BacMap

Definition	Nocardioides sp. JS614 chromosome, complete genome.
Accession	NC_008699
Length	4,985,871

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The map label for this gene is gabD2 [H]

Identifier: 119717855

GI number: 119717855

Start: 3852802

End: 3854424

Strand: Reverse

Name: gabD2 [H]

Synonym: Noca_3633

Alternate gene names: 119717855

Gene position: 3854424-3852802 (Counterclockwise)

Preceding gene: 119717856

Following gene: 119717854

Centisome position: 77.31

GC content: 72.52

Gene sequence:

>1623_bases
ATGAGCGCCCAGAGCCCGACTCCCGCCGGCGGCCCGGTCGTCGAAGGCCCGTTCGACCCCGAGCACGACCCGACGGCGGC
CTACGCCCTCGAGCCGGAGTACGCCGACGCGCTCACCCGGCGCCTGGTCGCCACCGCCGGCCGCTCGGTCCAGGTCCGGT
CCCCGCTCAACGACGCCCCGCTCGGGCACGTCCCGCAGTCCACCGTCGAGGACGTCGCGACGGCATTCGAGCGGGCCCGA
AGGGCGCAGGTCGCCTGGGCCCGCACCCCGCTCGCGGAGCGCTCGGCGATCCTGCTGCGGCTGCACGACCTGGTGCTCGA
CCACCAGGACGAGATCATCGACCTGATCGTCTGGGAGAGCGGCAAGGCCCGCAAGCACGCCTTCGACGAGCCGCTGCACG
TCGCGCTGACCGCCCGCTACTACGCGCGCACCGCCAAGCGGCACCTCGGCACCGAGCGCAAGATCGGGGTCGTGCCCGGC
CTGACCCGGGTCGAGGTCAACCACAACCCGGTCGGCGTCGTCGGGATCATCTCGCCCTGGAACTACCCCTTCAACCTGGC
GCTGATCGACGGCATCGCCGCGCTGATGGCCGGCAACGCGGTCGTCGCCAAGCCGGACTCGCAGACGATGCTCTCCGCGC
TGCTCGGTGCCCGGCTGCTCGATCAGGCCGGCCTGCCGCGCGACCTGTGGCAGGTCGTCGCCGGCCCGGGCGCGGAGATC
GGCGGCGCGATCGTCGAGCGGGCCGACTACGTCTGCTTCACCGGCTCGACCGCCACCGGCCGGTCGATCGCGAAGGGCTG
CGCGGACCGGCTGATCGGCTGCTCGCTCGAGCTCGGCGGCAAGAACCCGCTCCTCGTGCTCCGCGACGCCGACCTCGAGA
AGGCCGCGGAGGGCGCCGTACGCGCCTCGTTCTCCAACGCCGGCCAGTTGTGCGTCTCGATGGAGCGGATCTTCGTCGCC
GACCAGCTCTACGACCGGTTCGTGGACCGGTTCGTGGCCCGCACCGAGGCGCTGACCCTCGGCGCGACCCTGGACTGGGG
CAACGACATGGGCCCGCTGATCTCCCAGGCCCAGCTCGACACGGTCACCGCCCACGTCGACGACGCGGTCGCCAAGGGCG
CCCGGGTGCTCGCCGGCGGCAAGGCCCGCCCCGACCTCGGCCCGTACTTCTTCGAGCCGACCATCCTCGAGGGGGTCAGC
CCCGACATGACCTGCTTCGGCAAGGAGACCTTCGGGCCGGTCGTGTCGCTCTACCGGTTCCACGACGAGGTCGACGCCGT
CGCCCGGGCCAACGACGGCGAGTACGGCCTGAACGCCTCGGTCTACAGCCGCGACGGCGCCCGGGCGCGGCTGATCGCCC
GGCACCTGCGCTGCGGGACCGTCAACGTCAACGAGGCCTTCGCCGCGACCTTCGCGAGCATCGACGCCCCGATGGGCGGC
ATGCGCGAGTCCGGCGCCGGCCGCCGCCAGGGCGCGATGGGCGTCCGGCGGTTCACCGAGACCCAGGCCGTCGCGACCCA
GCGGCTGATCCGGTTCGCCCCGCAGTACGGCATGTCCGACCAGATGTACGCCAAGGTCATGAACGCCAACCTGCGCCTGA
TGAAGAAGGTGGGACGCGCATGA

Upstream 100 bases:

>100_bases
CGACCGCCGACCGTCTTGACATTCGGACGCCATGTGTAAAAACCCACACGAGGCTACCGAAGGGTAGTTTCCGAGACGCG
CGTCACATACCCTCGCCGGT

Downstream 100 bases:

>100_bases
GGTTCGACTACGACGTGCTGGTGGTGGGGTCCGGCTTCGGCGGGTCCGTGACGGCGCTGCGCCTGACCGAGAAGGGCTAC
CGGGTCGGCGTGATCGAGGC

Product: succinic semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSADH; SSDH [H]

Number of amino acids: Translated: 540; Mature: 539

Protein sequence:

>540_residues
MSAQSPTPAGGPVVEGPFDPEHDPTAAYALEPEYADALTRRLVATAGRSVQVRSPLNDAPLGHVPQSTVEDVATAFERAR
RAQVAWARTPLAERSAILLRLHDLVLDHQDEIIDLIVWESGKARKHAFDEPLHVALTARYYARTAKRHLGTERKIGVVPG
LTRVEVNHNPVGVVGIISPWNYPFNLALIDGIAALMAGNAVVAKPDSQTMLSALLGARLLDQAGLPRDLWQVVAGPGAEI
GGAIVERADYVCFTGSTATGRSIAKGCADRLIGCSLELGGKNPLLVLRDADLEKAAEGAVRASFSNAGQLCVSMERIFVA
DQLYDRFVDRFVARTEALTLGATLDWGNDMGPLISQAQLDTVTAHVDDAVAKGARVLAGGKARPDLGPYFFEPTILEGVS
PDMTCFGKETFGPVVSLYRFHDEVDAVARANDGEYGLNASVYSRDGARARLIARHLRCGTVNVNEAFAATFASIDAPMGG
MRESGAGRRQGAMGVRRFTETQAVATQRLIRFAPQYGMSDQMYAKVMNANLRLMKKVGRA

Sequences:

>Translated_540_residues
MSAQSPTPAGGPVVEGPFDPEHDPTAAYALEPEYADALTRRLVATAGRSVQVRSPLNDAPLGHVPQSTVEDVATAFERAR
RAQVAWARTPLAERSAILLRLHDLVLDHQDEIIDLIVWESGKARKHAFDEPLHVALTARYYARTAKRHLGTERKIGVVPG
LTRVEVNHNPVGVVGIISPWNYPFNLALIDGIAALMAGNAVVAKPDSQTMLSALLGARLLDQAGLPRDLWQVVAGPGAEI
GGAIVERADYVCFTGSTATGRSIAKGCADRLIGCSLELGGKNPLLVLRDADLEKAAEGAVRASFSNAGQLCVSMERIFVA
DQLYDRFVDRFVARTEALTLGATLDWGNDMGPLISQAQLDTVTAHVDDAVAKGARVLAGGKARPDLGPYFFEPTILEGVS
PDMTCFGKETFGPVVSLYRFHDEVDAVARANDGEYGLNASVYSRDGARARLIARHLRCGTVNVNEAFAATFASIDAPMGG
MRESGAGRRQGAMGVRRFTETQAVATQRLIRFAPQYGMSDQMYAKVMNANLRLMKKVGRA
>Mature_539_residues
SAQSPTPAGGPVVEGPFDPEHDPTAAYALEPEYADALTRRLVATAGRSVQVRSPLNDAPLGHVPQSTVEDVATAFERARR
AQVAWARTPLAERSAILLRLHDLVLDHQDEIIDLIVWESGKARKHAFDEPLHVALTARYYARTAKRHLGTERKIGVVPGL
TRVEVNHNPVGVVGIISPWNYPFNLALIDGIAALMAGNAVVAKPDSQTMLSALLGARLLDQAGLPRDLWQVVAGPGAEIG
GAIVERADYVCFTGSTATGRSIAKGCADRLIGCSLELGGKNPLLVLRDADLEKAAEGAVRASFSNAGQLCVSMERIFVAD
QLYDRFVDRFVARTEALTLGATLDWGNDMGPLISQAQLDTVTAHVDDAVAKGARVLAGGKARPDLGPYFFEPTILEGVSP
DMTCFGKETFGPVVSLYRFHDEVDAVARANDGEYGLNASVYSRDGARARLIARHLRCGTVNVNEAFAATFASIDAPMGGM
RESGAGRRQGAMGVRRFTETQAVATQRLIRFAPQYGMSDQMYAKVMNANLRLMKKVGRA

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. Although it has succinate semialdehyde dehydrogenase activity, is likely to act physiologically on a different aldehyde(s) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI25777730, Length=491, Percent_Identity=34.0122199592668, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI25777732, Length=489, Percent_Identity=35.1738241308793, Blast_Score=248, Evalue=8e-66,
Organism=Homo sapiens, GI115387104, Length=448, Percent_Identity=33.7053571428571, Blast_Score=246, Evalue=5e-65,
Organism=Homo sapiens, GI21361176, Length=471, Percent_Identity=35.031847133758, Blast_Score=243, Evalue=3e-64,
Organism=Homo sapiens, GI4507229, Length=466, Percent_Identity=35.1931330472103, Blast_Score=242, Evalue=7e-64,
Organism=Homo sapiens, GI12007648, Length=456, Percent_Identity=33.3333333333333, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI25777724, Length=472, Percent_Identity=34.1101694915254, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI21614513, Length=441, Percent_Identity=34.6938775510204, Blast_Score=240, Evalue=3e-63,
Organism=Homo sapiens, GI153266822, Length=483, Percent_Identity=32.9192546583851, Blast_Score=235, Evalue=9e-62,
Organism=Homo sapiens, GI238814322, Length=433, Percent_Identity=33.4872979214781, Blast_Score=234, Evalue=2e-61,
Organism=Homo sapiens, GI25777721, Length=479, Percent_Identity=34.0292275574113, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI25777728, Length=421, Percent_Identity=35.3919239904988, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI25777726, Length=469, Percent_Identity=32.6226012793177, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI310128093, Length=466, Percent_Identity=28.755364806867, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI188035924, Length=469, Percent_Identity=28.997867803838, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI310128103, Length=466, Percent_Identity=28.755364806867, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI25952152, Length=449, Percent_Identity=30.0668151447661, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI301500698, Length=287, Percent_Identity=34.1463414634146, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI310128091, Length=460, Percent_Identity=28.4782608695652, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI11095441, Length=470, Percent_Identity=25.9574468085106, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI206597441, Length=442, Percent_Identity=27.1493212669683, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI206597439, Length=442, Percent_Identity=27.1493212669683, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI22907049, Length=442, Percent_Identity=27.1493212669683, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI4557303, Length=436, Percent_Identity=25.6880733944954, Blast_Score=142, Evalue=1e-33,
Organism=Homo sapiens, GI73466520, Length=436, Percent_Identity=25.6880733944954, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI238859541, Length=457, Percent_Identity=29.1028446389497, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI25777736, Length=457, Percent_Identity=29.1028446389497, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI25777734, Length=457, Percent_Identity=29.1028446389497, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI310128089, Length=329, Percent_Identity=30.0911854103343, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI71773324, Length=379, Percent_Identity=28.7598944591029, Blast_Score=136, Evalue=6e-32,
Organism=Homo sapiens, GI4502043, Length=379, Percent_Identity=28.7598944591029, Blast_Score=136, Evalue=6e-32,
Organism=Homo sapiens, GI238814371, Length=379, Percent_Identity=28.7598944591029, Blast_Score=136, Evalue=6e-32,
Organism=Homo sapiens, GI73695881, Length=355, Percent_Identity=28.4507042253521, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI73695879, Length=355, Percent_Identity=28.4507042253521, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI310128097, Length=258, Percent_Identity=31.0077519379845, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI310128095, Length=315, Percent_Identity=28.8888888888889, Blast_Score=124, Evalue=3e-28,
Organism=Homo sapiens, GI310128087, Length=466, Percent_Identity=25.9656652360515, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI223972651, Length=457, Percent_Identity=28.2275711159737, Blast_Score=105, Evalue=8e-23,
Organism=Escherichia coli, GI1789015, Length=466, Percent_Identity=37.7682403433476, Blast_Score=296, Evalue=3e-81,
Organism=Escherichia coli, GI87081896, Length=449, Percent_Identity=37.1937639198218, Blast_Score=245, Evalue=5e-66,
Organism=Escherichia coli, GI1787684, Length=462, Percent_Identity=34.6320346320346, Blast_Score=239, Evalue=3e-64,
Organism=Escherichia coli, GI1786504, Length=486, Percent_Identity=33.7448559670782, Blast_Score=229, Evalue=5e-61,
Organism=Escherichia coli, GI87082295, Length=494, Percent_Identity=34.0080971659919, Blast_Score=225, Evalue=6e-60,
Organism=Escherichia coli, GI1787558, Length=468, Percent_Identity=31.8376068376068, Blast_Score=214, Evalue=1e-56,
Organism=Escherichia coli, GI1787715, Length=471, Percent_Identity=32.484076433121, Blast_Score=209, Evalue=5e-55,
Organism=Escherichia coli, GI87081926, Length=460, Percent_Identity=30.4347826086957, Blast_Score=204, Evalue=2e-53,
Organism=Escherichia coli, GI1788042, Length=463, Percent_Identity=30.4535637149028, Blast_Score=154, Evalue=2e-38,
Organism=Escherichia coli, GI1787250, Length=446, Percent_Identity=28.2511210762332, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI1787653, Length=289, Percent_Identity=25.9515570934256, Blast_Score=79, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI133930964, Length=477, Percent_Identity=34.1719077568134, Blast_Score=250, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI17562198, Length=473, Percent_Identity=34.2494714587738, Blast_Score=248, Evalue=6e-66,
Organism=Caenorhabditis elegans, GI17534119, Length=485, Percent_Identity=33.6082474226804, Blast_Score=242, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI25144435, Length=495, Percent_Identity=33.3333333333333, Blast_Score=234, Evalue=9e-62,
Organism=Caenorhabditis elegans, GI25143876, Length=469, Percent_Identity=32.1961620469083, Blast_Score=224, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI25143874, Length=469, Percent_Identity=32.1961620469083, Blast_Score=224, Evalue=7e-59,
Organism=Caenorhabditis elegans, GI32564736, Length=424, Percent_Identity=35.6132075471698, Blast_Score=218, Evalue=8e-57,
Organism=Caenorhabditis elegans, GI17551164, Length=470, Percent_Identity=31.7021276595745, Blast_Score=205, Evalue=6e-53,
Organism=Caenorhabditis elegans, GI71995606, Length=476, Percent_Identity=30.672268907563, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI115534176, Length=466, Percent_Identity=30.2575107296137, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI71995613, Length=415, Percent_Identity=30.6024096385542, Blast_Score=176, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI17564084, Length=442, Percent_Identity=28.9592760180996, Blast_Score=166, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI25146394, Length=439, Percent_Identity=27.3348519362187, Blast_Score=152, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI32566756, Length=439, Percent_Identity=27.3348519362187, Blast_Score=152, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI25146391, Length=439, Percent_Identity=27.3348519362187, Blast_Score=152, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI71986308, Length=479, Percent_Identity=24.6346555323591, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17534447, Length=474, Percent_Identity=27.2151898734177, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI32564151, Length=425, Percent_Identity=27.2941176470588, Blast_Score=123, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI115532534, Length=331, Percent_Identity=29.607250755287, Blast_Score=115, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6319478, Length=463, Percent_Identity=33.0453563714903, Blast_Score=246, Evalue=7e-66,
Organism=Saccharomyces cerevisiae, GI6320917, Length=467, Percent_Identity=32.5481798715203, Blast_Score=232, Evalue=9e-62,
Organism=Saccharomyces cerevisiae, GI6324950, Length=465, Percent_Identity=32.0430107526882, Blast_Score=226, Evalue=8e-60,
Organism=Saccharomyces cerevisiae, GI6325196, Length=474, Percent_Identity=32.2784810126582, Blast_Score=223, Evalue=7e-59,
Organism=Saccharomyces cerevisiae, GI6323821, Length=481, Percent_Identity=31.3929313929314, Blast_Score=222, Evalue=1e-58,
Organism=Saccharomyces cerevisiae, GI6323822, Length=481, Percent_Identity=31.6008316008316, Blast_Score=221, Evalue=3e-58,
Organism=Saccharomyces cerevisiae, GI6321828, Length=487, Percent_Identity=30.8008213552361, Blast_Score=199, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6321826, Length=466, Percent_Identity=26.8240343347639, Blast_Score=128, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6323757, Length=502, Percent_Identity=23.7051792828685, Blast_Score=98, Evalue=3e-21,
Organism=Drosophila melanogaster, GI281362580, Length=474, Percent_Identity=35.8649789029536, Blast_Score=290, Evalue=1e-78,
Organism=Drosophila melanogaster, GI62472918, Length=474, Percent_Identity=35.8649789029536, Blast_Score=290, Evalue=1e-78,
Organism=Drosophila melanogaster, GI62472926, Length=474, Percent_Identity=35.8649789029536, Blast_Score=290, Evalue=1e-78,
Organism=Drosophila melanogaster, GI62472936, Length=474, Percent_Identity=35.8649789029536, Blast_Score=290, Evalue=1e-78,
Organism=Drosophila melanogaster, GI21356737, Length=474, Percent_Identity=35.8649789029536, Blast_Score=290, Evalue=1e-78,
Organism=Drosophila melanogaster, GI20129399, Length=472, Percent_Identity=34.5338983050847, Blast_Score=252, Evalue=6e-67,
Organism=Drosophila melanogaster, GI24585660, Length=472, Percent_Identity=31.7796610169492, Blast_Score=243, Evalue=3e-64,
Organism=Drosophila melanogaster, GI24650465, Length=495, Percent_Identity=31.9191919191919, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24666674, Length=466, Percent_Identity=26.1802575107296, Blast_Score=156, Evalue=4e-38,
Organism=Drosophila melanogaster, GI281360303, Length=453, Percent_Identity=25.1655629139073, Blast_Score=144, Evalue=2e-34,
Organism=Drosophila melanogaster, GI45552499, Length=446, Percent_Identity=25.7847533632287, Blast_Score=143, Evalue=3e-34,
Organism=Drosophila melanogaster, GI281360301, Length=453, Percent_Identity=24.9448123620309, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24638876, Length=491, Percent_Identity=24.6435845213849, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24638878, Length=491, Percent_Identity=24.6435845213849, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI281360299, Length=446, Percent_Identity=25.5605381165919, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI281360297, Length=446, Percent_Identity=25.5605381165919, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI281360295, Length=446, Percent_Identity=25.5605381165919, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24586250, Length=446, Percent_Identity=25.5605381165919, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24668425, Length=460, Percent_Identity=24.3478260869565, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24668417, Length=460, Percent_Identity=24.3478260869565, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24668413, Length=460, Percent_Identity=24.3478260869565, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI281360293, Length=265, Percent_Identity=25.6603773584906, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI28574525, Length=463, Percent_Identity=23.7580993520518, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28571806, Length=513, Percent_Identity=23.0019493177388, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI28571798, Length=513, Percent_Identity=23.0019493177388, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI28571796, Length=513, Percent_Identity=23.0019493177388, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI28571794, Length=513, Percent_Identity=23.0019493177388, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI28571802, Length=513, Percent_Identity=23.0019493177388, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI28571800, Length=513, Percent_Identity=23.0019493177388, Blast_Score=82, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 58041; Mature: 57910

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQSPTPAGGPVVEGPFDPEHDPTAAYALEPEYADALTRRLVATAGRSVQVRSPLNDAP
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCCCCCCC
LGHVPQSTVEDVATAFERARRAQVAWARTPLAERSAILLRLHDLVLDHQDEIIDLIVWES
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
GKARKHAFDEPLHVALTARYYARTAKRHLGTERKIGVVPGLTRVEVNHNPVGVVGIISPW
CCCHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCEECCCCCEEEEECCCCEEEEEEECCC
NYPFNLALIDGIAALMAGNAVVAKPDSQTMLSALLGARLLDQAGLPRDLWQVVAGPGAEI
CCCEEHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHH
GGAIVERADYVCFTGSTATGRSIAKGCADRLIGCSLELGGKNPLLVLRDADLEKAAEGAV
HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCCCEEEEECCCHHHHHHHHH
RASFSNAGQLCVSMERIFVADQLYDRFVDRFVARTEALTLGATLDWGNDMGPLISQAQLD
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHH
TVTAHVDDAVAKGARVLAGGKARPDLGPYFFEPTILEGVSPDMTCFGKETFGPVVSLYRF
HHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHCCCCCCCEECCCHHHHHHHHHHHH
HDEVDAVARANDGEYGLNASVYSRDGARARLIARHLRCGTVNVNEAFAATFASIDAPMGG
HHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
MRESGAGRRQGAMGVRRFTETQAVATQRLIRFAPQYGMSDQMYAKVMNANLRLMKKVGRA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHCCC
>Mature Secondary Structure 
SAQSPTPAGGPVVEGPFDPEHDPTAAYALEPEYADALTRRLVATAGRSVQVRSPLNDAP
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCCCCCCC
LGHVPQSTVEDVATAFERARRAQVAWARTPLAERSAILLRLHDLVLDHQDEIIDLIVWES
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
GKARKHAFDEPLHVALTARYYARTAKRHLGTERKIGVVPGLTRVEVNHNPVGVVGIISPW
CCCHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCEECCCCCEEEEECCCCEEEEEEECCC
NYPFNLALIDGIAALMAGNAVVAKPDSQTMLSALLGARLLDQAGLPRDLWQVVAGPGAEI
CCCEEHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHH
GGAIVERADYVCFTGSTATGRSIAKGCADRLIGCSLELGGKNPLLVLRDADLEKAAEGAV
HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCCCEEEEECCCHHHHHHHHH
RASFSNAGQLCVSMERIFVADQLYDRFVDRFVARTEALTLGATLDWGNDMGPLISQAQLD
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHH
TVTAHVDDAVAKGARVLAGGKARPDLGPYFFEPTILEGVSPDMTCFGKETFGPVVSLYRF
HHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHCCCCCCCEECCCHHHHHHHHHHHH
HDEVDAVARANDGEYGLNASVYSRDGARARLIARHLRCGTVNVNEAFAATFASIDAPMGG
HHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
MRESGAGRRQGAMGVRRFTETQAVATQRLIRFAPQYGMSDQMYAKVMNANLRLMKKVGRA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA