| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is ina [H]
Identifier: 119718158
GI number: 119718158
Start: 4147148
End: 4149625
Strand: Reverse
Name: ina [H]
Synonym: Noca_3939
Alternate gene names: 119718158
Gene position: 4149625-4147148 (Counterclockwise)
Preceding gene: 119718159
Following gene: 119718157
Centisome position: 83.23
GC content: 69.29
Gene sequence:
>2478_bases GTGATCTCGGCACCGCAACCCGTGTGTCGCGCACCTCGGGAGGCTTTCGGGCGTATCTCGCCCCGACATCACGGGAGGCA TCTTTTGCGAAGGACCCGGGTCGCCGCCACGGCGACCGCATCACTGATCGCGGCAGCCACGGCGCTGTCGCTCACCACCA CCCCCCAGGCCGGCGCCACCCCGCCGGCTGCGGACCGGGCCACGAAGGCGGATCGGGGCACCCCCTCGGACGTCCTCACG CCGGGCTGGAAGACGAAGTACCACGAGCGGACCCAGGCCGCCCTCGAGAAGCGGCTGCGCACCGGCGGCAAGGGGCAGGC CGAGAAGCTCGGCAAGGGCGTCTACGGCCGGGTCGCGCAGACCGGCAAGGACCGGATCTTCGTCGTGCTGGCCGAGTTCG GCGACCGCCGGCACCAGGCCTACCAGGACGACCCGGACTCCGGCGCCCAGCGGTACGACGGCCCGCTGCACAACCAGATC CCGAAGCCGAACCGCAAGAAGGACAACTCGACGCTCTGGAACGCGGACTTCAGCAGGTCCTACTTCCAGAACATGTACTT CAACCGGATGCGGGACTTCTTCGAGGACCAGTCCAGCGGCCAGTACTCCATCGACGGTGACGTCACCGCCTGGGTGAAGG TCCCCTTCAACGAGGCCCGCTACGGCAGCAACAAGGACTGCGGGTACATCGTCTGCGGCAACGTCAACTTCCTCATCCGG GACGCGCTCTCGGAGTGGGTGCAGGGTCGCCTCGACGCCGGCTGGACGATGGCGCGGATCCAGGACTACCTGAAGACCTT CGACGTGCAGGACCGCTACGACTTCGACGGGGACGGCGACTTCCGCGAGCCGGACGGCTACCTCGACCACTTCCAGATCG TCCACGCGGGCGGCGACGAGGCGGACGGTGACCCGGTCTACGGCTCGGACGCGATCTGGAGCCACCGCGGCAACGCCGCC CTGCACGGTCTCGGGGAGGGCCCGGGCCCGGCCATCGGCGGCATCCAGGTCGGCGAGGGCGGCAAGAGCGACGGCTCGGC GCCGGACGGCGGCGTGGTCTTCCCCGACAACCCGACCGGGCTGTGGGTCAGCGACTACACGATGCAGCCCGAGAACGGCG GCCTCAGCGTCTTCGCCCACGAGTACACCCACGACCTCGAGCTCCCCGACCTGTACGACACCTCCGGCAACACCGGCGGT GCCAGCAACAGCGTCGAGCACTGGTCGCTGATGGCCCAGTCCCGCGGCACCGCGAAGCGGGACGCCGGCATCGGCGACCG CCCGCAGCCGATGGGCGCGTGGGAGAAGTTCCAGCTCGGCTGGCTCGACTACGACACCATCAACGCCGGCCACTCCGGCA CCTTCCGGCTGCGTCCGGGCGCCTCGACGACCGGCTCGCAGGCCAACGGCCTGATCGTGCTGCTGCCGGACAAGGACGTC ACCTTCCAGTACGGCGAGCCCTGCGCGGAGTGCGGCGAGCGCTTCTACTTCAGCGGCAGCGGCGACAACCTCGACCAGAC CATGACCCGCACGGTCGAGGGCGGCGGCGAGCTGACCGCCAAGGTGCGCTACGACATCGAGCCCGGTTGGGACTACGCGT TCCTCGAGGTGTCCAGCGACGGTGGTGAGACCTGGACCTCGATCCCGACCAGCGAGAGCTACACGGAGCCGGACCAGGGC TCGTTCAACCCCGACGGCACCGGCATCAGCGGCACCACCGACGGCGCCTGGGTCGACCTGACGGCCACCGTGCCCGACGG CACCAACGCGGTGCGCTGGCGCTACCTGACCGACGGTGCGGCGGCGTACCCCGGCTTCCAGGTCGACAACATCACTCTCG CGGGTGCGTCGATCGGGACCGCCGAGACCGACGACGAGGGCTGGGTGATGGACGGCTTCGAGGCGGTCCACTCCGAGGAG ACCCGGGCGTTCTTGAACACCTACTTCGTGGACAACCGGCAGTACGTCGGCCGCGACCGGGTGCTCGCGCACGTCTACAA CTTCGCGGGCTTCGAGAAGCGGCCCGACTGGGTCGACTTCTTCGCTTACCAGCCCGGTGCGCTGATCAGCTACTGGGACA CCTCGTACGCCGACAACAACGTCGGCGACCACCCCGGTCACGGCGAGGTGCTCCCCGTGGACGCGCGTCCCACGTTCCAG CACGCCTTCGACGGGTCGATCCTGCGCCCGAAGGTGCTGACCGCGGACTCGACGTTCTCGCGGCGCCCGAGCCCGTCGCA GAAGCTGCACTACCGCGGCCACGCCTACACCCTGAAGAGCCAGTCCGCGGTGCCGTTGTTCGACGACACCCTGGATTGGT GGTTCGGCGGCGACGAGCACGGCTCCGGCGACCACCCCGGCTTCTACGAGCCCGAGTGGTACAGCGTCGACGTGCCCAAG ACCGGCACCACGATCCGCGTGGTCAAGGTCAACAGCAGGACCGGTGTGATGACCGTCCGGGTCGGCACCTCCAGCTGA
Upstream 100 bases:
>100_bases CCCGACGCCGGGCCGCCCGTTCGATAACGGTCCGATAACGAACCCGAGCGCCTCTTCCGTCGTCTGGCGCCGGGCGTGTC GACTGCTCTCCTCCCCGTCG
Downstream 100 bases:
>100_bases TCTGCTCCATCCCCAGCGGGCCCCGCCACCACGTGGCGGGGCCCGCTCTCGTTCGACCCGTTGGTCGAGCTTCTCGACCG GCTCGATCATCGGGGAGCGC
Product: peptidase M6, immune inhibitor A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 825; Mature: 825
Protein sequence:
>825_residues MISAPQPVCRAPREAFGRISPRHHGRHLLRRTRVAATATASLIAAATALSLTTTPQAGATPPAADRATKADRGTPSDVLT PGWKTKYHERTQAALEKRLRTGGKGQAEKLGKGVYGRVAQTGKDRIFVVLAEFGDRRHQAYQDDPDSGAQRYDGPLHNQI PKPNRKKDNSTLWNADFSRSYFQNMYFNRMRDFFEDQSSGQYSIDGDVTAWVKVPFNEARYGSNKDCGYIVCGNVNFLIR DALSEWVQGRLDAGWTMARIQDYLKTFDVQDRYDFDGDGDFREPDGYLDHFQIVHAGGDEADGDPVYGSDAIWSHRGNAA LHGLGEGPGPAIGGIQVGEGGKSDGSAPDGGVVFPDNPTGLWVSDYTMQPENGGLSVFAHEYTHDLELPDLYDTSGNTGG ASNSVEHWSLMAQSRGTAKRDAGIGDRPQPMGAWEKFQLGWLDYDTINAGHSGTFRLRPGASTTGSQANGLIVLLPDKDV TFQYGEPCAECGERFYFSGSGDNLDQTMTRTVEGGGELTAKVRYDIEPGWDYAFLEVSSDGGETWTSIPTSESYTEPDQG SFNPDGTGISGTTDGAWVDLTATVPDGTNAVRWRYLTDGAAAYPGFQVDNITLAGASIGTAETDDEGWVMDGFEAVHSEE TRAFLNTYFVDNRQYVGRDRVLAHVYNFAGFEKRPDWVDFFAYQPGALISYWDTSYADNNVGDHPGHGEVLPVDARPTFQ HAFDGSILRPKVLTADSTFSRRPSPSQKLHYRGHAYTLKSQSAVPLFDDTLDWWFGGDEHGSGDHPGFYEPEWYSVDVPK TGTTIRVVKVNSRTGVMTVRVGTSS
Sequences:
>Translated_825_residues MISAPQPVCRAPREAFGRISPRHHGRHLLRRTRVAATATASLIAAATALSLTTTPQAGATPPAADRATKADRGTPSDVLT PGWKTKYHERTQAALEKRLRTGGKGQAEKLGKGVYGRVAQTGKDRIFVVLAEFGDRRHQAYQDDPDSGAQRYDGPLHNQI PKPNRKKDNSTLWNADFSRSYFQNMYFNRMRDFFEDQSSGQYSIDGDVTAWVKVPFNEARYGSNKDCGYIVCGNVNFLIR DALSEWVQGRLDAGWTMARIQDYLKTFDVQDRYDFDGDGDFREPDGYLDHFQIVHAGGDEADGDPVYGSDAIWSHRGNAA LHGLGEGPGPAIGGIQVGEGGKSDGSAPDGGVVFPDNPTGLWVSDYTMQPENGGLSVFAHEYTHDLELPDLYDTSGNTGG ASNSVEHWSLMAQSRGTAKRDAGIGDRPQPMGAWEKFQLGWLDYDTINAGHSGTFRLRPGASTTGSQANGLIVLLPDKDV TFQYGEPCAECGERFYFSGSGDNLDQTMTRTVEGGGELTAKVRYDIEPGWDYAFLEVSSDGGETWTSIPTSESYTEPDQG SFNPDGTGISGTTDGAWVDLTATVPDGTNAVRWRYLTDGAAAYPGFQVDNITLAGASIGTAETDDEGWVMDGFEAVHSEE TRAFLNTYFVDNRQYVGRDRVLAHVYNFAGFEKRPDWVDFFAYQPGALISYWDTSYADNNVGDHPGHGEVLPVDARPTFQ HAFDGSILRPKVLTADSTFSRRPSPSQKLHYRGHAYTLKSQSAVPLFDDTLDWWFGGDEHGSGDHPGFYEPEWYSVDVPK TGTTIRVVKVNSRTGVMTVRVGTSS >Mature_825_residues MISAPQPVCRAPREAFGRISPRHHGRHLLRRTRVAATATASLIAAATALSLTTTPQAGATPPAADRATKADRGTPSDVLT PGWKTKYHERTQAALEKRLRTGGKGQAEKLGKGVYGRVAQTGKDRIFVVLAEFGDRRHQAYQDDPDSGAQRYDGPLHNQI PKPNRKKDNSTLWNADFSRSYFQNMYFNRMRDFFEDQSSGQYSIDGDVTAWVKVPFNEARYGSNKDCGYIVCGNVNFLIR DALSEWVQGRLDAGWTMARIQDYLKTFDVQDRYDFDGDGDFREPDGYLDHFQIVHAGGDEADGDPVYGSDAIWSHRGNAA LHGLGEGPGPAIGGIQVGEGGKSDGSAPDGGVVFPDNPTGLWVSDYTMQPENGGLSVFAHEYTHDLELPDLYDTSGNTGG ASNSVEHWSLMAQSRGTAKRDAGIGDRPQPMGAWEKFQLGWLDYDTINAGHSGTFRLRPGASTTGSQANGLIVLLPDKDV TFQYGEPCAECGERFYFSGSGDNLDQTMTRTVEGGGELTAKVRYDIEPGWDYAFLEVSSDGGETWTSIPTSESYTEPDQG SFNPDGTGISGTTDGAWVDLTATVPDGTNAVRWRYLTDGAAAYPGFQVDNITLAGASIGTAETDDEGWVMDGFEAVHSEE TRAFLNTYFVDNRQYVGRDRVLAHVYNFAGFEKRPDWVDFFAYQPGALISYWDTSYADNNVGDHPGHGEVLPVDARPTFQ HAFDGSILRPKVLTADSTFSRRPSPSQKLHYRGHAYTLKSQSAVPLFDDTLDWWFGGDEHGSGDHPGFYEPEWYSVDVPK TGTTIRVVKVNSRTGVMTVRVGTSS
Specific function: Neutral metalloprotease that is secreted to degrade antibacterial proteins produced by the insect host for its defense (attacins and cecropins). Probably degrades some unknown crucial protein(s) too, since it is toxic when injected to insect larvae [H]
COG id: COG4412
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012300 - InterPro: IPR008757 [H]
Pfam domain/function: PF05547 Peptidase_M6 [H]
EC number: NA
Molecular weight: Translated: 90400; Mature: 90400
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISAPQPVCRAPREAFGRISPRHHGRHLLRRTRVAATATASLIAAATALSLTTTPQAGAT CCCCCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC PPAADRATKADRGTPSDVLTPGWKTKYHERTQAALEKRLRTGGKGQAEKLGKGVYGRVAQ CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHH TGKDRIFVVLAEFGDRRHQAYQDDPDSGAQRYDGPLHNQIPKPNRKKDNSTLWNADFSRS CCCCEEEEEEECCCCHHHHCCCCCCCCCHHHCCCCHHHCCCCCCCCCCCCEEECCCHHHH YFQNMYFNRMRDFFEDQSSGQYSIDGDVTAWVKVPFNEARYGSNKDCGYIVCGNVNFLIR HHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCHHCCCCCCCCCCEEEECCCCHHHH DALSEWVQGRLDAGWTMARIQDYLKTFDVQDRYDFDGDGDFREPDGYLDHFQIVHAGGDE HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC ADGDPVYGSDAIWSHRGNAALHGLGEGPGPAIGGIQVGEGGKSDGSAPDGGVVFPDNPTG CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCEEECCCCCE LWVSDYTMQPENGGLSVFAHEYTHDLELPDLYDTSGNTGGASNSVEHWSLMAQSRGTAKR EEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHH DAGIGDRPQPMGAWEKFQLGWLDYDTINAGHSGTFRLRPGASTTGSQANGLIVLLPDKDV CCCCCCCCCCCCCCCEEEECEEECCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCC TFQYGEPCAECGERFYFSGSGDNLDQTMTRTVEGGGELTAKVRYDIEPGWDYAFLEVSSD EEECCCHHHHHCCEEEECCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEECC GGETWTSIPTSESYTEPDQGSFNPDGTGISGTTDGAWVDLTATVPDGTNAVRWRYLTDGA CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCC AAYPGFQVDNITLAGASIGTAETDDEGWVMDGFEAVHSEETRAFLNTYFVDNRQYVGRDR CCCCCEEECCEEEECCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHEEECCCHHCCHHH VLAHVYNFAGFEKRPDWVDFFAYQPGALISYWDTSYADNNVGDHPGHGEVLPVDARPTFQ HHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCHH HAFDGSILRPKVLTADSTFSRRPSPSQKLHYRGHAYTLKSQSAVPLFDDTLDWWFGGDEH HHCCCCCCCCEEEECCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCCCHHHHCCCCCC GSGDHPGFYEPEWYSVDVPKTGTTIRVVKVNSRTGVMTVRVGTSS CCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCEEEEEECCCC >Mature Secondary Structure MISAPQPVCRAPREAFGRISPRHHGRHLLRRTRVAATATASLIAAATALSLTTTPQAGAT CCCCCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC PPAADRATKADRGTPSDVLTPGWKTKYHERTQAALEKRLRTGGKGQAEKLGKGVYGRVAQ CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHH TGKDRIFVVLAEFGDRRHQAYQDDPDSGAQRYDGPLHNQIPKPNRKKDNSTLWNADFSRS CCCCEEEEEEECCCCHHHHCCCCCCCCCHHHCCCCHHHCCCCCCCCCCCCEEECCCHHHH YFQNMYFNRMRDFFEDQSSGQYSIDGDVTAWVKVPFNEARYGSNKDCGYIVCGNVNFLIR HHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCHHCCCCCCCCCCEEEECCCCHHHH DALSEWVQGRLDAGWTMARIQDYLKTFDVQDRYDFDGDGDFREPDGYLDHFQIVHAGGDE HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC ADGDPVYGSDAIWSHRGNAALHGLGEGPGPAIGGIQVGEGGKSDGSAPDGGVVFPDNPTG CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCEEECCCCCE LWVSDYTMQPENGGLSVFAHEYTHDLELPDLYDTSGNTGGASNSVEHWSLMAQSRGTAKR EEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHH DAGIGDRPQPMGAWEKFQLGWLDYDTINAGHSGTFRLRPGASTTGSQANGLIVLLPDKDV CCCCCCCCCCCCCCCEEEECEEECCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCC TFQYGEPCAECGERFYFSGSGDNLDQTMTRTVEGGGELTAKVRYDIEPGWDYAFLEVSSD EEECCCHHHHHCCEEEECCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEECC GGETWTSIPTSESYTEPDQGSFNPDGTGISGTTDGAWVDLTATVPDGTNAVRWRYLTDGA CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCC AAYPGFQVDNITLAGASIGTAETDDEGWVMDGFEAVHSEETRAFLNTYFVDNRQYVGRDR CCCCCEEECCEEEECCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHEEECCCHHCCHHH VLAHVYNFAGFEKRPDWVDFFAYQPGALISYWDTSYADNNVGDHPGHGEVLPVDARPTFQ HHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCHH HAFDGSILRPKVLTADSTFSRRPSPSQKLHYRGHAYTLKSQSAVPLFDDTLDWWFGGDEH HHCCCCCCCCEEEECCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCCCHHHHCCCCCC GSGDHPGFYEPEWYSVDVPKTGTTIRVVKVNSRTGVMTVRVGTSS CCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2089225; 6421577 [H]