| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119718157
Identifier: 119718157
GI number: 119718157
Start: 4146439
End: 4146849
Strand: Reverse
Name: 119718157
Synonym: Noca_3938
Alternate gene names: NA
Gene position: 4146849-4146439 (Counterclockwise)
Preceding gene: 119718158
Following gene: 119718156
Centisome position: 83.17
GC content: 70.07
Gene sequence:
>411_bases ATGAGCTTCGAGTACGAGCACACCGTGACCACGACCGCGACTCCCGGCGACGTCTGGGCGCTCTGGAGCAACGTGGGCTG CTGGCATCGCTGGGACCCGGCGGTCGATCAGGTCGCCATCGAGGGGCACTTCGGCGAGGGTGCTGCGGGCACGCTGGTGC TCACCAGCGGCGTGGAGGCGCCGTTCATCCTCGAGATCGTCGAGCCGTGCGCGCGCTATCTCGATCGGGTGACCCTGGGC GACCTGGTGGTCCGGATCGACCACCAGGTCAAGGAGACCGCCGAAGGCTCCGAGATCACGGTACGCACCACCATCGAGGG CCCCGCGGCGGAGGAGGTCGGGCCGATGGTCACCGCCGACACCCCGCGCGCGCTCGAGACGCTGGTCGCCATGGCCGAGA AGCGCCCCTGA
Upstream 100 bases:
>100_bases CTCGGGCACCGACCGGCCAGTGACCGGGCCGACATCCGGGCGGCTGATGGGCGGCTGCGAACCGGCCCACCGGGCGCCCG GTCGTATTAGGTTGCTGTGC
Downstream 100 bases:
>100_bases CACCTGCCCGACCGACGACAGCCGCGCGCGGTCGGGCGTAGGTTGCCGGCATGGAGGCCTACGCGAAGGGCGAGCTCGAG CCGCCCCTCCTCGAGGAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSFEYEHTVTTTATPGDVWALWSNVGCWHRWDPAVDQVAIEGHFGEGAAGTLVLTSGVEAPFILEIVEPCARYLDRVTLG DLVVRIDHQVKETAEGSEITVRTTIEGPAAEEVGPMVTADTPRALETLVAMAEKRP
Sequences:
>Translated_136_residues MSFEYEHTVTTTATPGDVWALWSNVGCWHRWDPAVDQVAIEGHFGEGAAGTLVLTSGVEAPFILEIVEPCARYLDRVTLG DLVVRIDHQVKETAEGSEITVRTTIEGPAAEEVGPMVTADTPRALETLVAMAEKRP >Mature_135_residues SFEYEHTVTTTATPGDVWALWSNVGCWHRWDPAVDQVAIEGHFGEGAAGTLVLTSGVEAPFILEIVEPCARYLDRVTLGD LVVRIDHQVKETAEGSEITVRTTIEGPAAEEVGPMVTADTPRALETLVAMAEKRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14761; Mature: 14630
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFEYEHTVTTTATPGDVWALWSNVGCWHRWDPAVDQVAIEGHFGEGAAGTLVLTSGVEA CCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCC PFILEIVEPCARYLDRVTLGDLVVRIDHQVKETAEGSEITVRTTIEGPAAEEVGPMVTAD CHHHHHHHHHHHHHHCCCHHHHHEEHHHHHHHCCCCCEEEEEEEECCCCCHHCCCEEECC TPRALETLVAMAEKRP CHHHHHHHHHHHHCCC >Mature Secondary Structure SFEYEHTVTTTATPGDVWALWSNVGCWHRWDPAVDQVAIEGHFGEGAAGTLVLTSGVEA CCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCC PFILEIVEPCARYLDRVTLGDLVVRIDHQVKETAEGSEITVRTTIEGPAAEEVGPMVTAD CHHHHHHHHHHHHHHCCCHHHHHEEHHHHHHHCCCCCEEEEEEEECCCCCHHCCCEEECC TPRALETLVAMAEKRP CHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA