| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718001
Identifier: 119718001
GI number: 119718001
Start: 3999529
End: 3999774
Strand: Reverse
Name: 119718001
Synonym: Noca_3779
Alternate gene names: NA
Gene position: 3999774-3999529 (Counterclockwise)
Preceding gene: 119718002
Following gene: 119718000
Centisome position: 80.22
GC content: 71.95
Gene sequence:
>246_bases ATGTCACCTCGTTGGCCCGTGAACGTCACCCCACCGGAACGGGTGGCGAGGATCGTGATCGGCGCGGCCGCCGCGGTCGG CGGCGTCGCCCTGCTGACCGCAGGACCGGGCATCATCGTGCTCGTCCTGGAGGTGCTGCTGGTGCTCGCCGGCCTCGACC TGGTGGTCACCGGCGCAGTCGGGCACTGCCCGCTCTACGCCCGGCTCCACCACGTGCCGTCCTCGCTCGAGGGGAGCACC CGATGA
Upstream 100 bases:
>100_bases CAACGAACCTTCACGCCAACGCAGCACTGATCTTCAAGGGCGCCGCCGACAGTGGAGCCAGGACCCGACTAGCGGGTCGA GAACAAGTTCGGAGGCTGTC
Downstream 100 bases:
>100_bases CCGAGCGGGCCGGCGGCGTGGCGTCGTACGGCGGGTCGGAGGAACGCATTCCTTCCGCCGAGGGCAGCCTGCTCCGGCAC GACCAGCACCTCCCGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MSPRWPVNVTPPERVARIVIGAAAAVGGVALLTAGPGIIVLVLEVLLVLAGLDLVVTGAVGHCPLYARLHHVPSSLEGST R
Sequences:
>Translated_81_residues MSPRWPVNVTPPERVARIVIGAAAAVGGVALLTAGPGIIVLVLEVLLVLAGLDLVVTGAVGHCPLYARLHHVPSSLEGST R >Mature_80_residues SPRWPVNVTPPERVARIVIGAAAAVGGVALLTAGPGIIVLVLEVLLVLAGLDLVVTGAVGHCPLYARLHHVPSSLEGSTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8266; Mature: 8135
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRWPVNVTPPERVARIVIGAAAAVGGVALLTAGPGIIVLVLEVLLVLAGLDLVVTGAV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCHHHEEECCC GHCPLYARLHHVPSSLEGSTR CCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SPRWPVNVTPPERVARIVIGAAAAVGGVALLTAGPGIIVLVLEVLLVLAGLDLVVTGAV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCHHHEEECCC GHCPLYARLHHVPSSLEGSTR CCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA