGCCTAAAGTGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 845; Mature: 845

Protein sequence:

>845_residues
MIKAALRSLLGRKLRLLMSTFAIVLGVAFVAGSLIFSDMLNRSFTAIFASTVGDVIVRPEGGASLDGTPSTLTVPSDLLP
RLESVPGAARVDGNVSAVGVFVVSRENKLIGGNGAPGIGVNWNDAPAGHGLEGLSVVEGRVPEGADEVALDVAAADKAGY
AVGDTIRVITSTDTPVLQPELVGLVDFADGGSLNGATLTVFDTTTARDLFLGGEDAYTDVWVTAEGGTSQAELRDRVREV
LPGDLEAITGDDAADESGNLLLEAVSFITTFLLIFAGIALVVGAFLIANTFSILVAQRSRELALLRALGASQRQVTRSVL
VEAAVVGALGSTLGLGLGVLLALAIRAMFEQVGLDLSGQGIIFAPRTVIAGYAVGVLITMAAAWLPARRTARIAPVQALR
DDVALPESSIHRRLVAGVVQLVVGAVALTAGLFFDVPRAGWLVGVGVLLIFLGVATASPVIARPVLHLFGVLYRRAFGPV
GNLAGENARRNPRRTTATASALMIGLALATTMAILGASAKASVDRIIEDNFVGDFVVGNVVGQGFSPAIGDQMARVDGVE
AVVRQRYVPMEVDGDDTYVSGVDPHDLSGLLDLTMTEGSRDDLVDGSVLVSEEYAADHGVAVGDQIELDTPAGTDRHPVV
GEFEENPLIGTGIVTTLPTLVAAGYPESDNQLIIDTDGSPGVHERLDAVVADLPVVSVKDQAEFAAEQREPIDQLVLMIY
ALLGLALVIAVLGIVNTLALSVIERTRELGLLRAIGVSRRQLRRMIGLESVVIAVLGAVLGLLLGLCFGVVLMYALRDEG
LEVISVPGVQLVVFLVLSIVIGFLAAVFPARRAARLDVLQAIAAE

Sequences:

>Translated_845_residues
MIKAALRSLLGRKLRLLMSTFAIVLGVAFVAGSLIFSDMLNRSFTAIFASTVGDVIVRPEGGASLDGTPSTLTVPSDLLP
RLESVPGAARVDGNVSAVGVFVVSRENKLIGGNGAPGIGVNWNDAPAGHGLEGLSVVEGRVPEGADEVALDVAAADKAGY
AVGDTIRVITSTDTPVLQPELVGLVDFADGGSLNGATLTVFDTTTARDLFLGGEDAYTDVWVTAEGGTSQAELRDRVREV
LPGDLEAITGDDAADESGNLLLEAVSFITTFLLIFAGIALVVGAFLIANTFSILVAQRSRELALLRALGASQRQVTRSVL
VEAAVVGALGSTLGLGLGVLLALAIRAMFEQVGLDLSGQGIIFAPRTVIAGYAVGVLITMAAAWLPARRTARIAPVQALR
DDVALPESSIHRRLVAGVVQLVVGAVALTAGLFFDVPRAGWLVGVGVLLIFLGVATASPVIARPVLHLFGVLYRRAFGPV
GNLAGENARRNPRRTTATASALMIGLALATTMAILGASAKASVDRIIEDNFVGDFVVGNVVGQGFSPAIGDQMARVDGVE
AVVRQRYVPMEVDGDDTYVSGVDPHDLSGLLDLTMTEGSRDDLVDGSVLVSEEYAADHGVAVGDQIELDTPAGTDRHPVV
GEFEENPLIGTGIVTTLPTLVAAGYPESDNQLIIDTDGSPGVHERLDAVVADLPVVSVKDQAEFAAEQREPIDQLVLMIY
ALLGLALVIAVLGIVNTLALSVIERTRELGLLRAIGVSRRQLRRMIGLESVVIAVLGAVLGLLLGLCFGVVLMYALRDEG
LEVISVPGVQLVVFLVLSIVIGFLAAVFPARRAARLDVLQAIAAE
>Mature_845_residues
MIKAALRSLLGRKLRLLMSTFAIVLGVAFVAGSLIFSDMLNRSFTAIFASTVGDVIVRPEGGASLDGTPSTLTVPSDLLP
RLESVPGAARVDGNVSAVGVFVVSRENKLIGGNGAPGIGVNWNDAPAGHGLEGLSVVEGRVPEGADEVALDVAAADKAGY
AVGDTIRVITSTDTPVLQPELVGLVDFADGGSLNGATLTVFDTTTARDLFLGGEDAYTDVWVTAEGGTSQAELRDRVREV
LPGDLEAITGDDAADESGNLLLEAVSFITTFLLIFAGIALVVGAFLIANTFSILVAQRSRELALLRALGASQRQVTRSVL
VEAAVVGALGSTLGLGLGVLLALAIRAMFEQVGLDLSGQGIIFAPRTVIAGYAVGVLITMAAAWLPARRTARIAPVQALR
DDVALPESSIHRRLVAGVVQLVVGAVALTAGLFFDVPRAGWLVGVGVLLIFLGVATASPVIARPVLHLFGVLYRRAFGPV
GNLAGENARRNPRRTTATASALMIGLALATTMAILGASAKASVDRIIEDNFVGDFVVGNVVGQGFSPAIGDQMARVDGVE
AVVRQRYVPMEVDGDDTYVSGVDPHDLSGLLDLTMTEGSRDDLVDGSVLVSEEYAADHGVAVGDQIELDTPAGTDRHPVV
GEFEENPLIGTGIVTTLPTLVAAGYPESDNQLIIDTDGSPGVHERLDAVVADLPVVSVKDQAEFAAEQREPIDQLVLMIY
ALLGLALVIAVLGIVNTLALSVIERTRELGLLRAIGVSRRQLRRMIGLESVVIAVLGAVLGLLLGLCFGVVLMYALRDEG
LEVISVPGVQLVVFLVLSIVIGFLAAVFPARRAARLDVLQAIAAE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=129, Percent_Identity=34.1085271317829, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 87975; Mature: 87975

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKAALRSLLGRKLRLLMSTFAIVLGVAFVAGSLIFSDMLNRSFTAIFASTVGDVIVRPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCC
GGASLDGTPSTLTVPSDLLPRLESVPGAARVDGNVSAVGVFVVSRENKLIGGNGAPGIGV
CCCCCCCCCCEEECCHHHHHHHHCCCCCEEECCCCEEEEEEEEECCCEEECCCCCCCCCC
NWNDAPAGHGLEGLSVVEGRVPEGADEVALDVAAADKAGYAVGDTIRVITSTDTPVLQPE
CCCCCCCCCCCCCCHHHCCCCCCCCHHHEEEHHHCCCCCCEECCEEEEEECCCCCCCCHH
LVGLVDFADGGSLNGATLTVFDTTTARDLFLGGEDAYTDVWVTAEGGTSQAELRDRVREV
HHEEEEECCCCCCCCCEEEEEECCCHHHEEECCCCCCEEEEEEECCCCCHHHHHHHHHHH
LPGDLEAITGDDAADESGNLLLEAVSFITTFLLIFAGIALVVGAFLIANTFSILVAQRSR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELALLRALGASQRQVTRSVLVEAAVVGALGSTLGLGLGVLLALAIRAMFEQVGLDLSGQG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
IIFAPRTVIAGYAVGVLITMAAAWLPARRTARIAPVQALRDDVALPESSIHRRLVAGVVQ
EEEECHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LVVGAVALTAGLFFDVPRAGWLVGVGVLLIFLGVATASPVIARPVLHLFGVLYRRAFGPV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
GNLAGENARRNPRRTTATASALMIGLALATTMAILGASAKASVDRIIEDNFVGDFVVGNV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH
VGQGFSPAIGDQMARVDGVEAVVRQRYVPMEVDGDDTYVSGVDPHDLSGLLDLTMTEGSR
HCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCCHHCCHHEEEEECCCCC
DDLVDGSVLVSEEYAADHGVAVGDQIELDTPAGTDRHPVVGEFEENPLIGTGIVTTLPTL
CCCCCCCEEEEHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VAAGYPESDNQLIIDTDGSPGVHERLDAVVADLPVVSVKDQAEFAAEQREPIDQLVLMIY
HHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHCCCHHHHHHHHH
ALLGLALVIAVLGIVNTLALSVIERTRELGLLRAIGVSRRQLRRMIGLESVVIAVLGAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLLGLCFGVVLMYALRDEGLEVISVPGVQLVVFLVLSIVIGFLAAVFPARRAARLDVLQ
HHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAAE
HHHCC
>Mature Secondary Structure
MIKAALRSLLGRKLRLLMSTFAIVLGVAFVAGSLIFSDMLNRSFTAIFASTVGDVIVRPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCC
GGASLDGTPSTLTVPSDLLPRLESVPGAARVDGNVSAVGVFVVSRENKLIGGNGAPGIGV
CCCCCCCCCCEEECCHHHHHHHHCCCCCEEECCCCEEEEEEEEECCCEEECCCCCCCCCC
NWNDAPAGHGLEGLSVVEGRVPEGADEVALDVAAADKAGYAVGDTIRVITSTDTPVLQPE
CCCCCCCCCCCCCCHHHCCCCCCCCHHHEEEHHHCCCCCCEECCEEEEEECCCCCCCCHH
LVGLVDFADGGSLNGATLTVFDTTTARDLFLGGEDAYTDVWVTAEGGTSQAELRDRVREV
HHEEEEECCCCCCCCCEEEEEECCCHHHEEECCCCCCEEEEEEECCCCCHHHHHHHHHHH
LPGDLEAITGDDAADESGNLLLEAVSFITTFLLIFAGIALVVGAFLIANTFSILVAQRSR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELALLRALGASQRQVTRSVLVEAAVVGALGSTLGLGLGVLLALAIRAMFEQVGLDLSGQG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
IIFAPRTVIAGYAVGVLITMAAAWLPARRTARIAPVQALRDDVALPESSIHRRLVAGVVQ
EEEECHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LVVGAVALTAGLFFDVPRAGWLVGVGVLLIFLGVATASPVIARPVLHLFGVLYRRAFGPV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
GNLAGENARRNPRRTTATASALMIGLALATTMAILGASAKASVDRIIEDNFVGDFVVGNV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH
VGQGFSPAIGDQMARVDGVEAVVRQRYVPMEVDGDDTYVSGVDPHDLSGLLDLTMTEGSR
HCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCCHHCCHHEEEEECCCCC
DDLVDGSVLVSEEYAADHGVAVGDQIELDTPAGTDRHPVVGEFEENPLIGTGIVTTLPTL
CCCCCCCEEEEHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VAAGYPESDNQLIIDTDGSPGVHERLDAVVADLPVVSVKDQAEFAAEQREPIDQLVLMIY
HHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHCCCHHHHHHHHH
ALLGLALVIAVLGIVNTLALSVIERTRELGLLRAIGVSRRQLRRMIGLESVVIAVLGAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLLGLCFGVVLMYALRDEGLEVISVPGVQLVVFLVLSIVIGFLAAVFPARRAARLDVLQ
HHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAAE
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]