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The map label for this gene is ycbL [C]

Identifier: 119717872

GI number: 119717872

Start: 3874935

End: 3875558

Strand: Reverse

Name: ycbL [C]

Synonym: Noca_3650

Alternate gene names: 119717872

Gene position: 3875558-3874935 (Counterclockwise)

Preceding gene: 119717873

Following gene: 119717871

Centisome position: 77.73

GC content: 71.31

Gene sequence:

>624_bases
ATGGCCGGGCCGGGCCCGGCGCGGGTCGACCACGCGGTGTCCTCCGGAACGTTCAGCCTCGACGGGGAGACGTTCGAGGT
CGAGAACAACATCTGGGTCGTGGGCGACGACGCCGAGTGCGTCGTGATCGACGCGCCGCACGACGTCGCCGACATCCTGG
CCGTCGTGGGGGACCGGAAGGTGAAGGCGATCGTGTGCACGCACGCGCATGACGACCACGTCCGGGTCGCTCCGGCGCTG
CGGGAGGAGGTCGTGGCGCCGATCATGCTGCACCCGGCCGACCGCCCGCTGTGGGAGCTCACGCACACCCGCTACCTCTG
GGACCTCGACCTCGAGGACGGCCTGGAGATCGAGGTCGGTGGCACCAGCCTGCGGGTGCTGCACACCCCCGGGCACGCGC
CGGGCGCGGTCTGCCTGTACGCCTCGGACCTGGGCTGCGTCTTCACCGGGGACACCCTGTTCCAGGGTGGTCCCGGGGCC
ACTGGACGGTCGTTCTCCGACGCCGACCTGATCGTGGAGTCGATCCGGACGACGCTGTTCGCGCTGCCCGACGACACGGT
CGTCCACACCGGTCACGGCGCGGACACCACGATCGGCGCCGAACGGGTGGGACTCGGGTCCTGA

Upstream 100 bases:

>100_bases
TGGACGCCTTCGTCAGCGAGGAGATCGGCATCGGCGACGTCGAGGCGGCGTTCGAGCGGATGCACGAGGGCGGCGTGTTG
CGCTCGGTGGTGATCCTCTG

Downstream 100 bases:

>100_bases
CCCGGACCGGGACGGGTCCCAGCGCCCGGGGCGCCGAAAGTCCCTTCAGATCGGGACCGTTGTGCCCTCCGATGCGAGGA
CTCCGGCCCTGATTGGTGGA

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAGPGPARVDHAVSSGTFSLDGETFEVENNIWVVGDDAECVVIDAPHDVADILAVVGDRKVKAIVCTHAHDDHVRVAPAL
REEVVAPIMLHPADRPLWELTHTRYLWDLDLEDGLEIEVGGTSLRVLHTPGHAPGAVCLYASDLGCVFTGDTLFQGGPGA
TGRSFSDADLIVESIRTTLFALPDDTVVHTGHGADTTIGAERVGLGS

Sequences:

>Translated_207_residues
MAGPGPARVDHAVSSGTFSLDGETFEVENNIWVVGDDAECVVIDAPHDVADILAVVGDRKVKAIVCTHAHDDHVRVAPAL
REEVVAPIMLHPADRPLWELTHTRYLWDLDLEDGLEIEVGGTSLRVLHTPGHAPGAVCLYASDLGCVFTGDTLFQGGPGA
TGRSFSDADLIVESIRTTLFALPDDTVVHTGHGADTTIGAERVGLGS
>Mature_206_residues
AGPGPARVDHAVSSGTFSLDGETFEVENNIWVVGDDAECVVIDAPHDVADILAVVGDRKVKAIVCTHAHDDHVRVAPALR
EEVVAPIMLHPADRPLWELTHTRYLWDLDLEDGLEIEVGGTSLRVLHTPGHAPGAVCLYASDLGCVFTGDTLFQGGPGAT
GRSFSDADLIVESIRTTLFALPDDTVVHTGHGADTTIGAERVGLGS

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Escherichia coli, GI1787158, Length=155, Percent_Identity=30.3225806451613, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 21876; Mature: 21744

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPGPARVDHAVSSGTFSLDGETFEVENNIWVVGDDAECVVIDAPHDVADILAVVGDRK
CCCCCCCCHHHHHCCCEEEECCCEEEECCCEEEEECCCCEEEEECCCCHHHHHHHHCCCC
VKAIVCTHAHDDHVRVAPALREEVVAPIMLHPADRPLWELTHTRYLWDLDLEDGLEIEVG
EEEEEEECCCCCCEEECHHHHHHHCCCEEECCCCCCHHEECCEEEEEEECCCCCCEEEEC
GTSLRVLHTPGHAPGAVCLYASDLGCVFTGDTLFQGGPGATGRSFSDADLIVESIRTTLF
CCEEEEEECCCCCCCEEEEEECCCCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHEE
ALPDDTVVHTGHGADTTIGAERVGLGS
ECCCCCEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGPGPARVDHAVSSGTFSLDGETFEVENNIWVVGDDAECVVIDAPHDVADILAVVGDRK
CCCCCCCHHHHHCCCEEEECCCEEEECCCEEEEECCCCEEEEECCCCHHHHHHHHCCCC
VKAIVCTHAHDDHVRVAPALREEVVAPIMLHPADRPLWELTHTRYLWDLDLEDGLEIEVG
EEEEEEECCCCCCEEECHHHHHHHCCCEEECCCCCCHHEECCEEEEEEECCCCCCEEEEC
GTSLRVLHTPGHAPGAVCLYASDLGCVFTGDTLFQGGPGATGRSFSDADLIVESIRTTLF
CCEEEEEECCCCCCCEEEEEECCCCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHEE
ALPDDTVVHTGHGADTTIGAERVGLGS
ECCCCCEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]