| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is idnK [H]
Identifier: 119717944
GI number: 119717944
Start: 3949253
End: 3949735
Strand: Reverse
Name: idnK [H]
Synonym: Noca_3722
Alternate gene names: 119717944
Gene position: 3949735-3949253 (Counterclockwise)
Preceding gene: 119717945
Following gene: 119717943
Centisome position: 79.22
GC content: 72.05
Gene sequence:
>483_bases ATGCATCCCCTGGTCGTGATCGGTGTCTCGGGCTCGGGCAAGTCGACCGTGGGGGCAGCGTTGGCCCAGCGACTCCGCGT GCCGTACGAGGACGCCGACGACCTGCATCCGCCGGAGAACGTCGCGAAGATGAGCGCGGGGCACGCGCTCGACGACGACG ACCGCTACCCCTGGCTGGAGGCGGTCGGCGGCTGGCTCGCCGAGCATCCGGACGGCGGCGTGATGGCCTGCTCCGCGCTC AGACGGAAGTACCGCGACCAGCTGCGCCGACACGCGCCCGTCGTGGAGTTCGTGCTGCTGGAGGGGACCCCCGAGGTGAT CGGCCGGCGCCAGGCCAGCCGACCCGGCCACTTCATGCCGGCCTCGCTGCTGGCCTCGCAGTTCGCCACCCTCGAGCCGC TCGAGCCGGACGAGCGGGGGGTGGTCATCGACGTCGACCAGAGCGTCGAGGCGATCGTCGACGCGATCGTCGGACGGCCC TGA
Upstream 100 bases:
>100_bases CGCGCGGCACGCCATGCTGCGCCACGGTGGGGCCTTCGAGCGCGCGGCCGCCCGGTTCGCGGTGGCGACCCTGCTGGACG TCACGGGTTAGCGTGCGAGG
Downstream 100 bases:
>100_bases GGTCGGATGCCGCGCCGCGCGTTCCTCCGGGAACGGGTGGCGCAGGCGGAATCAGCGCGTCCGGGACGGTGTTGGGCCCG GTATGAGCGAGAAGCAGGTG
Product: gluconate kinase
Products: NA
Alternate protein names: Gluconate kinase 1 [H]
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MHPLVVIGVSGSGKSTVGAALAQRLRVPYEDADDLHPPENVAKMSAGHALDDDDRYPWLEAVGGWLAEHPDGGVMACSAL RRKYRDQLRRHAPVVEFVLLEGTPEVIGRRQASRPGHFMPASLLASQFATLEPLEPDERGVVIDVDQSVEAIVDAIVGRP
Sequences:
>Translated_160_residues MHPLVVIGVSGSGKSTVGAALAQRLRVPYEDADDLHPPENVAKMSAGHALDDDDRYPWLEAVGGWLAEHPDGGVMACSAL RRKYRDQLRRHAPVVEFVLLEGTPEVIGRRQASRPGHFMPASLLASQFATLEPLEPDERGVVIDVDQSVEAIVDAIVGRP >Mature_160_residues MHPLVVIGVSGSGKSTVGAALAQRLRVPYEDADDLHPPENVAKMSAGHALDDDDRYPWLEAVGGWLAEHPDGGVMACSAL RRKYRDQLRRHAPVVEFVLLEGTPEVIGRRQASRPGHFMPASLLASQFATLEPLEPDERGVVIDVDQSVEAIVDAIVGRP
Specific function: Gluconate utilization system GNT-II. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=175, Percent_Identity=44.5714285714286, Blast_Score=121, Evalue=3e-28, Organism=Escherichia coli, GI1790719, Length=155, Percent_Identity=41.9354838709677, Blast_Score=130, Evalue=3e-32, Organism=Escherichia coli, GI87082265, Length=160, Percent_Identity=40.625, Blast_Score=127, Evalue=3e-31, Organism=Caenorhabditis elegans, GI25146487, Length=164, Percent_Identity=49.390243902439, Blast_Score=155, Evalue=8e-39, Organism=Saccharomyces cerevisiae, GI6320454, Length=143, Percent_Identity=39.1608391608392, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 17334; Mature: 17334
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPLVVIGVSGSGKSTVGAALAQRLRVPYEDADDLHPPENVAKMSAGHALDDDDRYPWLE CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHH AVGGWLAEHPDGGVMACSALRRKYRDQLRRHAPVVEFVLLEGTPEVIGRRQASRPGHFMP HHCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCCCCCCCCC ASLLASQFATLEPLEPDERGVVIDVDQSVEAIVDAIVGRP HHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHCCC >Mature Secondary Structure MHPLVVIGVSGSGKSTVGAALAQRLRVPYEDADDLHPPENVAKMSAGHALDDDDRYPWLE CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHH AVGGWLAEHPDGGVMACSALRRKYRDQLRRHAPVVEFVLLEGTPEVIGRRQASRPGHFMP HHCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCCCCCCCCC ASLLASQFATLEPLEPDERGVVIDVDQSVEAIVDAIVGRP HHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 9658018 [H]